RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 ROCK2O75116 1388 aaKnown RBP27.35■■□□□ 1.97
TNFRSF1A-212ENST00000539372 PLCH1Q4KWH8 1693 aa27.34■■□□□ 1.97
TNFRSF1A-212ENST00000539372 QRICH2Q9H0J4 1663 aa27.34■■□□□ 1.97
TNFRSF1A-212ENST00000539372 TRIM26Q12899 539 aaPredicted RBP27.34■■□□□ 1.97
TNFRSF1A-212ENST00000539372 POLR3AO14802 1390 aaPredicted RBP27.34■■□□□ 1.97
TNFRSF1A-212ENST00000539372 PLEKHG3A1L390 1219 aa27.33■■□□□ 1.97
TNFRSF1A-212ENST00000539372 NBPF8Q3BBV2 869 aa27.33■■□□□ 1.97
TNFRSF1A-212ENST00000539372 GLI3P10071 1580 aa27.32■■□□□ 1.96
TNFRSF1A-212ENST00000539372 ATAD2Q6PL18 1390 aa27.32■■□□□ 1.96
TNFRSF1A-212ENST00000539372 NUTM2GQ5VZR2 741 aa27.31■■□□□ 1.96
TNFRSF1A-212ENST00000539372 CCDC9Q9Y3X0 531 aaKnown RBP27.31■■□□□ 1.96
TNFRSF1A-212ENST00000539372 VPS72Q15906 364 aa27.3■■□□□ 1.96
TNFRSF1A-212ENST00000539372 PPIP5K1Q6PFW1 1433 aa27.3■■□□□ 1.96
TNFRSF1A-212ENST00000539372 NWD2Q9ULI1 1742 aa27.3■■□□□ 1.96
TNFRSF1A-212ENST00000539372 BTG4Q9NY30 223 aa27.28■■□□□ 1.96
TNFRSF1A-212ENST00000539372 CRYBG1Q9Y4K1 1723 aa27.27■■□□□ 1.96
TNFRSF1A-212ENST00000539372 PRDM11Q9NQV5 511 aa27.24■■□□□ 1.95
TNFRSF1A-212ENST00000539372 COL14A1Q05707 1796 aaKnown RBP27.24■■□□□ 1.95
TNFRSF1A-212ENST00000539372 TONSLQ96HA7 1378 aa27.23■■□□□ 1.95
TNFRSF1A-212ENST00000539372 EVC2Q86UK5 1308 aa27.23■■□□□ 1.95
TNFRSF1A-212ENST00000539372 CABP1Q9NZU7 370 aa27.23■■□□□ 1.95
TNFRSF1A-212ENST00000539372 NRAPQ86VF7 1730 aa27.22■■□□□ 1.95
TNFRSF1A-212ENST00000539372 SEPT12Q8IYM1 358 aa27.22■■□□□ 1.95
TNFRSF1A-212ENST00000539372 ABTB2Q8N961 1025 aa27.22■■□□□ 1.95
TNFRSF1A-212ENST00000539372 KIAA0232Q92628 1395 aa27.21■■□□□ 1.95
TNFRSF1A-212ENST00000539372 ZC3H6P61129 1189 aaKnown RBP27.2■■□□□ 1.94
TNFRSF1A-212ENST00000539372 PHRF1Q9P1Y6 1649 aaKnown RBP27.19■■□□□ 1.94
TNFRSF1A-212ENST00000539372 CHRNA2Q15822 529 aa27.19■■□□□ 1.94
TNFRSF1A-212ENST00000539372 CARD11Q9BXL7 1154 aa27.17■■□□□ 1.94
TNFRSF1A-212ENST00000539372 A0A0G2JS52 829 aa27.16■■□□□ 1.94
TNFRSF1A-212ENST00000539372 ONECUT3O60422 494 aaPredicted RBP27.16■■□□□ 1.94
TNFRSF1A-212ENST00000539372 MYT1Q01538 1121 aa27.16■■□□□ 1.94
TNFRSF1A-212ENST00000539372 FAM98CQ17RN3 349 aaKnown RBP27.16■■□□□ 1.94
TNFRSF1A-212ENST00000539372 BRWD3Q6RI45 1802 aa27.16■■□□□ 1.94
TNFRSF1A-212ENST00000539372 EP400Q96L91 3159 aa27.14■■□□□ 1.94
TNFRSF1A-212ENST00000539372 USP6P35125 1406 aa27.14■■□□□ 1.93
TNFRSF1A-212ENST00000539372 NRKQ7Z2Y5 1582 aa27.13■■□□□ 1.93
TNFRSF1A-212ENST00000539372 USP19O94966 1318 aa27.13■■□□□ 1.93
TNFRSF1A-212ENST00000539372 SPATA31A5Q5VU36 1347 aa27.13■■□□□ 1.93
TNFRSF1A-212ENST00000539372 SPATA31A7Q8IWB4 1347 aa27.13■■□□□ 1.93
TNFRSF1A-212ENST00000539372 NLRP13Q86W25 1043 aa27.12■■□□□ 1.93
TNFRSF1A-212ENST00000539372 KRT27Q7Z3Y8 459 aa27.11■■□□□ 1.93
TNFRSF1A-212ENST00000539372 STRN4Q9NRL3 753 aa27.11■■□□□ 1.93
TNFRSF1A-212ENST00000539372 BRD4O60885 1362 aaPredicted RBP27.1■■□□□ 1.93
TNFRSF1A-212ENST00000539372 CCDC125Q86Z20 511 aa27.09■■□□□ 1.93
TNFRSF1A-212ENST00000539372 GCP02774 474 aa27.08■■□□□ 1.93
TNFRSF1A-212ENST00000539372 NLRP6P59044 892 aa27.07■■□□□ 1.92
TNFRSF1A-212ENST00000539372 SSH2Q76I76 1423 aa27.07■■□□□ 1.92
TNFRSF1A-212ENST00000539372 CPDO75976 1380 aa27.06■■□□□ 1.92
TNFRSF1A-212ENST00000539372 EVA1CP58658 441 aa27.05■■□□□ 1.92
TNFRSF1A-212ENST00000539372 SPATA31A1Q5TZJ5 1347 aa27.05■■□□□ 1.92
TNFRSF1A-212ENST00000539372 SBNO2Q9Y2G9 1366 aa27.05■■□□□ 1.92
TNFRSF1A-212ENST00000539372 ZBTB7CA1YPR0 619 aa27.04■■□□□ 1.92
TNFRSF1A-212ENST00000539372 BLMP54132 1417 aaPredicted RBP27.04■■□□□ 1.92
TNFRSF1A-212ENST00000539372 ZNF692Q9BU19 519 aaPredicted RBP27.03■■□□□ 1.92
TNFRSF1A-212ENST00000539372 CAMTA1Q9Y6Y1 1673 aa27.03■■□□□ 1.92
TNFRSF1A-212ENST00000539372 PIK3C2AO00443 1686 aa27.02■■□□□ 1.92
TNFRSF1A-212ENST00000539372 TTC21BQ7Z4L5 1316 aa27.02■■□□□ 1.92
TNFRSF1A-212ENST00000539372 USP35Q9P2H5 1018 aa27.02■■□□□ 1.92
TNFRSF1A-212ENST00000539372 AKAP12Q02952 1782 aa27.01■■□□□ 1.91
TNFRSF1A-212ENST00000539372 CPSF1Q10570 1443 aaKnown RBP27■■□□□ 1.91
TNFRSF1A-212ENST00000539372 LARP1Q6PKG0 1096 aaKnown RBP27■■□□□ 1.91
TNFRSF1A-212ENST00000539372 LMO7Q8WWI1 1683 aa27■■□□□ 1.91
TNFRSF1A-212ENST00000539372 SLIT3O75094 1523 aa27■■□□□ 1.91
TNFRSF1A-212ENST00000539372 KTN1Q86UP2 1357 aaKnown RBP26.99■■□□□ 1.91
TNFRSF1A-212ENST00000539372 THSD7AQ9UPZ6 1657 aa26.99■■□□□ 1.91
TNFRSF1A-212ENST00000539372 FAM182BQ5T319 152 aa26.99■■□□□ 1.91
TNFRSF1A-212ENST00000539372 SF3B2Q13435 895 aaKnown RBP26.98■■□□□ 1.91
TNFRSF1A-212ENST00000539372 TMC1Q8TDI8 760 aa26.98■■□□□ 1.91
TNFRSF1A-212ENST00000539372 DEFB132Q7Z7B7 95 aa26.97■■□□□ 1.91
TNFRSF1A-212ENST00000539372 TTC21AQ8NDW8 1320 aa26.95■■□□□ 1.91
TNFRSF1A-212ENST00000539372 SOX12O15370 315 aa26.95■■□□□ 1.9
TNFRSF1A-212ENST00000539372 COL5A2P05997 1499 aaPredicted RBP26.94■■□□□ 1.9
TNFRSF1A-212ENST00000539372 ST20-MTHFSA0A0A6YYL1 179 aa26.93■■□□□ 1.9
TNFRSF1A-212ENST00000539372 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.93■■□□□ 1.9
TNFRSF1A-212ENST00000539372 SLC12A5Q9H2X9 1139 aa26.93■■□□□ 1.9
TNFRSF1A-212ENST00000539372 BARGINQ6ZT62 677 aa26.92■■□□□ 1.9
TNFRSF1A-212ENST00000539372 TCP11L2Q8N4U5 519 aa26.92■■□□□ 1.9
TNFRSF1A-212ENST00000539372 PCGF6Q9BYE7 350 aa26.92■■□□□ 1.9
TNFRSF1A-212ENST00000539372 ZRANB1Q9UGI0 708 aa26.92■■□□□ 1.9
TNFRSF1A-212ENST00000539372 AATKQ6ZMQ8 1374 aa26.92■■□□□ 1.9
TNFRSF1A-212ENST00000539372 CD163L1Q9NR16 1453 aa26.92■■□□□ 1.9
TNFRSF1A-212ENST00000539372 TESK2Q96S53 571 aa26.91■■□□□ 1.9
TNFRSF1A-212ENST00000539372 MON2Q7Z3U7 1717 aa26.9■■□□□ 1.9
TNFRSF1A-212ENST00000539372 HDGFL2Q7Z4V5 671 aaPredicted RBP26.89■■□□□ 1.9
TNFRSF1A-212ENST00000539372 KCNH5Q8NCM2 988 aa26.89■■□□□ 1.9
TNFRSF1A-212ENST00000539372 ARHGEF25Q86VW2 580 aa26.87■■□□□ 1.89
TNFRSF1A-212ENST00000539372 NME9Q86XW9 330 aa26.87■■□□□ 1.89
TNFRSF1A-212ENST00000539372 AXIN2Q9Y2T1 843 aa26.87■■□□□ 1.89
TNFRSF1A-212ENST00000539372 CRB1P82279 1406 aa26.86■■□□□ 1.89
TNFRSF1A-212ENST00000539372 THRAP3Q9Y2W1 955 aaKnown RBP26.86■■□□□ 1.89
TNFRSF1A-212ENST00000539372 COL18A1P39060 1754 aa26.86■■□□□ 1.89
TNFRSF1A-212ENST00000539372 BAG6P46379 1132 aa26.85■■□□□ 1.89
TNFRSF1A-212ENST00000539372 PDE3BQ13370 1112 aa26.85■■□□□ 1.89
TNFRSF1A-212ENST00000539372 PUS7Q96PZ0 661 aaKnown RBP26.85■■□□□ 1.89
TNFRSF1A-212ENST00000539372 A0A1W2PP64 1363 aa26.84■■□□□ 1.89
TNFRSF1A-212ENST00000539372 TOM1L2Q6ZVM7 507 aa26.84■■□□□ 1.89
TNFRSF1A-212ENST00000539372 TERF2IPQ9NYB0 399 aa26.84■■□□□ 1.89
TNFRSF1A-212ENST00000539372 NFAT5O94916 1531 aa26.84■■□□□ 1.89
TNFRSF1A-212ENST00000539372 FAM196AQ6ZSG2 479 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms