RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 ZBTB3Q9H5J0 574 aa8.94□□□□□ -0.98
DEPDC4-205ENST00000548313 MTMR2Q13614 643 aa8.93□□□□□ -0.98
DEPDC4-205ENST00000548313 PPP2R2DQ66LE6 453 aa8.93□□□□□ -0.98
DEPDC4-205ENST00000548313 USB1Q9BQ65 265 aaKnown RBP8.93□□□□□ -0.98
DEPDC4-205ENST00000548313 C6orf229H3BNL8 230 aa8.92□□□□□ -0.98
DEPDC4-205ENST00000548313 HRCP23327 699 aa8.92□□□□□ -0.98
DEPDC4-205ENST00000548313 NUTM2BA6NNL0 878 aaPredicted RBP8.91□□□□□ -0.98
DEPDC4-205ENST00000548313 NUTM2EB1AL46 878 aaPredicted RBP8.91□□□□□ -0.98
DEPDC4-205ENST00000548313 DXOO77932 396 aaKnown RBP8.91□□□□□ -0.98
DEPDC4-205ENST00000548313 CSPP1Q1MSJ5 1256 aa8.91□□□□□ -0.98
DEPDC4-205ENST00000548313 NUTM2DQ5VT03 806 aaPredicted RBP8.91□□□□□ -0.98
DEPDC4-205ENST00000548313 RETREG3Q86VR2 466 aa8.91□□□□□ -0.98
DEPDC4-205ENST00000548313 NUTM2AQ8IVF1 878 aaPredicted RBP8.91□□□□□ -0.98
DEPDC4-205ENST00000548313 HPS1Q92902 700 aa8.91□□□□□ -0.98
DEPDC4-205ENST00000548313 WNT7BP56706 349 aa8.9□□□□□ -0.98
DEPDC4-205ENST00000548313 QPCTQ16769 361 aa8.9□□□□□ -0.98
DEPDC4-205ENST00000548313 RC3H1Q5TC82 1133 aaKnown RBP8.89□□□□□ -0.99
DEPDC4-205ENST00000548313 SLC16A10Q8TF71 515 aa8.89□□□□□ -0.99
DEPDC4-205ENST00000548313 FAM181BA6NEQ2 426 aa8.88□□□□□ -0.99
DEPDC4-205ENST00000548313 TMEM259Q4ZIN3 620 aa8.88□□□□□ -0.99
DEPDC4-205ENST00000548313 CCDC24Q8N4L8 307 aa8.88□□□□□ -0.99
DEPDC4-205ENST00000548313 CABLES1Q8TDN4 633 aa8.88□□□□□ -0.99
DEPDC4-205ENST00000548313 RFC5P40937 340 aa8.87□□□□□ -0.99
DEPDC4-205ENST00000548313 RTL5Q5HYW3 569 aaPredicted RBP8.87□□□□□ -0.99
DEPDC4-205ENST00000548313 DESI1Q6ICB0 168 aa8.87□□□□□ -0.99
DEPDC4-205ENST00000548313 SYMPKQ92797 1274 aaKnown RBP8.87□□□□□ -0.99
DEPDC4-205ENST00000548313 LCE2CQ5TA81 110 aa8.86□□□□□ -0.99
DEPDC4-205ENST00000548313 PRR7Q8TB68 274 aa8.86□□□□□ -0.99
DEPDC4-205ENST00000548313 SKOR1P84550 965 aa8.85□□□□□ -0.99
DEPDC4-205ENST00000548313 ALDH1A1P00352 501 aa8.84□□□□□ -0.99
DEPDC4-205ENST00000548313 BANK1Q8NDB2 785 aa8.84□□□□□ -0.99
DEPDC4-205ENST00000548313 HELBQ8NG08 1087 aaPredicted RBP8.84□□□□□ -0.99
DEPDC4-205ENST00000548313 GTF3C3Q9Y5Q9 886 aa8.84□□□□□ -0.99
DEPDC4-205ENST00000548313 CFAP99D6REC4 459 aa8.83□□□□□ -1
DEPDC4-205ENST00000548313 FBXO31Q5XUX0 539 aaPredicted RBP8.83□□□□□ -1
DEPDC4-205ENST00000548313 NXF1Q9UBU9 619 aaKnown RBP8.83□□□□□ -1
DEPDC4-205ENST00000548313 NPAS3Q8IXF0 933 aa8.82□□□□□ -1
DEPDC4-205ENST00000548313 JUNDP17535 347 aa8.81□□□□□ -1
DEPDC4-205ENST00000548313 AP1G2O75843 785 aa8.8□□□□□ -1
DEPDC4-205ENST00000548313 LYPD8Q6UX82 237 aa8.8□□□□□ -1
DEPDC4-205ENST00000548313 IRF7Q92985 503 aa8.8□□□□□ -1
DEPDC4-205ENST00000548313 FLIIQ13045 1269 aa8.79□□□□□ -1
DEPDC4-205ENST00000548313 EHBP1Q8NDI1 1231 aa8.79□□□□□ -1
DEPDC4-205ENST00000548313 WASF2Q9Y6W5 498 aa8.79□□□□□ -1
DEPDC4-205ENST00000548313 SOCS7O14512 581 aa8.78□□□□□ -1
DEPDC4-205ENST00000548313 CAPN5O15484 640 aaPredicted RBP8.78□□□□□ -1
DEPDC4-205ENST00000548313 SIAH2O43255 324 aa8.78□□□□□ -1
DEPDC4-205ENST00000548313 CTDSPL2Q05D32 466 aa8.78□□□□□ -1
DEPDC4-205ENST00000548313 PTPRNQ16849 979 aa8.78□□□□□ -1
DEPDC4-205ENST00000548313 TSC1Q92574 1164 aa8.78□□□□□ -1
DEPDC4-205ENST00000548313 GMPRP36959 345 aa8.77□□□□□ -1.01
DEPDC4-205ENST00000548313 ZSCAN1Q8NBB4 408 aa8.77□□□□□ -1.01
DEPDC4-205ENST00000548313 USP17L8P0C7I0 530 aa8.76□□□□□ -1.01
DEPDC4-205ENST00000548313 NUDT12Q9BQG2 462 aa8.76□□□□□ -1.01
DEPDC4-205ENST00000548313 APBB1O00213 710 aa8.75□□□□□ -1.01
DEPDC4-205ENST00000548313 TRIM46Q7Z4K8 759 aa8.75□□□□□ -1.01
DEPDC4-205ENST00000548313 CCNYL3P0C7X3 344 aa8.74□□□□□ -1.01
DEPDC4-205ENST00000548313 BMP1P13497 986 aa8.74□□□□□ -1.01
DEPDC4-205ENST00000548313 PTCRAQ6ISU1 281 aaPredicted RBP8.74□□□□□ -1.01
DEPDC4-205ENST00000548313 EVA1BQ9NVM1 165 aa8.74□□□□□ -1.01
DEPDC4-205ENST00000548313 H3BM21 787 aa8.73□□□□□ -1.01
DEPDC4-205ENST00000548313 PER1O15534 1290 aaPredicted RBP8.73□□□□□ -1.01
DEPDC4-205ENST00000548313 MCM6Q14566 821 aa8.72□□□□□ -1.01
DEPDC4-205ENST00000548313 LRRN4Q8WUT4 740 aa8.72□□□□□ -1.01
DEPDC4-205ENST00000548313 SNRKQ9NRH2 765 aa8.72□□□□□ -1.01
DEPDC4-205ENST00000548313 F12P00748 615 aaPredicted RBP8.71□□□□□ -1.02
DEPDC4-205ENST00000548313 LORP23490 312 aaPredicted RBP8.71□□□□□ -1.02
DEPDC4-205ENST00000548313 SH3BP2P78314 561 aa8.71□□□□□ -1.02
DEPDC4-205ENST00000548313 KCNH2Q12809 1159 aa8.71□□□□□ -1.02
DEPDC4-205ENST00000548313 ERICH6Q7L0X2 663 aa8.71□□□□□ -1.02
DEPDC4-205ENST00000548313 PRM3Q9NNZ6 103 aa8.71□□□□□ -1.02
DEPDC4-205ENST00000548313 MTMR14Q8NCE2 650 aa8.7□□□□□ -1.02
DEPDC4-205ENST00000548313 CTHP32929 405 aa8.69□□□□□ -1.02
DEPDC4-205ENST00000548313 VEGFBP49765 207 aa8.69□□□□□ -1.02
DEPDC4-205ENST00000548313 PNMA1Q8ND90 353 aa8.69□□□□□ -1.02
DEPDC4-205ENST00000548313 ZFP42Q96MM3 310 aa8.69□□□□□ -1.02
DEPDC4-205ENST00000548313 ARMC2Q8NEN0 867 aa8.68□□□□□ -1.02
DEPDC4-205ENST00000548313 SCARF1Q14162 830 aa8.67□□□□□ -1.02
DEPDC4-205ENST00000548313 MPNDQ8N594 471 aa8.67□□□□□ -1.02
DEPDC4-205ENST00000548313 GJD4Q96KN9 370 aaPredicted RBP8.67□□□□□ -1.02
DEPDC4-205ENST00000548313 UNC93B1Q9H1C4 597 aa8.67□□□□□ -1.02
DEPDC4-205ENST00000548313 HMX1Q9NP08 348 aaPredicted RBP8.67□□□□□ -1.02
DEPDC4-205ENST00000548313 ERBB4Q15303 1308 aa8.66□□□□□ -1.02
DEPDC4-205ENST00000548313 VARSP26640 1264 aaKnown RBP8.66□□□□□ -1.02
DEPDC4-205ENST00000548313 NR6A1Q15406 480 aa8.66□□□□□ -1.02
DEPDC4-205ENST00000548313 TRIM34Q9BYJ4 488 aa8.66□□□□□ -1.02
DEPDC4-205ENST00000548313 MAP10Q9P2G4 905 aa8.66□□□□□ -1.02
DEPDC4-205ENST00000548313 UBTFP17480 764 aaKnown RBP8.65□□□□□ -1.02
DEPDC4-205ENST00000548313 MRPL14Q6P1L8 145 aaKnown RBP8.65□□□□□ -1.02
DEPDC4-205ENST00000548313 GPKOWQ92917 476 aaPredicted RBP eCLIP8.65□□□□□ -1.02
DEPDC4-205ENST00000548313 NDUFB9Q9Y6M9 179 aa8.65□□□□□ -1.02
DEPDC4-205ENST00000548313 ZC3H4Q9UPT8 1303 aaKnown RBP8.64□□□□□ -1.03
DEPDC4-205ENST00000548313 RAD21O60216 631 aa8.64□□□□□ -1.03
DEPDC4-205ENST00000548313 BAP1Q92560 729 aa8.64□□□□□ -1.03
DEPDC4-205ENST00000548313 NNTQ13423 1086 aa8.63□□□□□ -1.03
DEPDC4-205ENST00000548313 LINC01559Q495D7 138 aa8.63□□□□□ -1.03
DEPDC4-205ENST00000548313 ZNF511Q8NB15 262 aa8.63□□□□□ -1.03
DEPDC4-205ENST00000548313 EPS8L1Q8TE68 723 aa8.63□□□□□ -1.03
DEPDC4-205ENST00000548313 FKBPLQ9UIM3 349 aa8.63□□□□□ -1.03
DEPDC4-205ENST00000548313 TLL2Q9Y6L7 1015 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms