RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 PAK3O75914 559 aaPredicted RBP19.81■□□□□ 0.76
VAMP1-208ENST00000544432 CARD11Q9BXL7 1154 aa19.81■□□□□ 0.76
VAMP1-208ENST00000544432 BRD4O60885 1362 aaPredicted RBP19.81■□□□□ 0.76
VAMP1-208ENST00000544432 PPIP5K1Q6PFW1 1433 aa19.8■□□□□ 0.76
VAMP1-208ENST00000544432 SBNO2Q9Y2G9 1366 aa19.8■□□□□ 0.76
VAMP1-208ENST00000544432 CLSPNQ9HAW4 1339 aa19.79■□□□□ 0.76
VAMP1-208ENST00000544432 FAM83GA6ND36 823 aa19.78■□□□□ 0.76
VAMP1-208ENST00000544432 GJD4Q96KN9 370 aaPredicted RBP19.78■□□□□ 0.76
VAMP1-208ENST00000544432 CABP1Q9NZU7 370 aa19.78■□□□□ 0.76
VAMP1-208ENST00000544432 RGS12O14924 1447 aa19.77■□□□□ 0.76
VAMP1-208ENST00000544432 ABCA3Q99758 1704 aa19.76■□□□□ 0.75
VAMP1-208ENST00000544432 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.76■□□□□ 0.75
VAMP1-208ENST00000544432 PLEKHG5O94827 1062 aa19.76■□□□□ 0.75
VAMP1-208ENST00000544432 TIMELESSQ9UNS1 1208 aa19.76■□□□□ 0.75
VAMP1-208ENST00000544432 VPS72Q15906 364 aa19.74■□□□□ 0.75
VAMP1-208ENST00000544432 ATAD2Q6PL18 1390 aa19.73■□□□□ 0.75
VAMP1-208ENST00000544432 ABTB2Q8N961 1025 aa19.73■□□□□ 0.75
VAMP1-208ENST00000544432 UPF1Q92900 1129 aaKnown RBP eCLIP19.73■□□□□ 0.75
VAMP1-208ENST00000544432 ZNF692Q9BU19 519 aaPredicted RBP19.73■□□□□ 0.75
VAMP1-208ENST00000544432 PCGF6Q9BYE7 350 aa19.73■□□□□ 0.75
VAMP1-208ENST00000544432 NWD2Q9ULI1 1742 aa19.72■□□□□ 0.75
VAMP1-208ENST00000544432 USP6P35125 1406 aa19.71■□□□□ 0.75
VAMP1-208ENST00000544432 PUS7Q96PZ0 661 aaKnown RBP19.71■□□□□ 0.75
VAMP1-208ENST00000544432 CRYBG1Q9Y4K1 1723 aa19.71■□□□□ 0.75
VAMP1-208ENST00000544432 SLC24A1O60721 1099 aa19.7■□□□□ 0.74
VAMP1-208ENST00000544432 NLRP13Q86W25 1043 aa19.7■□□□□ 0.74
VAMP1-208ENST00000544432 USP19O94966 1318 aa19.7■□□□□ 0.74
VAMP1-208ENST00000544432 SSH2Q76I76 1423 aa19.69■□□□□ 0.74
VAMP1-208ENST00000544432 ONECUT3O60422 494 aaPredicted RBP19.69■□□□□ 0.74
VAMP1-208ENST00000544432 NUTM2GQ5VZR2 741 aa19.69■□□□□ 0.74
VAMP1-208ENST00000544432 PRDM11Q9NQV5 511 aa19.69■□□□□ 0.74
VAMP1-208ENST00000544432 BTG4Q9NY30 223 aa19.69■□□□□ 0.74
VAMP1-208ENST00000544432 COL14A1Q05707 1796 aaKnown RBP19.69■□□□□ 0.74
VAMP1-208ENST00000544432 PLCH1Q4KWH8 1693 aa19.68■□□□□ 0.74
VAMP1-208ENST00000544432 KIAA0232Q92628 1395 aa19.67■□□□□ 0.74
VAMP1-208ENST00000544432 GLI3P10071 1580 aa19.66■□□□□ 0.74
VAMP1-208ENST00000544432 CPDO75976 1380 aa19.66■□□□□ 0.74
VAMP1-208ENST00000544432 CPSF1Q10570 1443 aaKnown RBP19.66■□□□□ 0.74
VAMP1-208ENST00000544432 ST20-MTHFSA0A0A6YYL1 179 aa19.65■□□□□ 0.74
VAMP1-208ENST00000544432 GCP02774 474 aa19.65■□□□□ 0.74
VAMP1-208ENST00000544432 TESK2Q96S53 571 aa19.65■□□□□ 0.74
VAMP1-208ENST00000544432 ZC3H6P61129 1189 aaKnown RBP19.64■□□□□ 0.73
VAMP1-208ENST00000544432 CCDC9Q9Y3X0 531 aaKnown RBP19.64■□□□□ 0.73
VAMP1-208ENST00000544432 TTC21BQ7Z4L5 1316 aa19.64■□□□□ 0.73
VAMP1-208ENST00000544432 PHRF1Q9P1Y6 1649 aaKnown RBP19.64■□□□□ 0.73
VAMP1-208ENST00000544432 NRAPQ86VF7 1730 aa19.63■□□□□ 0.73
VAMP1-208ENST00000544432 TTC21AQ8NDW8 1320 aa19.63■□□□□ 0.73
VAMP1-208ENST00000544432 NLRP6P59044 892 aa19.63■□□□□ 0.73
VAMP1-208ENST00000544432 SEPT12Q8IYM1 358 aa19.62■□□□□ 0.73
VAMP1-208ENST00000544432 SPATA31A5Q5VU36 1347 aa19.61■□□□□ 0.73
VAMP1-208ENST00000544432 SPATA31A7Q8IWB4 1347 aa19.61■□□□□ 0.73
VAMP1-208ENST00000544432 CHRNA2Q15822 529 aa19.61■□□□□ 0.73
VAMP1-208ENST00000544432 KTN1Q86UP2 1357 aaKnown RBP19.6■□□□□ 0.73
VAMP1-208ENST00000544432 NRKQ7Z2Y5 1582 aa19.6■□□□□ 0.73
VAMP1-208ENST00000544432 AKAP12Q02952 1782 aa19.6■□□□□ 0.73
VAMP1-208ENST00000544432 SLC12A5Q9H2X9 1139 aa19.59■□□□□ 0.73
VAMP1-208ENST00000544432 USP47Q96K76 1375 aa19.58■□□□□ 0.73
VAMP1-208ENST00000544432 SLIT3O75094 1523 aa19.58■□□□□ 0.73
VAMP1-208ENST00000544432 CCDC125Q86Z20 511 aa19.58■□□□□ 0.72
VAMP1-208ENST00000544432 TMC1Q8TDI8 760 aa19.58■□□□□ 0.72
VAMP1-208ENST00000544432 CD163L1Q9NR16 1453 aa19.58■□□□□ 0.72
VAMP1-208ENST00000544432 NINLQ9Y2I6 1382 aa19.57■□□□□ 0.72
VAMP1-208ENST00000544432 EP400Q96L91 3159 aa19.57■□□□□ 0.72
VAMP1-208ENST00000544432 HDGFL2Q7Z4V5 671 aaPredicted RBP19.57■□□□□ 0.72
VAMP1-208ENST00000544432 KCNH5Q8NCM2 988 aa19.57■□□□□ 0.72
VAMP1-208ENST00000544432 CCER1Q8TC90 406 aaPredicted RBP19.57■□□□□ 0.72
VAMP1-208ENST00000544432 TERF2IPQ9NYB0 399 aa19.57■□□□□ 0.72
VAMP1-208ENST00000544432 SPATA31A1Q5TZJ5 1347 aa19.56■□□□□ 0.72
VAMP1-208ENST00000544432 EVA1CP58658 441 aa19.56■□□□□ 0.72
VAMP1-208ENST00000544432 FAM98CQ17RN3 349 aaKnown RBP19.56■□□□□ 0.72
VAMP1-208ENST00000544432 AATKQ6ZMQ8 1374 aa19.56■□□□□ 0.72
VAMP1-208ENST00000544432 PIK3C2AO00443 1686 aa19.56■□□□□ 0.72
VAMP1-208ENST00000544432 CAMTA1Q9Y6Y1 1673 aa19.55■□□□□ 0.72
VAMP1-208ENST00000544432 USP31Q70CQ4 1352 aa19.55■□□□□ 0.72
VAMP1-208ENST00000544432 TMF1P82094 1093 aa19.54■□□□□ 0.72
VAMP1-208ENST00000544432 KRT27Q7Z3Y8 459 aa19.54■□□□□ 0.72
VAMP1-208ENST00000544432 STRN4Q9NRL3 753 aa19.54■□□□□ 0.72
VAMP1-208ENST00000544432 LMO7Q8WWI1 1683 aa19.53■□□□□ 0.72
VAMP1-208ENST00000544432 MON2Q7Z3U7 1717 aa19.53■□□□□ 0.72
VAMP1-208ENST00000544432 EDC4Q6P2E9 1401 aaKnown RBP19.52■□□□□ 0.72
VAMP1-208ENST00000544432 CDCA8Q53HL2 280 aa19.52■□□□□ 0.72
VAMP1-208ENST00000544432 BARGINQ6ZT62 677 aa19.52■□□□□ 0.72
VAMP1-208ENST00000544432 ARHGEF25Q86VW2 580 aa19.52■□□□□ 0.72
VAMP1-208ENST00000544432 LARP1Q6PKG0 1096 aaKnown RBP19.51■□□□□ 0.71
VAMP1-208ENST00000544432 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.51■□□□□ 0.71
VAMP1-208ENST00000544432 A0A1W2PP64 1363 aa19.51■□□□□ 0.71
VAMP1-208ENST00000544432 BRWD3Q6RI45 1802 aa19.51■□□□□ 0.71
VAMP1-208ENST00000544432 THRAP3Q9Y2W1 955 aaKnown RBP19.5■□□□□ 0.71
VAMP1-208ENST00000544432 COL5A2P05997 1499 aaPredicted RBP19.49■□□□□ 0.71
VAMP1-208ENST00000544432 A0A0G2JS52 829 aa19.49■□□□□ 0.71
VAMP1-208ENST00000544432 MYT1Q01538 1121 aa19.49■□□□□ 0.71
VAMP1-208ENST00000544432 TCP11L2Q8N4U5 519 aa19.49■□□□□ 0.71
VAMP1-208ENST00000544432 NME9Q86XW9 330 aa19.48■□□□□ 0.71
VAMP1-208ENST00000544432 THSD7AQ9UPZ6 1657 aa19.48■□□□□ 0.71
VAMP1-208ENST00000544432 BLMP54132 1417 aaPredicted RBP19.48■□□□□ 0.71
VAMP1-208ENST00000544432 ZRANB1Q9UGI0 708 aa19.47■□□□□ 0.71
VAMP1-208ENST00000544432 USP54Q70EL1 1684 aa19.46■□□□□ 0.71
VAMP1-208ENST00000544432 NFAT5O94916 1531 aa19.46■□□□□ 0.71
VAMP1-208ENST00000544432 ZBTB7CA1YPR0 619 aa19.46■□□□□ 0.71
VAMP1-208ENST00000544432 AXIN2Q9Y2T1 843 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms