RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 PRR36Q9H6K5 1346 aa12.05□□□□□ -0.48
LRP6-204ENST00000540415 COL14A1Q05707 1796 aaKnown RBP12.04□□□□□ -0.48
LRP6-204ENST00000540415 SPATA31A1Q5TZJ5 1347 aa12.04□□□□□ -0.48
LRP6-204ENST00000540415 TRPM3Q9HCF6 1732 aaPredicted RBP12.03□□□□□ -0.48
LRP6-204ENST00000540415 UTRNP46939 3433 aa12.03□□□□□ -0.48
LRP6-204ENST00000540415 FAM196AQ6ZSG2 479 aa12.03□□□□□ -0.48
LRP6-204ENST00000540415 PRDM11Q9NQV5 511 aa12.03□□□□□ -0.48
LRP6-204ENST00000540415 STRN4Q9NRL3 753 aa12.03□□□□□ -0.48
LRP6-204ENST00000540415 ACIN1Q9UKV3 1341 aaKnown RBP12.03□□□□□ -0.48
LRP6-204ENST00000540415 USP35Q9P2H5 1018 aa12.02□□□□□ -0.49
LRP6-204ENST00000540415 KIAA0232Q92628 1395 aa12.02□□□□□ -0.49
LRP6-204ENST00000540415 ANKARQ7Z5J8 1434 aa12.02□□□□□ -0.49
LRP6-204ENST00000540415 ADGRB2O60241 1585 aa12.01□□□□□ -0.49
LRP6-204ENST00000540415 ALS2Q96Q42 1657 aa12.01□□□□□ -0.49
LRP6-204ENST00000540415 PAK3O75914 559 aaPredicted RBP12.01□□□□□ -0.49
LRP6-204ENST00000540415 POGKQ9P215 609 aa12.01□□□□□ -0.49
LRP6-204ENST00000540415 DHX57Q6P158 1386 aaKnown RBP12.01□□□□□ -0.49
LRP6-204ENST00000540415 NUTM2GQ5VZR2 741 aa12□□□□□ -0.49
LRP6-204ENST00000540415 PPP1R1BQ9UD71 204 aaPredicted RBP12□□□□□ -0.49
LRP6-204ENST00000540415 MINK1Q8N4C8 1332 aaPredicted RBP12□□□□□ -0.49
LRP6-204ENST00000540415 GPRASP1Q5JY77 1395 aa12□□□□□ -0.49
LRP6-204ENST00000540415 ZC3H6P61129 1189 aaKnown RBP11.99□□□□□ -0.49
LRP6-204ENST00000540415 MPHOSPH9Q99550 1183 aa11.99□□□□□ -0.49
LRP6-204ENST00000540415 PARD3Q8TEW0 1356 aa11.99□□□□□ -0.49
LRP6-204ENST00000540415 CRYBG1Q9Y4K1 1723 aa11.99□□□□□ -0.49
LRP6-204ENST00000540415 NUP188Q5SRE5 1749 aa11.98□□□□□ -0.49
LRP6-204ENST00000540415 RREB1Q92766 1687 aa11.98□□□□□ -0.49
LRP6-204ENST00000540415 KCNQ2O43526 872 aa11.98□□□□□ -0.49
LRP6-204ENST00000540415 NBPF8Q3BBV2 869 aa11.98□□□□□ -0.49
LRP6-204ENST00000540415 NBPF14Q5TI25 921 aa11.98□□□□□ -0.49
LRP6-204ENST00000540415 NGDNQ8NEJ9 315 aaKnown RBP11.98□□□□□ -0.49
LRP6-204ENST00000540415 SPON1Q9HCB6 807 aa11.98□□□□□ -0.49
LRP6-204ENST00000540415 TRAK1Q9UPV9 953 aa11.98□□□□□ -0.49
LRP6-204ENST00000540415 CAMTA1Q9Y6Y1 1673 aa11.97□□□□□ -0.49
LRP6-204ENST00000540415 PDE3BQ13370 1112 aa11.97□□□□□ -0.49
LRP6-204ENST00000540415 PDGFDQ9GZP0 370 aaPredicted RBP11.97□□□□□ -0.49
LRP6-204ENST00000540415 ANO8Q9HCE9 1232 aaPredicted RBP11.97□□□□□ -0.49
LRP6-204ENST00000540415 DLC1Q96QB1 1528 aa11.96□□□□□ -0.49
LRP6-204ENST00000540415 LARP1Q6PKG0 1096 aaKnown RBP11.96□□□□□ -0.49
LRP6-204ENST00000540415 TULP4Q9NRJ4 1543 aa11.96□□□□□ -0.5
LRP6-204ENST00000540415 SSH2Q76I76 1423 aa11.95□□□□□ -0.5
LRP6-204ENST00000540415 NINLQ9Y2I6 1382 aa11.95□□□□□ -0.5
LRP6-204ENST00000540415 WASLO00401 505 aaPredicted RBP11.95□□□□□ -0.5
LRP6-204ENST00000540415 BARGINQ6ZT62 677 aa11.95□□□□□ -0.5
LRP6-204ENST00000540415 PTF1AQ7RTS3 328 aa11.95□□□□□ -0.5
LRP6-204ENST00000540415 ADGRB1O14514 1584 aa11.95□□□□□ -0.5
LRP6-204ENST00000540415 ZNF784Q8NCA9 323 aaPredicted RBP11.94□□□□□ -0.5
LRP6-204ENST00000540415 EVA1CP58658 441 aa11.93□□□□□ -0.5
LRP6-204ENST00000540415 DCAF8L1A6NGE4 600 aa11.92□□□□□ -0.5
LRP6-204ENST00000540415 ZBTB7AO95365 584 aa11.92□□□□□ -0.5
LRP6-204ENST00000540415 TCP11L2Q8N4U5 519 aa11.92□□□□□ -0.5
LRP6-204ENST00000540415 PHRF1Q9P1Y6 1649 aaKnown RBP11.92□□□□□ -0.5
LRP6-204ENST00000540415 NRKQ7Z2Y5 1582 aa11.92□□□□□ -0.5
LRP6-204ENST00000540415 ATP7BP35670 1465 aa11.91□□□□□ -0.5
LRP6-204ENST00000540415 NUDT16Q96DE0 195 aaKnown RBP11.91□□□□□ -0.5
LRP6-204ENST00000540415 SENP3-EIF4A1A0A087X0R7 540 aa11.9□□□□□ -0.5
LRP6-204ENST00000540415 PTGER2P43116 358 aa11.9□□□□□ -0.5
LRP6-204ENST00000540415 ATF5Q9Y2D1 282 aaPredicted RBP11.9□□□□□ -0.5
LRP6-204ENST00000540415 EIF3AQ14152 1382 aaKnown RBP11.9□□□□□ -0.5
LRP6-204ENST00000540415 PROM2Q8N271 834 aa11.89□□□□□ -0.51
LRP6-204ENST00000540415 KDM2AQ9Y2K7 1162 aa11.88□□□□□ -0.51
LRP6-204ENST00000540415 ACEP12821 1306 aa11.87□□□□□ -0.51
LRP6-204ENST00000540415 CASZ1Q86V15 1759 aa11.87□□□□□ -0.51
LRP6-204ENST00000540415 MYOM1P52179 1685 aa11.87□□□□□ -0.51
LRP6-204ENST00000540415 LMO7Q8WWI1 1683 aa11.87□□□□□ -0.51
LRP6-204ENST00000540415 USP19O94966 1318 aa11.86□□□□□ -0.51
LRP6-204ENST00000540415 OVOS2A0A0G2JMS6 1433 aa11.86□□□□□ -0.51
LRP6-204ENST00000540415 OVOS2A0A0J9YW53 1432 aa11.86□□□□□ -0.51
LRP6-204ENST00000540415 OVOS2Q6IE36 1432 aa11.86□□□□□ -0.51
LRP6-204ENST00000540415 ZBTB7CA1YPR0 619 aa11.86□□□□□ -0.51
LRP6-204ENST00000540415 CDK19Q9BWU1 502 aa11.86□□□□□ -0.51
LRP6-204ENST00000540415 FHDC1Q9C0D6 1143 aaPredicted RBP11.86□□□□□ -0.51
LRP6-204ENST00000540415 BCL11BQ9C0K0 894 aaPredicted RBP11.86□□□□□ -0.51
LRP6-204ENST00000540415 CPDO75976 1380 aa11.86□□□□□ -0.51
LRP6-204ENST00000540415 COL5A2P05997 1499 aaPredicted RBP11.86□□□□□ -0.51
LRP6-204ENST00000540415 PEAK1Q9H792 1746 aa11.86□□□□□ -0.51
LRP6-204ENST00000540415 POLR3AO14802 1390 aaPredicted RBP11.85□□□□□ -0.51
LRP6-204ENST00000540415 PLSCR1O15162 318 aa11.85□□□□□ -0.51
LRP6-204ENST00000540415 C1QTNF8P60827 252 aa11.85□□□□□ -0.51
LRP6-204ENST00000540415 ABTB2Q8N961 1025 aa11.85□□□□□ -0.51
LRP6-204ENST00000540415 SYT17Q9BSW7 474 aa11.85□□□□□ -0.51
LRP6-204ENST00000540415 THRAP3Q9Y2W1 955 aaKnown RBP11.85□□□□□ -0.51
LRP6-204ENST00000540415 CEP350Q5VT06 3117 aa11.85□□□□□ -0.51
LRP6-204ENST00000540415 GCP02774 474 aa11.84□□□□□ -0.51
LRP6-204ENST00000540415 MARCH10Q8NA82 808 aaPredicted RBP11.84□□□□□ -0.51
LRP6-204ENST00000540415 PARP4Q9UKK3 1724 aaKnown RBP11.83□□□□□ -0.52
LRP6-204ENST00000540415 DCAF11Q8TEB1 546 aa11.83□□□□□ -0.52
LRP6-204ENST00000540415 CRB1P82279 1406 aa11.83□□□□□ -0.52
LRP6-204ENST00000540415 LRRC37A3O60309 1634 aa11.82□□□□□ -0.52
LRP6-204ENST00000540415 PLEKHG3A1L390 1219 aa11.82□□□□□ -0.52
LRP6-204ENST00000540415 DDB1Q16531 1140 aa11.82□□□□□ -0.52
LRP6-204ENST00000540415 IFFO2Q5TF58 517 aa11.82□□□□□ -0.52
LRP6-204ENST00000540415 SGIP1Q9BQI5 828 aa11.82□□□□□ -0.52
LRP6-204ENST00000540415 GOLGB1Q14789 3259 aaKnown RBP11.82□□□□□ -0.52
LRP6-204ENST00000540415 TXNRD1Q16881 649 aa11.81□□□□□ -0.52
LRP6-204ENST00000540415 CCDC61Q9Y6R9 512 aa11.81□□□□□ -0.52
LRP6-204ENST00000540415 TOPAZ1Q8N9V7 1692 aa11.81□□□□□ -0.52
LRP6-204ENST00000540415 SLC15A2Q16348 729 aa11.8□□□□□ -0.52
LRP6-204ENST00000540415 STK32BQ9NY57 414 aa11.8□□□□□ -0.52
LRP6-204ENST00000540415 AXIN2Q9Y2T1 843 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms