RNA–Protein interactions for RNA: ENST00000543405.1

CACNA2D4-216, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 5

Gene CACNA2D4, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-216ENST00000543405 SPATA31A5Q5VU36 1347 aa18.51■□□□□ 0.55
CACNA2D4-216ENST00000543405 SPATA31A7Q8IWB4 1347 aa18.51■□□□□ 0.55
CACNA2D4-216ENST00000543405 EZH2Q15910 746 aaKnown RBP18.5■□□□□ 0.55
CACNA2D4-216ENST00000543405 PMFBP1Q8TBY8 1022 aa18.5■□□□□ 0.55
CACNA2D4-216ENST00000543405 TULP4Q9NRJ4 1543 aa18.49■□□□□ 0.55
CACNA2D4-216ENST00000543405 SAFB2Q14151 953 aaKnown RBP eCLIP18.49■□□□□ 0.55
CACNA2D4-216ENST00000543405 RREB1Q92766 1687 aa18.48■□□□□ 0.55
CACNA2D4-216ENST00000543405 PRR36Q9H6K5 1346 aa18.48■□□□□ 0.55
CACNA2D4-216ENST00000543405 ACIN1Q9UKV3 1341 aaKnown RBP18.48■□□□□ 0.55
CACNA2D4-216ENST00000543405 CAMKK2Q96RR4 588 aa18.47■□□□□ 0.55
CACNA2D4-216ENST00000543405 NUP188Q5SRE5 1749 aa18.46■□□□□ 0.55
CACNA2D4-216ENST00000543405 EIF3AQ14152 1382 aaKnown RBP18.45■□□□□ 0.54
CACNA2D4-216ENST00000543405 GPRASP1Q5JY77 1395 aa18.45■□□□□ 0.54
CACNA2D4-216ENST00000543405 PHRF1Q9P1Y6 1649 aaKnown RBP18.45■□□□□ 0.54
CACNA2D4-216ENST00000543405 PARD3Q8TEW0 1356 aa18.44■□□□□ 0.54
CACNA2D4-216ENST00000543405 YY1P25490 414 aa18.44■□□□□ 0.54
CACNA2D4-216ENST00000543405 POGKQ9P215 609 aa18.44■□□□□ 0.54
CACNA2D4-216ENST00000543405 TRIM37O94972 964 aa18.43■□□□□ 0.54
CACNA2D4-216ENST00000543405 SPATA31A1Q5TZJ5 1347 aa18.42■□□□□ 0.54
CACNA2D4-216ENST00000543405 ITSN1Q15811 1721 aa18.41■□□□□ 0.54
CACNA2D4-216ENST00000543405 HIRIP3Q9BW71 556 aaPredicted RBP18.41■□□□□ 0.54
CACNA2D4-216ENST00000543405 PRDM11Q9NQV5 511 aa18.41■□□□□ 0.54
CACNA2D4-216ENST00000543405 ATP7BP35670 1465 aa18.4■□□□□ 0.54
CACNA2D4-216ENST00000543405 FAM196AQ6ZSG2 479 aa18.4■□□□□ 0.54
CACNA2D4-216ENST00000543405 KIAA0232Q92628 1395 aa18.4■□□□□ 0.54
CACNA2D4-216ENST00000543405 WASLO00401 505 aaPredicted RBP18.39■□□□□ 0.53
CACNA2D4-216ENST00000543405 MINK1Q8N4C8 1332 aaPredicted RBP18.39■□□□□ 0.53
CACNA2D4-216ENST00000543405 ARHGEF28Q8N1W1 1705 aaKnown RBP18.38■□□□□ 0.53
CACNA2D4-216ENST00000543405 APBA3O96018 575 aa18.38■□□□□ 0.53
CACNA2D4-216ENST00000543405 TRAK1Q9UPV9 953 aa18.38■□□□□ 0.53
CACNA2D4-216ENST00000543405 TOPAZ1Q8N9V7 1692 aa18.37■□□□□ 0.53
CACNA2D4-216ENST00000543405 CHRNA2Q15822 529 aa18.36■□□□□ 0.53
CACNA2D4-216ENST00000543405 NRKQ7Z2Y5 1582 aa18.35■□□□□ 0.53
CACNA2D4-216ENST00000543405 NGDNQ8NEJ9 315 aaKnown RBP18.35■□□□□ 0.53
CACNA2D4-216ENST00000543405 STRN4Q9NRL3 753 aa18.35■□□□□ 0.53
CACNA2D4-216ENST00000543405 LMO7Q8WWI1 1683 aa18.34■□□□□ 0.53
CACNA2D4-216ENST00000543405 SSH2Q76I76 1423 aa18.34■□□□□ 0.53
CACNA2D4-216ENST00000543405 PAK3O75914 559 aaPredicted RBP18.34■□□□□ 0.53
CACNA2D4-216ENST00000543405 NINLQ9Y2I6 1382 aa18.33■□□□□ 0.53
CACNA2D4-216ENST00000543405 CAMTA1Q9Y6Y1 1673 aa18.33■□□□□ 0.52
CACNA2D4-216ENST00000543405 PIAS4Q8N2W9 510 aaPredicted RBP18.32■□□□□ 0.52
CACNA2D4-216ENST00000543405 USP35Q9P2H5 1018 aa18.32■□□□□ 0.52
CACNA2D4-216ENST00000543405 POLR3AO14802 1390 aaPredicted RBP18.31■□□□□ 0.52
CACNA2D4-216ENST00000543405 BARGINQ6ZT62 677 aa18.31■□□□□ 0.52
CACNA2D4-216ENST00000543405 PARP4Q9UKK3 1724 aaKnown RBP18.3■□□□□ 0.52
CACNA2D4-216ENST00000543405 SPON1Q9HCB6 807 aa18.3■□□□□ 0.52
CACNA2D4-216ENST00000543405 ZC3H6P61129 1189 aaKnown RBP18.29■□□□□ 0.52
CACNA2D4-216ENST00000543405 NBPF8Q3BBV2 869 aa18.29■□□□□ 0.52
CACNA2D4-216ENST00000543405 NBPF14Q5TI25 921 aa18.29■□□□□ 0.52
CACNA2D4-216ENST00000543405 NUDT16Q96DE0 195 aaKnown RBP18.29■□□□□ 0.52
CACNA2D4-216ENST00000543405 PPP1R1BQ9UD71 204 aaPredicted RBP18.29■□□□□ 0.52
CACNA2D4-216ENST00000543405 RGPD3A6NKT7 1758 aaPredicted RBP18.28■□□□□ 0.52
CACNA2D4-216ENST00000543405 RGPD4Q7Z3J3 1758 aa18.28■□□□□ 0.52
CACNA2D4-216ENST00000543405 KCNQ2O43526 872 aa18.28■□□□□ 0.52
CACNA2D4-216ENST00000543405 PDE3BQ13370 1112 aa18.28■□□□□ 0.52
CACNA2D4-216ENST00000543405 UTRNP46939 3433 aa18.28■□□□□ 0.52
CACNA2D4-216ENST00000543405 CPDO75976 1380 aa18.28■□□□□ 0.52
CACNA2D4-216ENST00000543405 CASZ1Q86V15 1759 aa18.27■□□□□ 0.52
CACNA2D4-216ENST00000543405 PEAK1Q9H792 1746 aa18.27■□□□□ 0.52
CACNA2D4-216ENST00000543405 USP19O94966 1318 aa18.26■□□□□ 0.51
CACNA2D4-216ENST00000543405 NUTM2GQ5VZR2 741 aa18.26■□□□□ 0.51
CACNA2D4-216ENST00000543405 LARP1Q6PKG0 1096 aaKnown RBP18.26■□□□□ 0.51
CACNA2D4-216ENST00000543405 RAB3GAP2Q9H2M9 1393 aa18.26■□□□□ 0.51
CACNA2D4-216ENST00000543405 TCP11L2Q8N4U5 519 aa18.25■□□□□ 0.51
CACNA2D4-216ENST00000543405 DCAF11Q8TEB1 546 aa18.25■□□□□ 0.51
CACNA2D4-216ENST00000543405 STAC3Q96MF2 364 aa18.25■□□□□ 0.51
CACNA2D4-216ENST00000543405 ANO8Q9HCE9 1232 aaPredicted RBP18.24■□□□□ 0.51
CACNA2D4-216ENST00000543405 KDM2AQ9Y2K7 1162 aa18.24■□□□□ 0.51
CACNA2D4-216ENST00000543405 ACEP12821 1306 aa18.23■□□□□ 0.51
CACNA2D4-216ENST00000543405 LRRC37A3O60309 1634 aa18.23■□□□□ 0.51
CACNA2D4-216ENST00000543405 COL5A2P05997 1499 aaPredicted RBP18.23■□□□□ 0.51
CACNA2D4-216ENST00000543405 MYOM1P52179 1685 aa18.22■□□□□ 0.51
CACNA2D4-216ENST00000543405 SBF2Q86WG5 1849 aa18.22■□□□□ 0.51
CACNA2D4-216ENST00000543405 PLEKHG3A1L390 1219 aa18.22■□□□□ 0.51
CACNA2D4-216ENST00000543405 EVA1CP58658 441 aa18.22■□□□□ 0.51
CACNA2D4-216ENST00000543405 CDK19Q9BWU1 502 aa18.22■□□□□ 0.51
CACNA2D4-216ENST00000543405 OVOS2A0A0G2JMS6 1433 aa18.22■□□□□ 0.51
CACNA2D4-216ENST00000543405 OVOS2A0A0J9YW53 1432 aa18.22■□□□□ 0.51
CACNA2D4-216ENST00000543405 OVOS2Q6IE36 1432 aa18.22■□□□□ 0.51
CACNA2D4-216ENST00000543405 KIAA1210Q9ULL0 1709 aa18.21■□□□□ 0.51
CACNA2D4-216ENST00000543405 DCAF8L1A6NGE4 600 aa18.21■□□□□ 0.51
CACNA2D4-216ENST00000543405 THRAP3Q9Y2W1 955 aaKnown RBP18.21■□□□□ 0.51
CACNA2D4-216ENST00000543405 CCDC61Q9Y6R9 512 aa18.2■□□□□ 0.5
CACNA2D4-216ENST00000543405 WNK3Q9BYP7 1800 aa18.19■□□□□ 0.5
CACNA2D4-216ENST00000543405 CRB1P82279 1406 aa18.18■□□□□ 0.5
CACNA2D4-216ENST00000543405 PDGFDQ9GZP0 370 aaPredicted RBP18.18■□□□□ 0.5
CACNA2D4-216ENST00000543405 ABTB2Q8N961 1025 aa18.17■□□□□ 0.5
CACNA2D4-216ENST00000543405 ZNF784Q8NCA9 323 aaPredicted RBP18.17■□□□□ 0.5
CACNA2D4-216ENST00000543405 SLIT3O75094 1523 aa18.17■□□□□ 0.5
CACNA2D4-216ENST00000543405 C11orf95C9JLR9 678 aaPredicted RBP18.16■□□□□ 0.5
CACNA2D4-216ENST00000543405 COL18A1P39060 1754 aa18.15■□□□□ 0.5
CACNA2D4-216ENST00000543405 PLSCR1O15162 318 aa18.15■□□□□ 0.5
CACNA2D4-216ENST00000543405 GCP02774 474 aa18.15■□□□□ 0.5
CACNA2D4-216ENST00000543405 PTF1AQ7RTS3 328 aa18.15■□□□□ 0.5
CACNA2D4-216ENST00000543405 PPIP5K1Q6PFW1 1433 aa18.15■□□□□ 0.5
CACNA2D4-216ENST00000543405 PTGER2P43116 358 aa18.14■□□□□ 0.49
CACNA2D4-216ENST00000543405 BRD4O60885 1362 aaPredicted RBP18.14■□□□□ 0.49
CACNA2D4-216ENST00000543405 ZBTB7AO95365 584 aa18.13■□□□□ 0.49
CACNA2D4-216ENST00000543405 NLRP13Q86W25 1043 aa18.13■□□□□ 0.49
CACNA2D4-216ENST00000543405 AATKQ6ZMQ8 1374 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms