RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 NUDT16Q96DE0 195 aaKnown RBP28.54■■■□□ 2.16
CACNA1C-230ENST00000543114 CCDC9Q9Y3X0 531 aaKnown RBP28.54■■■□□ 2.16
CACNA1C-230ENST00000543114 PAK3O75914 559 aaPredicted RBP28.52■■■□□ 2.16
CACNA1C-230ENST00000543114 CCDC125Q86Z20 511 aa28.52■■■□□ 2.16
CACNA1C-230ENST00000543114 NBPF1Q3BBV0 1214 aa28.51■■■□□ 2.15
CACNA1C-230ENST00000543114 CDK19Q9BWU1 502 aa28.51■■■□□ 2.15
CACNA1C-230ENST00000543114 BLMP54132 1417 aaPredicted RBP28.51■■■□□ 2.15
CACNA1C-230ENST00000543114 BTG4Q9NY30 223 aa28.5■■■□□ 2.15
CACNA1C-230ENST00000543114 ONECUT3O60422 494 aaPredicted RBP28.49■■■□□ 2.15
CACNA1C-230ENST00000543114 POLR3AO14802 1390 aaPredicted RBP28.49■■■□□ 2.15
CACNA1C-230ENST00000543114 QRICH2Q9H0J4 1663 aa28.48■■■□□ 2.15
CACNA1C-230ENST00000543114 ACEP12821 1306 aa28.43■■■□□ 2.14
CACNA1C-230ENST00000543114 THSD7AQ9UPZ6 1657 aa28.43■■■□□ 2.14
CACNA1C-230ENST00000543114 NRKQ7Z2Y5 1582 aa28.43■■■□□ 2.14
CACNA1C-230ENST00000543114 FAM98CQ17RN3 349 aaKnown RBP28.43■■■□□ 2.14
CACNA1C-230ENST00000543114 KRT27Q7Z3Y8 459 aa28.43■■■□□ 2.14
CACNA1C-230ENST00000543114 PRDM11Q9NQV5 511 aa28.43■■■□□ 2.14
CACNA1C-230ENST00000543114 CCDC61Q9Y6R9 512 aa28.43■■■□□ 2.14
CACNA1C-230ENST00000543114 KIAA0232Q92628 1395 aa28.42■■■□□ 2.14
CACNA1C-230ENST00000543114 A0A0G2JS52 829 aa28.42■■■□□ 2.14
CACNA1C-230ENST00000543114 MYT1Q01538 1121 aa28.42■■■□□ 2.14
CACNA1C-230ENST00000543114 ZRANB1Q9UGI0 708 aa28.42■■■□□ 2.14
CACNA1C-230ENST00000543114 CENPJQ9HC77 1338 aaPredicted RBP28.41■■■□□ 2.14
CACNA1C-230ENST00000543114 TRPM1Q7Z4N2 1603 aa28.4■■■□□ 2.14
CACNA1C-230ENST00000543114 SPATA31A5Q5VU36 1347 aa28.4■■■□□ 2.14
CACNA1C-230ENST00000543114 SPATA31A7Q8IWB4 1347 aa28.4■■■□□ 2.14
CACNA1C-230ENST00000543114 PLEKHG3A1L390 1219 aa28.39■■■□□ 2.14
CACNA1C-230ENST00000543114 NBPF8Q3BBV2 869 aa28.39■■■□□ 2.14
CACNA1C-230ENST00000543114 DEFB132Q7Z7B7 95 aa28.39■■■□□ 2.14
CACNA1C-230ENST00000543114 PPIP5K1Q6PFW1 1433 aa28.38■■■□□ 2.13
CACNA1C-230ENST00000543114 NUTM2GQ5VZR2 741 aa28.38■■■□□ 2.13
CACNA1C-230ENST00000543114 L3MBTL2Q969R5 705 aa28.37■■■□□ 2.13
CACNA1C-230ENST00000543114 CHRNA2Q15822 529 aa28.36■■■□□ 2.13
CACNA1C-230ENST00000543114 SRPK2P78362 688 aaKnown RBP28.35■■■□□ 2.13
CACNA1C-230ENST00000543114 LMO7Q8WWI1 1683 aa28.33■■■□□ 2.13
CACNA1C-230ENST00000543114 ZC3H6P61129 1189 aaKnown RBP28.33■■■□□ 2.13
CACNA1C-230ENST00000543114 SF3B2Q13435 895 aaKnown RBP28.33■■■□□ 2.13
CACNA1C-230ENST00000543114 CABP2Q9NPB3 220 aa28.33■■■□□ 2.13
CACNA1C-230ENST00000543114 RGPD1P0DJD0 1748 aa28.32■■■□□ 2.12
CACNA1C-230ENST00000543114 SIN3AQ96ST3 1273 aa28.32■■■□□ 2.12
CACNA1C-230ENST00000543114 USP19O94966 1318 aa28.31■■■□□ 2.12
CACNA1C-230ENST00000543114 SPATA31A1Q5TZJ5 1347 aa28.3■■■□□ 2.12
CACNA1C-230ENST00000543114 STRN4Q9NRL3 753 aa28.3■■■□□ 2.12
CACNA1C-230ENST00000543114 TNS1Q9HBL0 1735 aaKnown RBP28.29■■■□□ 2.12
CACNA1C-230ENST00000543114 ABTB2Q8N961 1025 aa28.29■■■□□ 2.12
CACNA1C-230ENST00000543114 CAMTA1Q9Y6Y1 1673 aa28.29■■■□□ 2.12
CACNA1C-230ENST00000543114 SSH2Q76I76 1423 aa28.28■■■□□ 2.12
CACNA1C-230ENST00000543114 FAM182BQ5T319 152 aa28.28■■■□□ 2.12
CACNA1C-230ENST00000543114 CPDO75976 1380 aa28.27■■■□□ 2.12
CACNA1C-230ENST00000543114 USP6P35125 1406 aa28.26■■■□□ 2.12
CACNA1C-230ENST00000543114 PIK3C2AO00443 1686 aa28.24■■■□□ 2.11
CACNA1C-230ENST00000543114 BRD4O60885 1362 aaPredicted RBP28.24■■■□□ 2.11
CACNA1C-230ENST00000543114 ROCK2O75116 1388 aaKnown RBP28.24■■■□□ 2.11
CACNA1C-230ENST00000543114 NEUROD1Q13562 356 aa28.23■■■□□ 2.11
CACNA1C-230ENST00000543114 CABP1Q9NZU7 370 aa28.22■■■□□ 2.11
CACNA1C-230ENST00000543114 SLIT3O75094 1523 aa28.22■■■□□ 2.11
CACNA1C-230ENST00000543114 BAG6P46379 1132 aa28.21■■■□□ 2.11
CACNA1C-230ENST00000543114 NLRP13Q86W25 1043 aa28.21■■■□□ 2.11
CACNA1C-230ENST00000543114 AKAP12Q02952 1782 aa28.2■■■□□ 2.11
CACNA1C-230ENST00000543114 USP35Q9P2H5 1018 aa28.2■■■□□ 2.1
CACNA1C-230ENST00000543114 GCP02774 474 aa28.19■■■□□ 2.1
CACNA1C-230ENST00000543114 COL5A2P05997 1499 aaPredicted RBP28.19■■■□□ 2.1
CACNA1C-230ENST00000543114 EVC2Q86UK5 1308 aa28.18■■■□□ 2.1
CACNA1C-230ENST00000543114 LARP1Q6PKG0 1096 aaKnown RBP28.18■■■□□ 2.1
CACNA1C-230ENST00000543114 DISP2A7MBM2 1401 aa28.18■■■□□ 2.1
CACNA1C-230ENST00000543114 EVA1CP58658 441 aa28.17■■■□□ 2.1
CACNA1C-230ENST00000543114 LRP5O75197 1615 aa28.16■■■□□ 2.1
CACNA1C-230ENST00000543114 EN1Q05925 392 aaPredicted RBP28.15■■■□□ 2.1
CACNA1C-230ENST00000543114 BARGINQ6ZT62 677 aa28.15■■■□□ 2.1
CACNA1C-230ENST00000543114 PARP4Q9UKK3 1724 aaKnown RBP28.14■■■□□ 2.1
CACNA1C-230ENST00000543114 NLRP6P59044 892 aa28.13■■■□□ 2.09
CACNA1C-230ENST00000543114 COL18A1P39060 1754 aa28.13■■■□□ 2.09
CACNA1C-230ENST00000543114 TCP11L2Q8N4U5 519 aa28.11■■■□□ 2.09
CACNA1C-230ENST00000543114 PSDA5PKW4 1024 aaPredicted RBP28.1■■■□□ 2.09
CACNA1C-230ENST00000543114 MON2Q7Z3U7 1717 aa28.09■■■□□ 2.09
CACNA1C-230ENST00000543114 FAM196AQ6ZSG2 479 aa28.09■■■□□ 2.09
CACNA1C-230ENST00000543114 AATKQ6ZMQ8 1374 aa28.09■■■□□ 2.09
CACNA1C-230ENST00000543114 CRB1P82279 1406 aa28.09■■■□□ 2.09
CACNA1C-230ENST00000543114 WNK3Q9BYP7 1800 aa28.08■■■□□ 2.09
CACNA1C-230ENST00000543114 ZBTB7CA1YPR0 619 aa28.08■■■□□ 2.09
CACNA1C-230ENST00000543114 TRIM37O94972 964 aa28.08■■■□□ 2.09
CACNA1C-230ENST00000543114 LRRC37A3O60309 1634 aa28.07■■■□□ 2.08
CACNA1C-230ENST00000543114 CPSF1Q10570 1443 aaKnown RBP28.07■■■□□ 2.08
CACNA1C-230ENST00000543114 THRAP3Q9Y2W1 955 aaKnown RBP28.06■■■□□ 2.08
CACNA1C-230ENST00000543114 SBNO2Q9Y2G9 1366 aa28.06■■■□□ 2.08
CACNA1C-230ENST00000543114 RREB1Q92766 1687 aa28.06■■■□□ 2.08
CACNA1C-230ENST00000543114 PDE3BQ13370 1112 aa28.05■■■□□ 2.08
CACNA1C-230ENST00000543114 EZH2Q15910 746 aaKnown RBP28.05■■■□□ 2.08
CACNA1C-230ENST00000543114 TTC21BQ7Z4L5 1316 aa28.05■■■□□ 2.08
CACNA1C-230ENST00000543114 RGPD5Q99666 1765 aa28.05■■■□□ 2.08
CACNA1C-230ENST00000543114 PEAK1Q9H792 1746 aa28.03■■■□□ 2.08
CACNA1C-230ENST00000543114 NFAT5O94916 1531 aa28.02■■■□□ 2.08
CACNA1C-230ENST00000543114 NUP188Q5SRE5 1749 aa28.02■■■□□ 2.08
CACNA1C-230ENST00000543114 CAMKK2Q96RR4 588 aa28.01■■■□□ 2.07
CACNA1C-230ENST00000543114 ZNF692Q9BU19 519 aaPredicted RBP28.01■■■□□ 2.07
CACNA1C-230ENST00000543114 KTN1Q86UP2 1357 aaKnown RBP28■■■□□ 2.07
CACNA1C-230ENST00000543114 TTC21AQ8NDW8 1320 aa28■■■□□ 2.07
CACNA1C-230ENST00000543114 APBA3O96018 575 aa27.99■■■□□ 2.07
CACNA1C-230ENST00000543114 CARD11Q9BXL7 1154 aa27.99■■■□□ 2.07
CACNA1C-230ENST00000543114 AXIN2Q9Y2T1 843 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms