RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 HIRIP3Q9BW71 556 aaPredicted RBP17.1■□□□□ 0.33
TMEM258-208ENST00000545210 ITSN1Q15811 1721 aa17.1■□□□□ 0.33
TMEM258-208ENST00000545210 SPATA31A5Q5VU36 1347 aa17.09■□□□□ 0.33
TMEM258-208ENST00000545210 SPATA31A7Q8IWB4 1347 aa17.09■□□□□ 0.33
TMEM258-208ENST00000545210 GPRASP1Q5JY77 1395 aa17.09■□□□□ 0.33
TMEM258-208ENST00000545210 ADGRB1O14514 1584 aa17.09■□□□□ 0.33
TMEM258-208ENST00000545210 PHRF1Q9P1Y6 1649 aaKnown RBP17.08■□□□□ 0.32
TMEM258-208ENST00000545210 TULP4Q9NRJ4 1543 aa17.08■□□□□ 0.32
TMEM258-208ENST00000545210 DISP2A7MBM2 1401 aa17.07■□□□□ 0.32
TMEM258-208ENST00000545210 MINK1Q8N4C8 1332 aaPredicted RBP17.07■□□□□ 0.32
TMEM258-208ENST00000545210 PRR36Q9H6K5 1346 aa17.07■□□□□ 0.32
TMEM258-208ENST00000545210 ACIN1Q9UKV3 1341 aaKnown RBP17.07■□□□□ 0.32
TMEM258-208ENST00000545210 TRAK1Q9UPV9 953 aa17.06■□□□□ 0.32
TMEM258-208ENST00000545210 RREB1Q92766 1687 aa17.05■□□□□ 0.32
TMEM258-208ENST00000545210 PAK3O75914 559 aaPredicted RBP17.05■□□□□ 0.32
TMEM258-208ENST00000545210 EZH2Q15910 746 aaKnown RBP17.05■□□□□ 0.32
TMEM258-208ENST00000545210 PRDM11Q9NQV5 511 aa17.05■□□□□ 0.32
TMEM258-208ENST00000545210 EIF3AQ14152 1382 aaKnown RBP17.04■□□□□ 0.32
TMEM258-208ENST00000545210 NUP188Q5SRE5 1749 aa17.04■□□□□ 0.32
TMEM258-208ENST00000545210 ARHGEF28Q8N1W1 1705 aaKnown RBP17.04■□□□□ 0.32
TMEM258-208ENST00000545210 NGDNQ8NEJ9 315 aaKnown RBP17.03■□□□□ 0.32
TMEM258-208ENST00000545210 TRIM37O94972 964 aa17.02■□□□□ 0.32
TMEM258-208ENST00000545210 SPATA31A1Q5TZJ5 1347 aa17.01■□□□□ 0.31
TMEM258-208ENST00000545210 WASLO00401 505 aaPredicted RBP17.01■□□□□ 0.31
TMEM258-208ENST00000545210 CHRNA2Q15822 529 aa17.01■□□□□ 0.31
TMEM258-208ENST00000545210 CAMKK2Q96RR4 588 aa17.01■□□□□ 0.31
TMEM258-208ENST00000545210 KIAA0232Q92628 1395 aa17.01■□□□□ 0.31
TMEM258-208ENST00000545210 FAM196AQ6ZSG2 479 aa17■□□□□ 0.31
TMEM258-208ENST00000545210 STRN4Q9NRL3 753 aa17■□□□□ 0.31
TMEM258-208ENST00000545210 APBA3O96018 575 aa16.98■□□□□ 0.31
TMEM258-208ENST00000545210 USP35Q9P2H5 1018 aa16.98■□□□□ 0.31
TMEM258-208ENST00000545210 KDM2AQ9Y2K7 1162 aa16.98■□□□□ 0.31
TMEM258-208ENST00000545210 ATP7BP35670 1465 aa16.98■□□□□ 0.31
TMEM258-208ENST00000545210 TOPAZ1Q8N9V7 1692 aa16.97■□□□□ 0.31
TMEM258-208ENST00000545210 ZC3H6P61129 1189 aaKnown RBP16.97■□□□□ 0.31
TMEM258-208ENST00000545210 NUTM2GQ5VZR2 741 aa16.96■□□□□ 0.31
TMEM258-208ENST00000545210 PARD3Q8TEW0 1356 aa16.96■□□□□ 0.31
TMEM258-208ENST00000545210 NRKQ7Z2Y5 1582 aa16.95■□□□□ 0.3
TMEM258-208ENST00000545210 DCAF11Q8TEB1 546 aa16.95■□□□□ 0.3
TMEM258-208ENST00000545210 NUDT16Q96DE0 195 aaKnown RBP16.95■□□□□ 0.3
TMEM258-208ENST00000545210 LMO7Q8WWI1 1683 aa16.94■□□□□ 0.3
TMEM258-208ENST00000545210 SSH2Q76I76 1423 aa16.94■□□□□ 0.3
TMEM258-208ENST00000545210 CAMTA1Q9Y6Y1 1673 aa16.94■□□□□ 0.3
TMEM258-208ENST00000545210 PARP4Q9UKK3 1724 aaKnown RBP16.93■□□□□ 0.3
TMEM258-208ENST00000545210 EVA1CP58658 441 aa16.93■□□□□ 0.3
TMEM258-208ENST00000545210 PDE3BQ13370 1112 aa16.93■□□□□ 0.3
TMEM258-208ENST00000545210 SBF2Q86WG5 1849 aa16.93■□□□□ 0.3
TMEM258-208ENST00000545210 BARGINQ6ZT62 677 aa16.91■□□□□ 0.3
TMEM258-208ENST00000545210 RAB3GAP2Q9H2M9 1393 aa16.9■□□□□ 0.3
TMEM258-208ENST00000545210 YY1P25490 414 aa16.9■□□□□ 0.3
TMEM258-208ENST00000545210 NBPF8Q3BBV2 869 aa16.9■□□□□ 0.3
TMEM258-208ENST00000545210 NBPF14Q5TI25 921 aa16.9■□□□□ 0.3
TMEM258-208ENST00000545210 LARP1Q6PKG0 1096 aaKnown RBP16.9■□□□□ 0.3
TMEM258-208ENST00000545210 ACEP12821 1306 aa16.9■□□□□ 0.3
TMEM258-208ENST00000545210 POLR3AO14802 1390 aaPredicted RBP16.89■□□□□ 0.3
TMEM258-208ENST00000545210 CDK19Q9BWU1 502 aa16.89■□□□□ 0.29
TMEM258-208ENST00000545210 RGPD3A6NKT7 1758 aaPredicted RBP16.89■□□□□ 0.29
TMEM258-208ENST00000545210 RGPD4Q7Z3J3 1758 aa16.89■□□□□ 0.29
TMEM258-208ENST00000545210 PEAK1Q9H792 1746 aa16.88■□□□□ 0.29
TMEM258-208ENST00000545210 TCP11L2Q8N4U5 519 aa16.88■□□□□ 0.29
TMEM258-208ENST00000545210 ABTB2Q8N961 1025 aa16.87■□□□□ 0.29
TMEM258-208ENST00000545210 PPP1R1BQ9UD71 204 aaPredicted RBP16.86■□□□□ 0.29
TMEM258-208ENST00000545210 WNK3Q9BYP7 1800 aa16.86■□□□□ 0.29
TMEM258-208ENST00000545210 CPDO75976 1380 aa16.86■□□□□ 0.29
TMEM258-208ENST00000545210 LRRC37A3O60309 1634 aa16.85■□□□□ 0.29
TMEM258-208ENST00000545210 KIAA1210Q9ULL0 1709 aa16.85■□□□□ 0.29
TMEM258-208ENST00000545210 STAC3Q96MF2 364 aa16.85■□□□□ 0.29
TMEM258-208ENST00000545210 SPON1Q9HCB6 807 aa16.85■□□□□ 0.29
TMEM258-208ENST00000545210 CCDC61Q9Y6R9 512 aa16.85■□□□□ 0.29
TMEM258-208ENST00000545210 AKAP12Q02952 1782 aa16.84■□□□□ 0.29
TMEM258-208ENST00000545210 CASZ1Q86V15 1759 aa16.84■□□□□ 0.29
TMEM258-208ENST00000545210 USP19O94966 1318 aa16.84■□□□□ 0.29
TMEM258-208ENST00000545210 COL5A2P05997 1499 aaPredicted RBP16.84■□□□□ 0.29
TMEM258-208ENST00000545210 PLEKHG3A1L390 1219 aa16.83■□□□□ 0.28
TMEM258-208ENST00000545210 KCNQ2O43526 872 aa16.83■□□□□ 0.28
TMEM258-208ENST00000545210 THRAP3Q9Y2W1 955 aaKnown RBP16.83■□□□□ 0.28
TMEM258-208ENST00000545210 RGPD5Q99666 1765 aa16.82■□□□□ 0.28
TMEM258-208ENST00000545210 GCP02774 474 aa16.82■□□□□ 0.28
TMEM258-208ENST00000545210 OVOS2A0A0G2JMS6 1433 aa16.81■□□□□ 0.28
TMEM258-208ENST00000545210 OVOS2A0A0J9YW53 1432 aa16.81■□□□□ 0.28
TMEM258-208ENST00000545210 CRB1P82279 1406 aa16.81■□□□□ 0.28
TMEM258-208ENST00000545210 OVOS2Q6IE36 1432 aa16.81■□□□□ 0.28
TMEM258-208ENST00000545210 NINLQ9Y2I6 1382 aa16.81■□□□□ 0.28
TMEM258-208ENST00000545210 NLRP13Q86W25 1043 aa16.81■□□□□ 0.28
TMEM258-208ENST00000545210 DCAF8L1A6NGE4 600 aa16.8■□□□□ 0.28
TMEM258-208ENST00000545210 QRICH2Q9H0J4 1663 aa16.8■□□□□ 0.28
TMEM258-208ENST00000545210 PPIP5K1Q6PFW1 1433 aa16.79■□□□□ 0.28
TMEM258-208ENST00000545210 COL18A1P39060 1754 aa16.79■□□□□ 0.28
TMEM258-208ENST00000545210 ZBTB7CA1YPR0 619 aa16.79■□□□□ 0.28
TMEM258-208ENST00000545210 MYOM1P52179 1685 aa16.78■□□□□ 0.28
TMEM258-208ENST00000545210 C11orf95C9JLR9 678 aaPredicted RBP16.78■□□□□ 0.28
TMEM258-208ENST00000545210 SRPK2P78362 688 aaKnown RBP16.77■□□□□ 0.28
TMEM258-208ENST00000545210 PIK3C2AO00443 1686 aa16.77■□□□□ 0.28
TMEM258-208ENST00000545210 PLSCR1O15162 318 aa16.76■□□□□ 0.27
TMEM258-208ENST00000545210 PTF1AQ7RTS3 328 aa16.76■□□□□ 0.27
TMEM258-208ENST00000545210 ANO8Q9HCE9 1232 aaPredicted RBP16.76■□□□□ 0.27
TMEM258-208ENST00000545210 SLIT3O75094 1523 aa16.75■□□□□ 0.27
TMEM258-208ENST00000545210 DDB1Q16531 1140 aa16.75■□□□□ 0.27
TMEM258-208ENST00000545210 PDGFDQ9GZP0 370 aaPredicted RBP16.75■□□□□ 0.27
TMEM258-208ENST00000545210 AATKQ6ZMQ8 1374 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms