RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-204ENST00000540504 ONECUT3O60422 494 aaPredicted RBP24.13■■□□□ 1.45
PSMD3-204ENST00000540504 CCDC9Q9Y3X0 531 aaKnown RBP24.13■■□□□ 1.45
PSMD3-204ENST00000540504 POLR3AO14802 1390 aaPredicted RBP24.13■■□□□ 1.45
PSMD3-204ENST00000540504 EP400Q96L91 3159 aa24.13■■□□□ 1.45
PSMD3-204ENST00000540504 NRAPQ86VF7 1730 aa24.12■■□□□ 1.45
PSMD3-204ENST00000540504 SEPT12Q8IYM1 358 aa24.11■■□□□ 1.45
PSMD3-204ENST00000540504 BRWD3Q6RI45 1802 aa24.11■■□□□ 1.45
PSMD3-204ENST00000540504 PLEKHG3A1L390 1219 aa24.1■■□□□ 1.45
PSMD3-204ENST00000540504 BTG4Q9NY30 223 aa24.1■■□□□ 1.45
PSMD3-204ENST00000540504 CENPJQ9HC77 1338 aaPredicted RBP24.1■■□□□ 1.45
PSMD3-204ENST00000540504 L3MBTL2Q969R5 705 aa24.09■■□□□ 1.45
PSMD3-204ENST00000540504 ACEP12821 1306 aa24.09■■□□□ 1.45
PSMD3-204ENST00000540504 NBPF8Q3BBV2 869 aa24.08■■□□□ 1.45
PSMD3-204ENST00000540504 BLMP54132 1417 aaPredicted RBP24.06■■□□□ 1.44
PSMD3-204ENST00000540504 PRDM11Q9NQV5 511 aa24.05■■□□□ 1.44
PSMD3-204ENST00000540504 PHRF1Q9P1Y6 1649 aaKnown RBP24.05■■□□□ 1.44
PSMD3-204ENST00000540504 SRPK2P78362 688 aaKnown RBP24.04■■□□□ 1.44
PSMD3-204ENST00000540504 KRT27Q7Z3Y8 459 aa24.04■■□□□ 1.44
PSMD3-204ENST00000540504 QRICH2Q9H0J4 1663 aa24.04■■□□□ 1.44
PSMD3-204ENST00000540504 SIN3AQ96ST3 1273 aa24.03■■□□□ 1.44
PSMD3-204ENST00000540504 TRPM1Q7Z4N2 1603 aa24.02■■□□□ 1.44
PSMD3-204ENST00000540504 BRD4O60885 1362 aaPredicted RBP24.02■■□□□ 1.44
PSMD3-204ENST00000540504 PPIP5K1Q6PFW1 1433 aa24.01■■□□□ 1.43
PSMD3-204ENST00000540504 SPATA31A5Q5VU36 1347 aa24.01■■□□□ 1.43
PSMD3-204ENST00000540504 SPATA31A7Q8IWB4 1347 aa24.01■■□□□ 1.43
PSMD3-204ENST00000540504 KIAA0232Q92628 1395 aa24.01■■□□□ 1.43
PSMD3-204ENST00000540504 A0A0G2JS52 829 aa24■■□□□ 1.43
PSMD3-204ENST00000540504 MYT1Q01538 1121 aa24■■□□□ 1.43
PSMD3-204ENST00000540504 FAM98CQ17RN3 349 aaKnown RBP24■■□□□ 1.43
PSMD3-204ENST00000540504 ZRANB1Q9UGI0 708 aa24■■□□□ 1.43
PSMD3-204ENST00000540504 SF3B2Q13435 895 aaKnown RBP23.99■■□□□ 1.43
PSMD3-204ENST00000540504 ABTB2Q8N961 1025 aa23.99■■□□□ 1.43
PSMD3-204ENST00000540504 CABP2Q9NPB3 220 aa23.99■■□□□ 1.43
PSMD3-204ENST00000540504 NEUROD1Q13562 356 aa23.98■■□□□ 1.43
PSMD3-204ENST00000540504 NUTM2GQ5VZR2 741 aa23.97■■□□□ 1.43
PSMD3-204ENST00000540504 ROCK2O75116 1388 aaKnown RBP23.96■■□□□ 1.43
PSMD3-204ENST00000540504 EVC2Q86UK5 1308 aa23.96■■□□□ 1.43
PSMD3-204ENST00000540504 ZC3H6P61129 1189 aaKnown RBP23.96■■□□□ 1.43
PSMD3-204ENST00000540504 NLRP13Q86W25 1043 aa23.96■■□□□ 1.43
PSMD3-204ENST00000540504 NRKQ7Z2Y5 1582 aa23.95■■□□□ 1.43
PSMD3-204ENST00000540504 USP19O94966 1318 aa23.95■■□□□ 1.42
PSMD3-204ENST00000540504 CHRNA2Q15822 529 aa23.94■■□□□ 1.42
PSMD3-204ENST00000540504 CPDO75976 1380 aa23.93■■□□□ 1.42
PSMD3-204ENST00000540504 THSD7AQ9UPZ6 1657 aa23.93■■□□□ 1.42
PSMD3-204ENST00000540504 SPATA31A1Q5TZJ5 1347 aa23.93■■□□□ 1.42
PSMD3-204ENST00000540504 CABP1Q9NZU7 370 aa23.93■■□□□ 1.42
PSMD3-204ENST00000540504 USP6P35125 1406 aa23.92■■□□□ 1.42
PSMD3-204ENST00000540504 STRN4Q9NRL3 753 aa23.91■■□□□ 1.42
PSMD3-204ENST00000540504 DEFB132Q7Z7B7 95 aa23.9■■□□□ 1.42
PSMD3-204ENST00000540504 GCP02774 474 aa23.89■■□□□ 1.41
PSMD3-204ENST00000540504 EVA1CP58658 441 aa23.89■■□□□ 1.41
PSMD3-204ENST00000540504 LMO7Q8WWI1 1683 aa23.89■■□□□ 1.41
PSMD3-204ENST00000540504 SSH2Q76I76 1423 aa23.88■■□□□ 1.41
PSMD3-204ENST00000540504 CAMTA1Q9Y6Y1 1673 aa23.87■■□□□ 1.41
PSMD3-204ENST00000540504 BAG6P46379 1132 aa23.87■■□□□ 1.41
PSMD3-204ENST00000540504 BARGINQ6ZT62 677 aa23.86■■□□□ 1.41
PSMD3-204ENST00000540504 ZNF692Q9BU19 519 aaPredicted RBP23.86■■□□□ 1.41
PSMD3-204ENST00000540504 RGPD1P0DJD0 1748 aa23.86■■□□□ 1.41
PSMD3-204ENST00000540504 NLRP6P59044 892 aa23.85■■□□□ 1.41
PSMD3-204ENST00000540504 SLIT3O75094 1523 aa23.84■■□□□ 1.41
PSMD3-204ENST00000540504 SBNO2Q9Y2G9 1366 aa23.83■■□□□ 1.41
PSMD3-204ENST00000540504 THRAP3Q9Y2W1 955 aaKnown RBP23.82■■□□□ 1.4
PSMD3-204ENST00000540504 AKAP12Q02952 1782 aa23.81■■□□□ 1.4
PSMD3-204ENST00000540504 PIK3C2AO00443 1686 aa23.81■■□□□ 1.4
PSMD3-204ENST00000540504 LARP1Q6PKG0 1096 aaKnown RBP23.81■■□□□ 1.4
PSMD3-204ENST00000540504 USP35Q9P2H5 1018 aa23.81■■□□□ 1.4
PSMD3-204ENST00000540504 TONSLQ96HA7 1378 aa23.8■■□□□ 1.4
PSMD3-204ENST00000540504 FAM182BQ5T319 152 aa23.8■■□□□ 1.4
PSMD3-204ENST00000540504 FAM196AQ6ZSG2 479 aa23.8■■□□□ 1.4
PSMD3-204ENST00000540504 TCP11L2Q8N4U5 519 aa23.8■■□□□ 1.4
PSMD3-204ENST00000540504 COL5A2P05997 1499 aaPredicted RBP23.8■■□□□ 1.4
PSMD3-204ENST00000540504 AATKQ6ZMQ8 1374 aa23.79■■□□□ 1.4
PSMD3-204ENST00000540504 CARD11Q9BXL7 1154 aa23.79■■□□□ 1.4
PSMD3-204ENST00000540504 TTC21AQ8NDW8 1320 aa23.79■■□□□ 1.4
PSMD3-204ENST00000540504 DISP2A7MBM2 1401 aa23.78■■□□□ 1.4
PSMD3-204ENST00000540504 CPSF1Q10570 1443 aaKnown RBP23.78■■□□□ 1.4
PSMD3-204ENST00000540504 TTC21BQ7Z4L5 1316 aa23.78■■□□□ 1.4
PSMD3-204ENST00000540504 PDE3BQ13370 1112 aa23.77■■□□□ 1.4
PSMD3-204ENST00000540504 TNS1Q9HBL0 1735 aaKnown RBP23.76■■□□□ 1.39
PSMD3-204ENST00000540504 SRCAPQ6ZRS2 3230 aa23.76■■□□□ 1.39
PSMD3-204ENST00000540504 KCNH5Q8NCM2 988 aa23.76■■□□□ 1.39
PSMD3-204ENST00000540504 CRB1P82279 1406 aa23.76■■□□□ 1.39
PSMD3-204ENST00000540504 EN1Q05925 392 aaPredicted RBP23.74■■□□□ 1.39
PSMD3-204ENST00000540504 KTN1Q86UP2 1357 aaKnown RBP23.74■■□□□ 1.39
PSMD3-204ENST00000540504 COL18A1P39060 1754 aa23.73■■□□□ 1.39
PSMD3-204ENST00000540504 ZBTB7CA1YPR0 619 aa23.73■■□□□ 1.39
PSMD3-204ENST00000540504 PARP4Q9UKK3 1724 aaKnown RBP23.73■■□□□ 1.39
PSMD3-204ENST00000540504 MON2Q7Z3U7 1717 aa23.72■■□□□ 1.39
PSMD3-204ENST00000540504 C11orf95C9JLR9 678 aaPredicted RBP23.71■■□□□ 1.39
PSMD3-204ENST00000540504 TRIM37O94972 964 aa23.71■■□□□ 1.39
PSMD3-204ENST00000540504 TRIM26Q12899 539 aaPredicted RBP23.71■■□□□ 1.39
PSMD3-204ENST00000540504 ARHGEF25Q86VW2 580 aa23.71■■□□□ 1.39
PSMD3-204ENST00000540504 PARD3Q8TEW0 1356 aa23.69■■□□□ 1.38
PSMD3-204ENST00000540504 PUS7Q96PZ0 661 aaKnown RBP23.69■■□□□ 1.38
PSMD3-204ENST00000540504 WDR17Q8IZU2 1322 aa23.68■■□□□ 1.38
PSMD3-204ENST00000540504 TOM1L2Q6ZVM7 507 aa23.67■■□□□ 1.38
PSMD3-204ENST00000540504 AXIN2Q9Y2T1 843 aa23.67■■□□□ 1.38
PSMD3-204ENST00000540504 APBA3O96018 575 aa23.66■■□□□ 1.38
PSMD3-204ENST00000540504 CAMKK2Q96RR4 588 aa23.66■■□□□ 1.38
PSMD3-204ENST00000540504 LRP5O75197 1615 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms