RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 PLCD4Q9BRC7 762 aa12.8□□□□□ -0.36
GABRB3-204ENST00000541819 TRIM5Q9C035 493 aa12.8□□□□□ -0.36
GABRB3-204ENST00000541819 CNNM1Q9NRU3 951 aa12.8□□□□□ -0.36
GABRB3-204ENST00000541819 BCL11BQ9C0K0 894 aaPredicted RBP12.8□□□□□ -0.36
GABRB3-204ENST00000541819 DHX57Q6P158 1386 aaKnown RBP12.8□□□□□ -0.36
GABRB3-204ENST00000541819 SMG6Q86US8 1419 aaKnown RBP12.8□□□□□ -0.36
GABRB3-204ENST00000541819 CCDC30Q5VVM6 783 aa12.8□□□□□ -0.36
GABRB3-204ENST00000541819 AAMPQ13685 434 aa12.79□□□□□ -0.36
GABRB3-204ENST00000541819 ERC1Q8IUD2 1116 aa12.79□□□□□ -0.36
GABRB3-204ENST00000541819 DACH1Q9UI36 760 aa12.79□□□□□ -0.36
GABRB3-204ENST00000541819 ZBED9Q6R2W3 1325 aa12.79□□□□□ -0.36
GABRB3-204ENST00000541819 GPRASP1Q5JY77 1395 aa12.79□□□□□ -0.36
GABRB3-204ENST00000541819 CCDC97Q96F63 343 aaPredicted RBP12.79□□□□□ -0.36
GABRB3-204ENST00000541819 DEF6Q9H4E7 631 aa12.79□□□□□ -0.36
GABRB3-204ENST00000541819 SOGA3Q5TF21 947 aa12.78□□□□□ -0.36
GABRB3-204ENST00000541819 LEKR1Q6ZMV7 388 aa12.78□□□□□ -0.36
GABRB3-204ENST00000541819 GNAI3P08754 354 aa12.78□□□□□ -0.36
GABRB3-204ENST00000541819 STK38Q15208 465 aa12.78□□□□□ -0.36
GABRB3-204ENST00000541819 CCDC181Q5TID7 509 aa12.78□□□□□ -0.36
GABRB3-204ENST00000541819 JMYQ8N9B5 988 aa12.78□□□□□ -0.36
GABRB3-204ENST00000541819 ZHX3Q9H4I2 956 aa12.78□□□□□ -0.36
GABRB3-204ENST00000541819 GOLGA6L7A0A1B0GV03 622 aa12.78□□□□□ -0.36
GABRB3-204ENST00000541819 CT47B1P0C2W7 299 aaPredicted RBP12.78□□□□□ -0.36
GABRB3-204ENST00000541819 TRIM21P19474 475 aaKnown RBP12.78□□□□□ -0.36
GABRB3-204ENST00000541819 RABEP1Q15276 862 aa12.78□□□□□ -0.36
GABRB3-204ENST00000541819 TANGO6Q9C0B7 1094 aa12.78□□□□□ -0.36
GABRB3-204ENST00000541819 PDCP20941 246 aa12.78□□□□□ -0.36
GABRB3-204ENST00000541819 JPH4Q96JJ6 628 aa12.78□□□□□ -0.36
GABRB3-204ENST00000541819 DHX8Q14562 1220 aaKnown RBP12.78□□□□□ -0.36
GABRB3-204ENST00000541819 NACAP1Q9BZK3 213 aa12.77□□□□□ -0.36
GABRB3-204ENST00000541819 RAPGEF2Q9Y4G8 1499 aa12.77□□□□□ -0.36
GABRB3-204ENST00000541819 PLEKHO1Q53GL0 409 aaPredicted RBP12.77□□□□□ -0.36
GABRB3-204ENST00000541819 NUTM2GQ5VZR2 741 aa12.77□□□□□ -0.37
GABRB3-204ENST00000541819 RBM5P52756 815 aaKnown RBP eCLIP12.77□□□□□ -0.37
GABRB3-204ENST00000541819 GAS2L2Q8NHY3 880 aa12.77□□□□□ -0.37
GABRB3-204ENST00000541819 MATR3P43243 847 aaKnown RBP eCLIP12.76□□□□□ -0.37
GABRB3-204ENST00000541819 TRIM22Q8IYM9 498 aa12.76□□□□□ -0.37
GABRB3-204ENST00000541819 GBP2P32456 591 aaPredicted RBP12.76□□□□□ -0.37
GABRB3-204ENST00000541819 NASPP49321 788 aaPredicted RBP12.76□□□□□ -0.37
GABRB3-204ENST00000541819 PPFIBP1Q86W92 1011 aa12.76□□□□□ -0.37
GABRB3-204ENST00000541819 TSPY26PQ9H489 355 aa12.76□□□□□ -0.37
GABRB3-204ENST00000541819 CCDC69A6NI79 296 aa12.76□□□□□ -0.37
GABRB3-204ENST00000541819 CECR2Q9BXF3 1484 aa12.76□□□□□ -0.37
GABRB3-204ENST00000541819 SURF6O75683 361 aaKnown RBP12.75□□□□□ -0.37
GABRB3-204ENST00000541819 CYB5RLQ6IPT4 315 aa12.75□□□□□ -0.37
GABRB3-204ENST00000541819 MTERF4Q7Z6M4 381 aaKnown RBP12.75□□□□□ -0.37
GABRB3-204ENST00000541819 FMNL2Q96PY5 1086 aa12.75□□□□□ -0.37
GABRB3-204ENST00000541819 DNAI2Q9GZS0 605 aa12.75□□□□□ -0.37
GABRB3-204ENST00000541819 SMARCA2P51531 1590 aa12.75□□□□□ -0.37
GABRB3-204ENST00000541819 NLRP6P59044 892 aa12.75□□□□□ -0.37
GABRB3-204ENST00000541819 CCDC66A2RUB6 948 aa12.75□□□□□ -0.37
GABRB3-204ENST00000541819 SERPINC1P01008 464 aa12.75□□□□□ -0.37
GABRB3-204ENST00000541819 CCDC57Q2TAC2 916 aa12.75□□□□□ -0.37
GABRB3-204ENST00000541819 MBD3O95983 291 aa12.75□□□□□ -0.37
GABRB3-204ENST00000541819 MCM2P49736 904 aa12.75□□□□□ -0.37
GABRB3-204ENST00000541819 NOL7Q9UMY1 257 aaKnown RBP12.75□□□□□ -0.37
GABRB3-204ENST00000541819 PRKRIP1Q9H875 184 aaPredicted RBP12.74□□□□□ -0.37
GABRB3-204ENST00000541819 KIAA0754O94854 1291 aa12.74□□□□□ -0.37
GABRB3-204ENST00000541819 SEPT11Q9NVA2 429 aaKnown RBP12.74□□□□□ -0.37
GABRB3-204ENST00000541819 ZSCAN25Q6NSZ9 544 aa12.73□□□□□ -0.37
GABRB3-204ENST00000541819 PTPRGP23470 1445 aa12.73□□□□□ -0.37
GABRB3-204ENST00000541819 TATP17735 454 aaPredicted RBP12.73□□□□□ -0.37
GABRB3-204ENST00000541819 MRE11P49959 708 aa12.73□□□□□ -0.37
GABRB3-204ENST00000541819 RNF214Q8ND24 703 aa12.73□□□□□ -0.37
GABRB3-204ENST00000541819 BMP2KQ9NSY1 1161 aaPredicted RBP12.73□□□□□ -0.37
GABRB3-204ENST00000541819 STRN4Q9NRL3 753 aa12.72□□□□□ -0.37
GABRB3-204ENST00000541819 TAX1BP1Q86VP1 789 aa12.72□□□□□ -0.37
GABRB3-204ENST00000541819 IQCEQ6IPM2 695 aa12.72□□□□□ -0.37
GABRB3-204ENST00000541819 ANKRD1Q15327 319 aa12.72□□□□□ -0.37
GABRB3-204ENST00000541819 HSP90AB3PQ58FF7 597 aa12.72□□□□□ -0.37
GABRB3-204ENST00000541819 CCDC112Q8NEF3 446 aa12.72□□□□□ -0.37
GABRB3-204ENST00000541819 CBFA2T2O43439 604 aa12.71□□□□□ -0.37
GABRB3-204ENST00000541819 ZNF76P36508 570 aa12.71□□□□□ -0.37
GABRB3-204ENST00000541819 AEBP1Q8IUX7 1158 aa12.71□□□□□ -0.37
GABRB3-204ENST00000541819 ABTB2Q8N961 1025 aa12.71□□□□□ -0.37
GABRB3-204ENST00000541819 PPM1FP49593 454 aaPredicted RBP12.71□□□□□ -0.37
GABRB3-204ENST00000541819 CEBPZQ03701 1054 aaKnown RBP12.71□□□□□ -0.37
GABRB3-204ENST00000541819 ABCC8Q09428 1581 aa12.71□□□□□ -0.37
GABRB3-204ENST00000541819 GGNBP2Q9H3C7 697 aa12.71□□□□□ -0.37
GABRB3-204ENST00000541819 ESCO1Q5FWF5 840 aa12.71□□□□□ -0.38
GABRB3-204ENST00000541819 POTEJP0CG39 1038 aa12.7□□□□□ -0.38
GABRB3-204ENST00000541819 JAKMIP3Q5VZ66 844 aa12.7□□□□□ -0.38
GABRB3-204ENST00000541819 ERLIN1O75477 346 aa12.7□□□□□ -0.38
GABRB3-204ENST00000541819 CABP4P57796 275 aa12.7□□□□□ -0.38
GABRB3-204ENST00000541819 ZSCAN29Q8IWY8 852 aaPredicted RBP12.7□□□□□ -0.38
GABRB3-204ENST00000541819 NUP133Q8WUM0 1156 aa12.7□□□□□ -0.38
GABRB3-204ENST00000541819 STK11IPQ8N1F8 1099 aa12.7□□□□□ -0.38
GABRB3-204ENST00000541819 CAVIN1Q6NZI2 390 aaKnown RBP12.7□□□□□ -0.38
GABRB3-204ENST00000541819 INCENPQ9NQS7 918 aa12.69□□□□□ -0.38
GABRB3-204ENST00000541819 GNAI2P04899 355 aa12.69□□□□□ -0.38
GABRB3-204ENST00000541819 CYP46A1Q9Y6A2 500 aa12.69□□□□□ -0.38
GABRB3-204ENST00000541819 CDKL5O76039 1030 aa12.69□□□□□ -0.38
GABRB3-204ENST00000541819 NEK4P51957 841 aa12.69□□□□□ -0.38
GABRB3-204ENST00000541819 MPHOSPH8Q99549 860 aa12.69□□□□□ -0.38
GABRB3-204ENST00000541819 CABP2Q9NPB3 220 aa12.69□□□□□ -0.38
GABRB3-204ENST00000541819 FAM69CQ0P6D2 419 aa12.69□□□□□ -0.38
GABRB3-204ENST00000541819 CCDC88BA6NC98 1476 aa12.69□□□□□ -0.38
GABRB3-204ENST00000541819 EIF3JO75822 258 aaKnown RBP12.69□□□□□ -0.38
GABRB3-204ENST00000541819 SSBP05455 408 aaKnown RBP eCLIP12.69□□□□□ -0.38
GABRB3-204ENST00000541819 IBSPP21815 317 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 213 ms