RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 GPR161Q8N6U8 529 aaKnown RBP9.49□□□□□ -0.89
SNRPF-202ENST00000549580 BAP1Q92560 729 aa9.49□□□□□ -0.89
SNRPF-202ENST00000549580 DNMT3AQ9Y6K1 912 aaPredicted RBP9.49□□□□□ -0.89
SNRPF-202ENST00000549580 MAN1A2O60476 641 aa9.48□□□□□ -0.89
SNRPF-202ENST00000549580 ZNF511Q8NB15 262 aa9.48□□□□□ -0.89
SNRPF-202ENST00000549580 IGHA1P01876 353 aa9.47□□□□□ -0.89
SNRPF-202ENST00000549580 MS4A1P11836 297 aa9.47□□□□□ -0.89
SNRPF-202ENST00000549580 GPAT2Q6NUI2 795 aa9.47□□□□□ -0.89
SNRPF-202ENST00000549580 PTPRNQ16849 979 aa9.46□□□□□ -0.9
SNRPF-202ENST00000549580 ZNF385CQ66K41 422 aaPredicted RBP9.46□□□□□ -0.9
SNRPF-202ENST00000549580 CNTNAP3BQ96NU0 1288 aa9.46□□□□□ -0.9
SNRPF-202ENST00000549580 CNTNAP3Q9BZ76 1288 aa9.46□□□□□ -0.9
SNRPF-202ENST00000549580 EVA1BQ9NVM1 165 aa9.46□□□□□ -0.9
SNRPF-202ENST00000549580 ZFAND3Q9H8U3 227 aa9.45□□□□□ -0.9
SNRPF-202ENST00000549580 MAP2K5Q13163 448 aa9.44□□□□□ -0.9
SNRPF-202ENST00000549580 C6orf118Q5T5N4 469 aa9.44□□□□□ -0.9
SNRPF-202ENST00000549580 PCDHGC3Q9UN70 934 aa9.44□□□□□ -0.9
SNRPF-202ENST00000549580 IRF6O14896 467 aa9.43□□□□□ -0.9
SNRPF-202ENST00000549580 ZIC2O95409 532 aaPredicted RBP9.43□□□□□ -0.9
SNRPF-202ENST00000549580 KCNH2Q12809 1159 aa9.43□□□□□ -0.9
SNRPF-202ENST00000549580 ITPKCQ96DU7 683 aa9.43□□□□□ -0.9
SNRPF-202ENST00000549580 DNMT3LQ9UJW3 386 aa9.43□□□□□ -0.9
SNRPF-202ENST00000549580 SOS2Q07890 1332 aaPredicted RBP9.42□□□□□ -0.9
SNRPF-202ENST00000549580 CDK15Q96Q40 435 aa9.42□□□□□ -0.9
SNRPF-202ENST00000549580 IRS1P35568 1242 aa9.4□□□□□ -0.9
SNRPF-202ENST00000549580 FOXK2Q01167 660 aa9.4□□□□□ -0.9
SNRPF-202ENST00000549580 COL25A1Q9BXS0 654 aaPredicted RBP9.4□□□□□ -0.9
SNRPF-202ENST00000549580 KRTAP4-8Q9BYQ9 185 aa9.4□□□□□ -0.9
SNRPF-202ENST00000549580 ARHGEF15O94989 841 aa9.39□□□□□ -0.91
SNRPF-202ENST00000549580 NR3C2P08235 984 aa9.39□□□□□ -0.91
SNRPF-202ENST00000549580 LINC00528Q8N1L1 170 aa9.39□□□□□ -0.91
SNRPF-202ENST00000549580 MEIOBQ8N635 442 aa9.39□□□□□ -0.91
SNRPF-202ENST00000549580 FDX1P10109 184 aa9.38□□□□□ -0.91
SNRPF-202ENST00000549580 BMP2P12643 396 aa9.38□□□□□ -0.91
SNRPF-202ENST00000549580 RNFT1Q5M7Z0 435 aa9.38□□□□□ -0.91
SNRPF-202ENST00000549580 SVOPQ8N4V2 548 aa9.38□□□□□ -0.91
SNRPF-202ENST00000549580 FAM174AQ8TBP5 190 aa9.38□□□□□ -0.91
SNRPF-202ENST00000549580 WHAMMQ8TF30 809 aa9.38□□□□□ -0.91
SNRPF-202ENST00000549580 CCDC102AQ96A19 550 aa9.38□□□□□ -0.91
SNRPF-202ENST00000549580 C6orf229H3BNL8 230 aa9.37□□□□□ -0.91
SNRPF-202ENST00000549580 SLURP2P0DP57 97 aa9.37□□□□□ -0.91
SNRPF-202ENST00000549580 KANK3Q6NY19 840 aa9.37□□□□□ -0.91
SNRPF-202ENST00000549580 NANOS1Q8WY41 292 aaKnown RBP9.37□□□□□ -0.91
SNRPF-202ENST00000549580 FAM217BQ9NTX9 383 aaPredicted RBP9.37□□□□□ -0.91
SNRPF-202ENST00000549580 NR5A1Q13285 461 aa9.35□□□□□ -0.91
SNRPF-202ENST00000549580 NUTM1Q86Y26 1132 aa9.35□□□□□ -0.91
SNRPF-202ENST00000549580 GRM5P41594 1212 aa9.34□□□□□ -0.91
SNRPF-202ENST00000549580 GPCPD1Q9NPB8 672 aa9.34□□□□□ -0.91
SNRPF-202ENST00000549580 MINK1Q8N4C8 1332 aaPredicted RBP9.33□□□□□ -0.92
SNRPF-202ENST00000549580 ADAM23O75077 832 aa9.33□□□□□ -0.92
SNRPF-202ENST00000549580 UPP2O95045 317 aa9.33□□□□□ -0.92
SNRPF-202ENST00000549580 PRKCSHP14314 528 aaPredicted RBP9.33□□□□□ -0.92
SNRPF-202ENST00000549580 NDUFV2P19404 249 aa9.33□□□□□ -0.92
SNRPF-202ENST00000549580 PTSQ03393 145 aa9.33□□□□□ -0.92
SNRPF-202ENST00000549580 DESI1Q6ICB0 168 aa9.33□□□□□ -0.92
SNRPF-202ENST00000549580 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.32□□□□□ -0.92
SNRPF-202ENST00000549580 PRR7Q8TB68 274 aa9.32□□□□□ -0.92
SNRPF-202ENST00000549580 FOXJ1Q92949 421 aa9.32□□□□□ -0.92
SNRPF-202ENST00000549580 ARID5BQ14865 1188 aa9.31□□□□□ -0.92
SNRPF-202ENST00000549580 CLCN1P35523 988 aa9.3□□□□□ -0.92
SNRPF-202ENST00000549580 C4orf48Q5BLP8 95 aa9.29□□□□□ -0.92
SNRPF-202ENST00000549580 MOXD2PA6NHM9 499 aa9.28□□□□□ -0.92
SNRPF-202ENST00000549580 SPTLC1O15269 473 aa9.28□□□□□ -0.92
SNRPF-202ENST00000549580 MARSP56192 900 aaKnown RBP9.28□□□□□ -0.92
SNRPF-202ENST00000549580 CCDC155Q8N6L0 562 aa9.28□□□□□ -0.92
SNRPF-202ENST00000549580 SPIRE2Q8WWL2 714 aa9.28□□□□□ -0.92
SNRPF-202ENST00000549580 SCARF2Q96GP6 870 aaPredicted RBP9.28□□□□□ -0.92
SNRPF-202ENST00000549580 TTLL8A6PVC2 850 aa9.27□□□□□ -0.93
SNRPF-202ENST00000549580 TSEN34Q9BSV6 310 aaKnown RBP9.27□□□□□ -0.93
SNRPF-202ENST00000549580 ITGB2P05107 769 aa9.26□□□□□ -0.93
SNRPF-202ENST00000549580 KRI1Q8N9T8 703 aaKnown RBP9.26□□□□□ -0.93
SNRPF-202ENST00000549580 SLC35F4A4IF30 521 aa9.25□□□□□ -0.93
SNRPF-202ENST00000549580 SSTR3P32745 418 aaPredicted RBP9.25□□□□□ -0.93
SNRPF-202ENST00000549580 PLA2G4EQ3MJ16 856 aa9.25□□□□□ -0.93
SNRPF-202ENST00000549580 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.24□□□□□ -0.93
SNRPF-202ENST00000549580 F12P00748 615 aaPredicted RBP9.24□□□□□ -0.93
SNRPF-202ENST00000549580 CTHP32929 405 aa9.24□□□□□ -0.93
SNRPF-202ENST00000549580 MTMR2Q13614 643 aa9.24□□□□□ -0.93
SNRPF-202ENST00000549580 LYPD8Q6UX82 237 aa9.24□□□□□ -0.93
SNRPF-202ENST00000549580 SPOCK3Q9BQ16 436 aa9.24□□□□□ -0.93
SNRPF-202ENST00000549580 SPDYE5A6NIY4 337 aa9.23□□□□□ -0.93
SNRPF-202ENST00000549580 MSTNO14793 375 aa9.23□□□□□ -0.93
SNRPF-202ENST00000549580 LYPD4Q6UWN0 246 aa9.23□□□□□ -0.93
SNRPF-202ENST00000549580 KRTAP9-2Q9BYQ4 174 aa9.23□□□□□ -0.93
SNRPF-202ENST00000549580 MAP10Q9P2G4 905 aa9.23□□□□□ -0.93
SNRPF-202ENST00000549580 ITGA6P23229 1130 aa9.22□□□□□ -0.93
SNRPF-202ENST00000549580 TPRNQ4KMQ1 711 aa9.22□□□□□ -0.93
SNRPF-202ENST00000549580 FIGNL2A6NMB9 653 aa9.21□□□□□ -0.94
SNRPF-202ENST00000549580 PROCP04070 461 aa9.21□□□□□ -0.94
SNRPF-202ENST00000549580 FSHRP23945 695 aa9.21□□□□□ -0.94
SNRPF-202ENST00000549580 VWA5B2Q8N398 1253 aa9.21□□□□□ -0.94
SNRPF-202ENST00000549580 C1QTNF2Q9BXJ5 285 aa9.21□□□□□ -0.94
SNRPF-202ENST00000549580 ADAMTS2O95450 1211 aa9.2□□□□□ -0.94
SNRPF-202ENST00000549580 MAP4K5Q9Y4K4 846 aa9.2□□□□□ -0.94
SNRPF-202ENST00000549580 SV2AQ7L0J3 742 aa9.19□□□□□ -0.94
SNRPF-202ENST00000549580 BPHLQ86WA6 291 aaPredicted RBP9.19□□□□□ -0.94
SNRPF-202ENST00000549580 DCAF5Q96JK2 942 aa9.19□□□□□ -0.94
SNRPF-202ENST00000549580 SPINT1O43278 529 aa9.18□□□□□ -0.94
SNRPF-202ENST00000549580 PCDHB15Q9Y5E8 787 aa9.18□□□□□ -0.94
SNRPF-202ENST00000549580 EMILIN1Q9Y6C2 1016 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms