RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.8■■■■□ 3.64
CCM2-218ENST00000541586 KNSTRNQ9Y448 316 aa37.79■■■■□ 3.64
CCM2-218ENST00000541586 USP6P35125 1406 aa37.78■■■■□ 3.64
CCM2-218ENST00000541586 CARD14Q9BXL6 1004 aa37.78■■■■□ 3.64
CCM2-218ENST00000541586 NHSL1Q5SYE7 1610 aa37.78■■■■□ 3.64
CCM2-218ENST00000541586 AHDC1Q5TGY3 1603 aaPredicted RBP37.77■■■■□ 3.64
CCM2-218ENST00000541586 RALBP1Q15311 655 aa37.76■■■■□ 3.64
CCM2-218ENST00000541586 LRRC59Q96AG4 307 aaKnown RBP37.76■■■■□ 3.64
CCM2-218ENST00000541586 PHLPP1O60346 1717 aa37.76■■■■□ 3.64
CCM2-218ENST00000541586 PXDNQ92626 1479 aa37.76■■■■□ 3.64
CCM2-218ENST00000541586 PLEKHG5O94827 1062 aa37.75■■■■□ 3.63
CCM2-218ENST00000541586 PARD3Q8TEW0 1356 aa37.74■■■■□ 3.63
CCM2-218ENST00000541586 TTC21BQ7Z4L5 1316 aa37.73■■■■□ 3.63
CCM2-218ENST00000541586 CC2D1BQ5T0F9 858 aaKnown RBP37.73■■■■□ 3.63
CCM2-218ENST00000541586 AKAP12Q02952 1782 aa37.72■■■■□ 3.63
CCM2-218ENST00000541586 CCDC184Q52MB2 194 aa37.72■■■■□ 3.63
CCM2-218ENST00000541586 AMER1Q5JTC6 1135 aaPredicted RBP37.72■■■■□ 3.63
CCM2-218ENST00000541586 NUTM2GQ5VZR2 741 aa37.72■■■■□ 3.63
CCM2-218ENST00000541586 ABTB2Q8N961 1025 aa37.71■■■■□ 3.63
CCM2-218ENST00000541586 SPATA31A3Q5VYP0 1347 aa37.7■■■■□ 3.63
CCM2-218ENST00000541586 SBNO1A3KN83 1393 aa37.69■■■■□ 3.62
CCM2-218ENST00000541586 NSD3Q9BZ95 1437 aa37.68■■■■□ 3.62
CCM2-218ENST00000541586 EDC4Q6P2E9 1401 aaKnown RBP37.68■■■■□ 3.62
CCM2-218ENST00000541586 SSH2Q76I76 1423 aa37.66■■■■□ 3.62
CCM2-218ENST00000541586 MYBBP1AQ9BQG0 1328 aaKnown RBP37.66■■■■□ 3.62
CCM2-218ENST00000541586 NPC1L1Q9UHC9 1359 aa37.65■■■■□ 3.62
CCM2-218ENST00000541586 MRS2Q9HD23 443 aa37.65■■■■□ 3.62
CCM2-218ENST00000541586 MON2Q7Z3U7 1717 aa37.65■■■■□ 3.62
CCM2-218ENST00000541586 NME9Q86XW9 330 aa37.64■■■■□ 3.62
CCM2-218ENST00000541586 COL16A1Q07092 1604 aaPredicted RBP37.64■■■■□ 3.62
CCM2-218ENST00000541586 TNS3Q68CZ2 1445 aa37.64■■■■□ 3.62
CCM2-218ENST00000541586 BRD4O60885 1362 aaPredicted RBP37.64■■■■□ 3.62
CCM2-218ENST00000541586 TTC21AQ8NDW8 1320 aa37.63■■■■□ 3.61
CCM2-218ENST00000541586 NLRP6P59044 892 aa37.63■■■■□ 3.61
CCM2-218ENST00000541586 ZRANB1Q9UGI0 708 aa37.62■■■■□ 3.61
CCM2-218ENST00000541586 TRPM3Q9HCF6 1732 aaPredicted RBP37.62■■■■□ 3.61
CCM2-218ENST00000541586 FYB1O15117 783 aa37.58■■■■□ 3.61
CCM2-218ENST00000541586 ILDR1Q86SU0 546 aaPredicted RBP37.58■■■■□ 3.61
CCM2-218ENST00000541586 GGNBP2Q9H3C7 697 aa37.58■■■■□ 3.61
CCM2-218ENST00000541586 CGNL1Q0VF96 1302 aa37.58■■■■□ 3.61
CCM2-218ENST00000541586 ARHGEF10O15013 1369 aa37.57■■■■□ 3.61
CCM2-218ENST00000541586 CABLES1Q8TDN4 633 aa37.57■■■■□ 3.6
CCM2-218ENST00000541586 NRKQ7Z2Y5 1582 aa37.56■■■■□ 3.6
CCM2-218ENST00000541586 NLRP13Q86W25 1043 aa37.56■■■■□ 3.6
CCM2-218ENST00000541586 JCADQ9P266 1359 aa37.54■■■■□ 3.6
CCM2-218ENST00000541586 PNPLA6Q8IY17 1366 aa37.54■■■■□ 3.6
CCM2-218ENST00000541586 COG3Q96JB2 828 aa37.51■■■■□ 3.6
CCM2-218ENST00000541586 ALS2Q96Q42 1657 aa37.51■■■■□ 3.6
CCM2-218ENST00000541586 NUTM2BA6NNL0 878 aaPredicted RBP37.5■■■■□ 3.59
CCM2-218ENST00000541586 NUTM2EB1AL46 878 aaPredicted RBP37.5■■■■□ 3.59
CCM2-218ENST00000541586 SOX12O15370 315 aa37.5■■■■□ 3.59
CCM2-218ENST00000541586 HAP1P54257 671 aaPredicted RBP37.5■■■■□ 3.59
CCM2-218ENST00000541586 NUTM2AQ8IVF1 878 aaPredicted RBP37.5■■■■□ 3.59
CCM2-218ENST00000541586 CENPBP07199 599 aaPredicted RBP37.49■■■■□ 3.59
CCM2-218ENST00000541586 PIK3C2AO00443 1686 aa37.49■■■■□ 3.59
CCM2-218ENST00000541586 FAM9BQ8IZU0 186 aa37.43■■■■□ 3.58
CCM2-218ENST00000541586 USP31Q70CQ4 1352 aa37.43■■■■□ 3.58
CCM2-218ENST00000541586 PPP2R1AP30153 589 aa37.42■■■■□ 3.58
CCM2-218ENST00000541586 GCP02774 474 aa37.41■■■■□ 3.58
CCM2-218ENST00000541586 TNNT2P45379 298 aaPredicted RBP37.41■■■■□ 3.58
CCM2-218ENST00000541586 MORC1Q86VD1 984 aa37.4■■■■□ 3.58
CCM2-218ENST00000541586 NSD2O96028 1365 aa37.39■■■■□ 3.58
CCM2-218ENST00000541586 FBLN1P23142 703 aa37.39■■■■□ 3.58
CCM2-218ENST00000541586 KIF20BQ96Q89 1820 aa37.39■■■■□ 3.58
CCM2-218ENST00000541586 USP19O94966 1318 aa37.38■■■■□ 3.57
CCM2-218ENST00000541586 SHPRHQ149N8 1683 aa37.38■■■■□ 3.57
CCM2-218ENST00000541586 ADAMTS2O95450 1211 aa37.38■■■■□ 3.57
CCM2-218ENST00000541586 ZC3H6P61129 1189 aaKnown RBP37.38■■■■□ 3.57
CCM2-218ENST00000541586 PNISRQ8TF01 805 aaKnown RBP37.38■■■■□ 3.57
CCM2-218ENST00000541586 SPATA31A6Q5VVP1 1343 aa37.38■■■■□ 3.57
CCM2-218ENST00000541586 OVOS2A0A0J9YW53 1432 aa37.37■■■■□ 3.57
CCM2-218ENST00000541586 OVOS2Q6IE36 1432 aa37.37■■■■□ 3.57
CCM2-218ENST00000541586 MED1Q15648 1581 aaPredicted RBP37.37■■■■□ 3.57
CCM2-218ENST00000541586 ZBTB7CA1YPR0 619 aa37.36■■■■□ 3.57
CCM2-218ENST00000541586 KCNH5Q8NCM2 988 aa37.36■■■■□ 3.57
CCM2-218ENST00000541586 COL22A1Q8NFW1 1626 aaPredicted RBP37.33■■■■□ 3.57
CCM2-218ENST00000541586 MARF1Q9Y4F3 1742 aaKnown RBP37.29■■■■□ 3.56
CCM2-218ENST00000541586 MEX3CQ5U5Q3 659 aaKnown RBP37.28■■■■□ 3.56
CCM2-218ENST00000541586 RRS1Q15050 365 aaKnown RBP37.27■■■■□ 3.56
CCM2-218ENST00000541586 SLIT3O75094 1523 aa37.26■■■■□ 3.55
CCM2-218ENST00000541586 CHRNA2Q15822 529 aa37.25■■■■□ 3.55
CCM2-218ENST00000541586 PHRF1Q9P1Y6 1649 aaKnown RBP37.25■■■■□ 3.55
CCM2-218ENST00000541586 PRDM11Q9NQV5 511 aa37.24■■■■□ 3.55
CCM2-218ENST00000541586 KIAA0232Q92628 1395 aa37.24■■■■□ 3.55
CCM2-218ENST00000541586 HNRNPUQ00839 825 aaKnown RBP eCLIP37.24■■■■□ 3.55
CCM2-218ENST00000541586 ANKRD26Q9UPS8 1709 aa37.24■■■■□ 3.55
CCM2-218ENST00000541586 CRYBG1Q9Y4K1 1723 aa37.23■■■■□ 3.55
CCM2-218ENST00000541586 USP54Q70EL1 1684 aa37.22■■■■□ 3.55
CCM2-218ENST00000541586 C8orf37Q96NL8 207 aa37.22■■■■□ 3.55
CCM2-218ENST00000541586 LRP6O75581 1613 aa37.22■■■■□ 3.55
CCM2-218ENST00000541586 FAM83GA6ND36 823 aa37.22■■■■□ 3.55
CCM2-218ENST00000541586 PPM1GO15355 546 aaPredicted RBP37.22■■■■□ 3.55
CCM2-218ENST00000541586 ABCA3Q99758 1704 aa37.21■■■■□ 3.55
CCM2-218ENST00000541586 ARHGEF25Q86VW2 580 aa37.21■■■■□ 3.55
CCM2-218ENST00000541586 NGLY1Q96IV0 654 aa37.18■■■■□ 3.54
CCM2-218ENST00000541586 EMILIN1Q9Y6C2 1016 aa37.18■■■■□ 3.54
CCM2-218ENST00000541586 NFAT5O94916 1531 aa37.18■■■■□ 3.54
CCM2-218ENST00000541586 MAP3K19Q56UN5 1328 aa37.18■■■■□ 3.54
CCM2-218ENST00000541586 AMPHP49418 695 aa37.17■■■■□ 3.54
CCM2-218ENST00000541586 POLKQ9UBT6 870 aa37.16■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms