RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 NINLQ9Y2I6 1382 aa19.13■□□□□ 0.65
LTBR-213ENST00000544454 USP6P35125 1406 aa19.13■□□□□ 0.65
LTBR-213ENST00000544454 CPSF1Q10570 1443 aaKnown RBP19.13■□□□□ 0.65
LTBR-213ENST00000544454 HDGFL2Q7Z4V5 671 aaPredicted RBP19.12■□□□□ 0.65
LTBR-213ENST00000544454 ABTB2Q8N961 1025 aa19.12■□□□□ 0.65
LTBR-213ENST00000544454 CABLES1Q8TDN4 633 aa19.12■□□□□ 0.65
LTBR-213ENST00000544454 RGS17Q9UGC6 210 aaPredicted RBP19.12■□□□□ 0.65
LTBR-213ENST00000544454 TRPM3Q9HCF6 1732 aaPredicted RBP19.11■□□□□ 0.65
LTBR-213ENST00000544454 SSH2Q76I76 1423 aa19.11■□□□□ 0.65
LTBR-213ENST00000544454 HAP1P54257 671 aaPredicted RBP19.11■□□□□ 0.65
LTBR-213ENST00000544454 KTN1Q86UP2 1357 aaKnown RBP19.1■□□□□ 0.65
LTBR-213ENST00000544454 NGLY1Q96IV0 654 aa19.1■□□□□ 0.65
LTBR-213ENST00000544454 C8orf37Q96NL8 207 aa19.1■□□□□ 0.65
LTBR-213ENST00000544454 TTC21BQ7Z4L5 1316 aa19.09■□□□□ 0.65
LTBR-213ENST00000544454 PLEKHG5O94827 1062 aa19.08■□□□□ 0.64
LTBR-213ENST00000544454 ZNF772Q68DY9 489 aaPredicted RBP19.08■□□□□ 0.64
LTBR-213ENST00000544454 NLRP13Q86W25 1043 aa19.08■□□□□ 0.64
LTBR-213ENST00000544454 ALS2Q96Q42 1657 aa19.08■□□□□ 0.64
LTBR-213ENST00000544454 TTC21AQ8NDW8 1320 aa19.07■□□□□ 0.64
LTBR-213ENST00000544454 NUTM2GQ5VZR2 741 aa19.07■□□□□ 0.64
LTBR-213ENST00000544454 FNBP4Q8N3X1 1017 aaPredicted RBP19.07■□□□□ 0.64
LTBR-213ENST00000544454 CD163L1Q9NR16 1453 aa19.07■□□□□ 0.64
LTBR-213ENST00000544454 AFF2P51816 1311 aa19.06■□□□□ 0.64
LTBR-213ENST00000544454 NLRP6P59044 892 aa19.05■□□□□ 0.64
LTBR-213ENST00000544454 A0A1W2PP64 1363 aa19.05■□□□□ 0.64
LTBR-213ENST00000544454 USP19O94966 1318 aa19.03■□□□□ 0.64
LTBR-213ENST00000544454 POTEAQ6S8J7 498 aa19.03■□□□□ 0.64
LTBR-213ENST00000544454 ANKRD36BQ8N2N9 1353 aa19.03■□□□□ 0.64
LTBR-213ENST00000544454 EDC4Q6P2E9 1401 aaKnown RBP19.02■□□□□ 0.64
LTBR-213ENST00000544454 FAM83GA6ND36 823 aa19.02■□□□□ 0.64
LTBR-213ENST00000544454 GCP02774 474 aa19.02■□□□□ 0.64
LTBR-213ENST00000544454 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.02■□□□□ 0.64
LTBR-213ENST00000544454 USP21Q9UK80 565 aa19.02■□□□□ 0.64
LTBR-213ENST00000544454 C11orf95C9JLR9 678 aaPredicted RBP19.01■□□□□ 0.63
LTBR-213ENST00000544454 POLR3GLQ9BT43 218 aa19■□□□□ 0.63
LTBR-213ENST00000544454 AKAP12Q02952 1782 aa19■□□□□ 0.63
LTBR-213ENST00000544454 QTRT2Q9H974 415 aaKnown RBP18.99■□□□□ 0.63
LTBR-213ENST00000544454 USP31Q70CQ4 1352 aa18.98■□□□□ 0.63
LTBR-213ENST00000544454 ZC3H6P61129 1189 aaKnown RBP18.98■□□□□ 0.63
LTBR-213ENST00000544454 ILDR2Q71H61 639 aa18.98■□□□□ 0.63
LTBR-213ENST00000544454 NME9Q86XW9 330 aa18.98■□□□□ 0.63
LTBR-213ENST00000544454 KCNH5Q8NCM2 988 aa18.98■□□□□ 0.63
LTBR-213ENST00000544454 PRDM11Q9NQV5 511 aa18.98■□□□□ 0.63
LTBR-213ENST00000544454 UNC5CLQ8IV45 518 aa18.97■□□□□ 0.63
LTBR-213ENST00000544454 TRPC5Q9UL62 973 aaPredicted RBP18.97■□□□□ 0.63
LTBR-213ENST00000544454 MON2Q7Z3U7 1717 aa18.97■□□□□ 0.63
LTBR-213ENST00000544454 BCL9LQ86UU0 1499 aa18.97■□□□□ 0.63
LTBR-213ENST00000544454 CPDO75976 1380 aa18.96■□□□□ 0.63
LTBR-213ENST00000544454 KIAA0232Q92628 1395 aa18.96■□□□□ 0.63
LTBR-213ENST00000544454 SLIT2O94813 1529 aa18.96■□□□□ 0.63
LTBR-213ENST00000544454 ZEB1P37275 1124 aaPredicted RBP18.96■□□□□ 0.63
LTBR-213ENST00000544454 NRKQ7Z2Y5 1582 aa18.95■□□□□ 0.62
LTBR-213ENST00000544454 RXRBP28702 533 aa18.95■□□□□ 0.62
LTBR-213ENST00000544454 CARD14Q9BXL6 1004 aa18.95■□□□□ 0.62
LTBR-213ENST00000544454 ZRANB1Q9UGI0 708 aa18.95■□□□□ 0.62
LTBR-213ENST00000544454 ABCA3Q99758 1704 aa18.94■□□□□ 0.62
LTBR-213ENST00000544454 BTG4Q9NY30 223 aa18.94■□□□□ 0.62
LTBR-213ENST00000544454 PIK3C2AO00443 1686 aa18.94■□□□□ 0.62
LTBR-213ENST00000544454 RBM6P78332 1123 aaKnown RBP18.93■□□□□ 0.62
LTBR-213ENST00000544454 CHRNA2Q15822 529 aa18.93■□□□□ 0.62
LTBR-213ENST00000544454 MARF1Q9Y4F3 1742 aaKnown RBP18.93■□□□□ 0.62
LTBR-213ENST00000544454 CRYBG1Q9Y4K1 1723 aa18.93■□□□□ 0.62
LTBR-213ENST00000544454 KIF7Q2M1P5 1343 aa18.93■□□□□ 0.62
LTBR-213ENST00000544454 SLIT3O75094 1523 aa18.92■□□□□ 0.62
LTBR-213ENST00000544454 FYB1O15117 783 aa18.92■□□□□ 0.62
LTBR-213ENST00000544454 ATRNO75882 1429 aa18.91■□□□□ 0.62
LTBR-213ENST00000544454 VPS72Q15906 364 aa18.91■□□□□ 0.62
LTBR-213ENST00000544454 ARHGEF25Q86VW2 580 aa18.91■□□□□ 0.62
LTBR-213ENST00000544454 COG3Q96JB2 828 aa18.91■□□□□ 0.62
LTBR-213ENST00000544454 PANK3Q9H999 370 aa18.91■□□□□ 0.62
LTBR-213ENST00000544454 PHRF1Q9P1Y6 1649 aaKnown RBP18.91■□□□□ 0.62
LTBR-213ENST00000544454 GJD4Q96KN9 370 aaPredicted RBP18.9■□□□□ 0.62
LTBR-213ENST00000544454 SOX12O15370 315 aa18.89■□□□□ 0.61
LTBR-213ENST00000544454 AATKQ6ZMQ8 1374 aa18.89■□□□□ 0.61
LTBR-213ENST00000544454 OVOS2A0A0J9YW53 1432 aa18.89■□□□□ 0.61
LTBR-213ENST00000544454 OVOS2Q6IE36 1432 aa18.89■□□□□ 0.61
LTBR-213ENST00000544454 COL14A1Q05707 1796 aaKnown RBP18.88■□□□□ 0.61
LTBR-213ENST00000544454 NSD3Q9BZ95 1437 aa18.88■□□□□ 0.61
LTBR-213ENST00000544454 MYOM1P52179 1685 aa18.88■□□□□ 0.61
LTBR-213ENST00000544454 EVA1CP58658 441 aa18.87■□□□□ 0.61
LTBR-213ENST00000544454 CGNL1Q0VF96 1302 aa18.87■□□□□ 0.61
LTBR-213ENST00000544454 WASHC2AQ641Q2 1341 aa18.87■□□□□ 0.61
LTBR-213ENST00000544454 CCDC7Q96M83 1385 aa18.87■□□□□ 0.61
LTBR-213ENST00000544454 GGNBP2Q9H3C7 697 aa18.87■□□□□ 0.61
LTBR-213ENST00000544454 ZBTB7CA1YPR0 619 aa18.86■□□□□ 0.61
LTBR-213ENST00000544454 NWD2Q9ULI1 1742 aa18.86■□□□□ 0.61
LTBR-213ENST00000544454 CCDC9Q9Y3X0 531 aaKnown RBP18.85■□□□□ 0.61
LTBR-213ENST00000544454 NFAT5O94916 1531 aa18.84■□□□□ 0.61
LTBR-213ENST00000544454 CDK12Q9NYV4 1490 aaPredicted RBP18.84■□□□□ 0.61
LTBR-213ENST00000544454 STRN4Q9NRL3 753 aa18.84■□□□□ 0.61
LTBR-213ENST00000544454 USP54Q70EL1 1684 aa18.84■□□□□ 0.61
LTBR-213ENST00000544454 CAMTA1Q9Y6Y1 1673 aa18.83■□□□□ 0.61
LTBR-213ENST00000544454 AXIN2Q9Y2T1 843 aa18.83■□□□□ 0.6
LTBR-213ENST00000544454 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.83■□□□□ 0.6
LTBR-213ENST00000544454 PLCH1Q4KWH8 1693 aa18.82■□□□□ 0.6
LTBR-213ENST00000544454 SPATA31A5Q5VU36 1347 aa18.82■□□□□ 0.6
LTBR-213ENST00000544454 SPATA31A7Q8IWB4 1347 aa18.82■□□□□ 0.6
LTBR-213ENST00000544454 ONECUT3O60422 494 aaPredicted RBP18.82■□□□□ 0.6
LTBR-213ENST00000544454 KNSTRNQ9Y448 316 aa18.82■□□□□ 0.6
LTBR-213ENST00000544454 LARP1Q6PKG0 1096 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms