RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 CFAP53Q96M91 514 aa26.02■■□□□ 1.76
SKP2-208ENST00000546211 MTHFSP49914 203 aa26.01■■□□□ 1.75
SKP2-208ENST00000546211 COG3Q96JB2 828 aa26.01■■□□□ 1.75
SKP2-208ENST00000546211 PHF8Q9UPP1 1060 aa26.01■■□□□ 1.75
SKP2-208ENST00000546211 DMRT2Q9Y5R5 561 aa26.01■■□□□ 1.75
SKP2-208ENST00000546211 TTC21AQ8NDW8 1320 aa26■■□□□ 1.75
SKP2-208ENST00000546211 SCAF1Q9H7N4 1312 aaKnown RBP25.99■■□□□ 1.75
SKP2-208ENST00000546211 SSH2Q76I76 1423 aa25.99■■□□□ 1.75
SKP2-208ENST00000546211 DCCP43146 1447 aa25.98■■□□□ 1.75
SKP2-208ENST00000546211 ZBED9Q6R2W3 1325 aa25.98■■□□□ 1.75
SKP2-208ENST00000546211 ESCO1Q5FWF5 840 aa25.98■■□□□ 1.75
SKP2-208ENST00000546211 ATF3P18847 181 aa25.96■■□□□ 1.75
SKP2-208ENST00000546211 ZRANB1Q9UGI0 708 aa25.95■■□□□ 1.75
SKP2-208ENST00000546211 ADAMTS8Q9UP79 889 aa25.95■■□□□ 1.75
SKP2-208ENST00000546211 BLMP54132 1417 aaPredicted RBP25.94■■□□□ 1.74
SKP2-208ENST00000546211 ZNF335Q9H4Z2 1342 aaPredicted RBP25.94■■□□□ 1.74
SKP2-208ENST00000546211 MSH6P52701 1360 aa25.93■■□□□ 1.74
SKP2-208ENST00000546211 AATKQ6ZMQ8 1374 aa25.92■■□□□ 1.74
SKP2-208ENST00000546211 C1orf167Q5SNV9 1468 aa25.92■■□□□ 1.74
SKP2-208ENST00000546211 OVOS2A0A0J9YW53 1432 aa25.92■■□□□ 1.74
SKP2-208ENST00000546211 OVOS2Q6IE36 1432 aa25.92■■□□□ 1.74
SKP2-208ENST00000546211 CADPS2Q86UW7 1296 aa25.9■■□□□ 1.74
SKP2-208ENST00000546211 LRRC7Q96NW7 1537 aa25.9■■□□□ 1.74
SKP2-208ENST00000546211 ORAI2Q96SN7 254 aa25.89■■□□□ 1.73
SKP2-208ENST00000546211 SHPRHQ149N8 1683 aa25.89■■□□□ 1.73
SKP2-208ENST00000546211 KIF1AQ12756 1690 aa25.88■■□□□ 1.73
SKP2-208ENST00000546211 PSME1Q06323 249 aa25.88■■□□□ 1.73
SKP2-208ENST00000546211 POLKQ9UBT6 870 aa25.88■■□□□ 1.73
SKP2-208ENST00000546211 MST1RQ04912 1400 aa25.88■■□□□ 1.73
SKP2-208ENST00000546211 USP31Q70CQ4 1352 aa25.87■■□□□ 1.73
SKP2-208ENST00000546211 SMG6Q86US8 1419 aaKnown RBP25.86■■□□□ 1.73
SKP2-208ENST00000546211 XIRP1Q702N8 1843 aaKnown RBP25.86■■□□□ 1.73
SKP2-208ENST00000546211 PAK3O75914 559 aaPredicted RBP25.86■■□□□ 1.73
SKP2-208ENST00000546211 PIK3C2AO00443 1686 aa25.86■■□□□ 1.73
SKP2-208ENST00000546211 PNPLA6Q8IY17 1366 aa25.85■■□□□ 1.73
SKP2-208ENST00000546211 NUDCQ9Y266 331 aa25.85■■□□□ 1.73
SKP2-208ENST00000546211 COL3A1P02461 1466 aaPredicted RBP25.84■■□□□ 1.73
SKP2-208ENST00000546211 FBLN1P23142 703 aa25.84■■□□□ 1.73
SKP2-208ENST00000546211 PPM1GO15355 546 aaPredicted RBP25.83■■□□□ 1.73
SKP2-208ENST00000546211 MAP2P11137 1827 aaKnown RBP25.83■■□□□ 1.73
SKP2-208ENST00000546211 NLRP6P59044 892 aa25.82■■□□□ 1.72
SKP2-208ENST00000546211 ABTB2Q8N961 1025 aa25.82■■□□□ 1.72
SKP2-208ENST00000546211 FOXO3O43524 673 aa25.82■■□□□ 1.72
SKP2-208ENST00000546211 DIAPH1O60610 1272 aaKnown RBP25.82■■□□□ 1.72
SKP2-208ENST00000546211 EMILIN1Q9Y6C2 1016 aa25.82■■□□□ 1.72
SKP2-208ENST00000546211 CDK12Q9NYV4 1490 aaPredicted RBP25.81■■□□□ 1.72
SKP2-208ENST00000546211 SENP3-EIF4A1A0A087X0R7 540 aa25.81■■□□□ 1.72
SKP2-208ENST00000546211 RRS1Q15050 365 aaKnown RBP25.8■■□□□ 1.72
SKP2-208ENST00000546211 USP54Q70EL1 1684 aa25.79■■□□□ 1.72
SKP2-208ENST00000546211 CCDC146Q8IYE0 955 aa25.78■■□□□ 1.72
SKP2-208ENST00000546211 U2AF1L5P0DN76 240 aaPredicted RBP25.78■■□□□ 1.72
SKP2-208ENST00000546211 U2AF1Q01081 240 aaKnown RBP eCLIP25.78■■□□□ 1.72
SKP2-208ENST00000546211 U2SURPO15042 1029 aaKnown RBP25.77■■□□□ 1.72
SKP2-208ENST00000546211 SALL2Q9Y467 1007 aaPredicted RBP25.77■■□□□ 1.72
SKP2-208ENST00000546211 NUTM2GQ5VZR2 741 aa25.76■■□□□ 1.71
SKP2-208ENST00000546211 KRT28Q7Z3Y7 464 aa25.76■■□□□ 1.71
SKP2-208ENST00000546211 SOX12O15370 315 aa25.74■■□□□ 1.71
SKP2-208ENST00000546211 XPCQ01831 940 aaPredicted RBP25.73■■□□□ 1.71
SKP2-208ENST00000546211 RUNDC1Q96C34 613 aa25.73■■□□□ 1.71
SKP2-208ENST00000546211 MARF1Q9Y4F3 1742 aaKnown RBP25.72■■□□□ 1.71
SKP2-208ENST00000546211 TRPM3Q9HCF6 1732 aaPredicted RBP25.72■■□□□ 1.71
SKP2-208ENST00000546211 NPHP3Q7Z494 1330 aa25.71■■□□□ 1.71
SKP2-208ENST00000546211 APAF1O14727 1248 aa25.71■■□□□ 1.71
SKP2-208ENST00000546211 PDE3BQ13370 1112 aa25.71■■□□□ 1.71
SKP2-208ENST00000546211 NGEFQ8N5V2 710 aa25.71■■□□□ 1.71
SKP2-208ENST00000546211 PNNQ9H307 717 aaKnown RBP25.69■■□□□ 1.7
SKP2-208ENST00000546211 SLAIN2Q9P270 581 aa25.69■■□□□ 1.7
SKP2-208ENST00000546211 MAP3K19Q56UN5 1328 aa25.69■■□□□ 1.7
SKP2-208ENST00000546211 SBNO1A3KN83 1393 aa25.69■■□□□ 1.7
SKP2-208ENST00000546211 IL13P35225 146 aa25.69■■□□□ 1.7
SKP2-208ENST00000546211 FLT4P35916 1363 aa25.67■■□□□ 1.7
SKP2-208ENST00000546211 LMOD2Q6P5Q4 547 aa25.67■■□□□ 1.7
SKP2-208ENST00000546211 KCNH5Q8NCM2 988 aa25.67■■□□□ 1.7
SKP2-208ENST00000546211 PEAK1Q9H792 1746 aa25.67■■□□□ 1.7
SKP2-208ENST00000546211 AMPHP49418 695 aa25.66■■□□□ 1.7
SKP2-208ENST00000546211 BRINP3Q76B58 766 aa25.66■■□□□ 1.7
SKP2-208ENST00000546211 KIF24Q5T7B8 1368 aa25.66■■□□□ 1.7
SKP2-208ENST00000546211 IQSEC2Q5JU85 1478 aa25.65■■□□□ 1.7
SKP2-208ENST00000546211 FCHSD2O94868 740 aa25.65■■□□□ 1.7
SKP2-208ENST00000546211 GTF3C3Q9Y5Q9 886 aa25.65■■□□□ 1.7
SKP2-208ENST00000546211 TCP11L2Q8N4U5 519 aa25.64■■□□□ 1.69
SKP2-208ENST00000546211 MAPK8IP3Q9UPT6 1336 aa25.64■■□□□ 1.69
SKP2-208ENST00000546211 DDX17Q92841 729 aaKnown RBP25.63■■□□□ 1.69
SKP2-208ENST00000546211 ALS2Q96Q42 1657 aa25.62■■□□□ 1.69
SKP2-208ENST00000546211 EIF4A2Q14240 407 aaKnown RBP25.62■■□□□ 1.69
SKP2-208ENST00000546211 HSP90AB2PQ58FF8 381 aa25.62■■□□□ 1.69
SKP2-208ENST00000546211 SLIT3O75094 1523 aa25.62■■□□□ 1.69
SKP2-208ENST00000546211 NFAT5O94916 1531 aa25.62■■□□□ 1.69
SKP2-208ENST00000546211 PLEKHF1Q96S99 279 aa25.61■■□□□ 1.69
SKP2-208ENST00000546211 PXDNQ92626 1479 aa25.61■■□□□ 1.69
SKP2-208ENST00000546211 LTBP4Q8N2S1 1624 aa25.61■■□□□ 1.69
SKP2-208ENST00000546211 NEFMP07197 916 aa25.61■■□□□ 1.69
SKP2-208ENST00000546211 USP19O94966 1318 aa25.6■■□□□ 1.69
SKP2-208ENST00000546211 ZNF521Q96K83 1311 aa25.6■■□□□ 1.69
SKP2-208ENST00000546211 RTL1A6NKG5 1358 aa25.6■■□□□ 1.69
SKP2-208ENST00000546211 TNS3Q68CZ2 1445 aa25.6■■□□□ 1.69
SKP2-208ENST00000546211 NCBP3Q53F19 620 aaKnown RBP25.59■■□□□ 1.69
SKP2-208ENST00000546211 RSPH6AQ9H0K4 717 aa25.59■■□□□ 1.69
SKP2-208ENST00000546211 GCP02774 474 aa25.57■■□□□ 1.68
SKP2-208ENST00000546211 HMOX1P09601 288 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms