RNA–Protein interactions for RNA: ENST00000538966.5

PLXNB3-209, Transcript of plexin B3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PLXNB3, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-209ENST00000538966 BRMS1Q9HCU9 246 aa17.01■□□□□ 0.31
PLXNB3-209ENST00000538966 OFD1O75665 1012 aa17.01■□□□□ 0.31
PLXNB3-209ENST00000538966 CYB5RLQ6IPT4 315 aa17.01■□□□□ 0.31
PLXNB3-209ENST00000538966 FAM177BA6PVY3 158 aa17■□□□□ 0.31
PLXNB3-209ENST00000538966 SURF6O75683 361 aaKnown RBP17■□□□□ 0.31
PLXNB3-209ENST00000538966 FIBPO43427 364 aa17■□□□□ 0.31
PLXNB3-209ENST00000538966 RAPGEF4Q8WZA2 1011 aa17■□□□□ 0.31
PLXNB3-209ENST00000538966 MTHFSP49914 203 aa17■□□□□ 0.31
PLXNB3-209ENST00000538966 CFTRP13569 1480 aa16.99■□□□□ 0.31
PLXNB3-209ENST00000538966 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.99■□□□□ 0.31
PLXNB3-209ENST00000538966 MRC2Q9UBG0 1479 aa16.99■□□□□ 0.31
PLXNB3-209ENST00000538966 IL27Q8NEV9 243 aa16.99■□□□□ 0.31
PLXNB3-209ENST00000538966 SYNJ1O43426 1573 aa16.99■□□□□ 0.31
PLXNB3-209ENST00000538966 EXOSC9Q06265 439 aaKnown RBP16.98■□□□□ 0.31
PLXNB3-209ENST00000538966 TCP11L2Q8N4U5 519 aa16.98■□□□□ 0.31
PLXNB3-209ENST00000538966 NLRP2Q9NX02 1062 aa16.98■□□□□ 0.31
PLXNB3-209ENST00000538966 WASHC2AQ641Q2 1341 aa16.98■□□□□ 0.31
PLXNB3-209ENST00000538966 MAP4K4O95819 1239 aaPredicted RBP16.97■□□□□ 0.31
PLXNB3-209ENST00000538966 NCOA2Q15596 1464 aa16.97■□□□□ 0.31
PLXNB3-209ENST00000538966 MAP7D2Q96T17 732 aa16.97■□□□□ 0.31
PLXNB3-209ENST00000538966 NOB1Q9ULX3 412 aaKnown RBP16.97■□□□□ 0.31
PLXNB3-209ENST00000538966 HMGXB3Q12766 1538 aa16.97■□□□□ 0.31
PLXNB3-209ENST00000538966 KINO60870 393 aaKnown RBP16.97■□□□□ 0.31
PLXNB3-209ENST00000538966 LETM1O95202 739 aaPredicted RBP16.97■□□□□ 0.31
PLXNB3-209ENST00000538966 STK3Q13188 491 aa16.97■□□□□ 0.31
PLXNB3-209ENST00000538966 STK11IPQ8N1F8 1099 aa16.97■□□□□ 0.31
PLXNB3-209ENST00000538966 XBP1P17861 261 aa16.96■□□□□ 0.31
PLXNB3-209ENST00000538966 CLASRPQ8N2M8 674 aaKnown RBP16.96■□□□□ 0.31
PLXNB3-209ENST00000538966 CC2D2AQ9P2K1 1620 aa16.96■□□□□ 0.31
PLXNB3-209ENST00000538966 H0YHG0 523 aa16.96■□□□□ 0.3
PLXNB3-209ENST00000538966 BCAR3O75815 825 aa16.96■□□□□ 0.3
PLXNB3-209ENST00000538966 IKQ13123 557 aaPredicted RBP16.95■□□□□ 0.3
PLXNB3-209ENST00000538966 TSR2Q969E8 191 aaKnown RBP16.95■□□□□ 0.3
PLXNB3-209ENST00000538966 PPP1R1BQ9UD71 204 aaPredicted RBP16.95■□□□□ 0.3
PLXNB3-209ENST00000538966 ARHGAP5Q13017 1502 aa16.95■□□□□ 0.3
PLXNB3-209ENST00000538966 EFCAB5A4FU69 1503 aa16.94■□□□□ 0.3
PLXNB3-209ENST00000538966 IFT140Q96RY7 1462 aa16.94■□□□□ 0.3
PLXNB3-209ENST00000538966 CCDC173Q0VFZ6 552 aa16.94■□□□□ 0.3
PLXNB3-209ENST00000538966 BRD4O60885 1362 aaPredicted RBP16.94■□□□□ 0.3
PLXNB3-209ENST00000538966 CCDC30Q5VVM6 783 aa16.93■□□□□ 0.3
PLXNB3-209ENST00000538966 PPP2R1AP30153 589 aa16.93■□□□□ 0.3
PLXNB3-209ENST00000538966 MBD3O95983 291 aa16.93■□□□□ 0.3
PLXNB3-209ENST00000538966 AAMPQ13685 434 aa16.93■□□□□ 0.3
PLXNB3-209ENST00000538966 PRKAR2BP31323 418 aa16.93■□□□□ 0.3
PLXNB3-209ENST00000538966 TOP2BQ02880 1626 aa16.93■□□□□ 0.3
PLXNB3-209ENST00000538966 AKNAQ7Z591 1439 aa16.92■□□□□ 0.3
PLXNB3-209ENST00000538966 NLRP6P59044 892 aa16.92■□□□□ 0.3
PLXNB3-209ENST00000538966 SYNJ2O15056 1496 aa16.92■□□□□ 0.3
PLXNB3-209ENST00000538966 MIA2Q96PC5 1412 aa16.92■□□□□ 0.3
PLXNB3-209ENST00000538966 GNAI3P08754 354 aa16.91■□□□□ 0.3
PLXNB3-209ENST00000538966 RABEP1Q15276 862 aa16.91■□□□□ 0.3
PLXNB3-209ENST00000538966 TWISTNBQ3B726 338 aaPredicted RBP16.91■□□□□ 0.3
PLXNB3-209ENST00000538966 ERCC4Q92889 916 aaPredicted RBP16.91■□□□□ 0.3
PLXNB3-209ENST00000538966 TBC1D2BQ9UPU7 963 aa16.91■□□□□ 0.3
PLXNB3-209ENST00000538966 STK38Q15208 465 aa16.91■□□□□ 0.3
PLXNB3-209ENST00000538966 SART3Q15020 963 aaKnown RBP16.91■□□□□ 0.3
PLXNB3-209ENST00000538966 MAGEC2Q9UBF1 373 aaPredicted RBP16.91■□□□□ 0.3
PLXNB3-209ENST00000538966 CWC15Q9P013 229 aaKnown RBP16.91■□□□□ 0.3
PLXNB3-209ENST00000538966 FILIP1LQ4L180 1135 aa16.9■□□□□ 0.3
PLXNB3-209ENST00000538966 SMARCE1Q969G3 411 aa16.9■□□□□ 0.3
PLXNB3-209ENST00000538966 AXDND1Q5T1B0 1012 aaPredicted RBP16.9■□□□□ 0.3
PLXNB3-209ENST00000538966 CDK5RAP3Q96JB5 506 aa16.9■□□□□ 0.3
PLXNB3-209ENST00000538966 SIL1Q9H173 461 aa16.9■□□□□ 0.3
PLXNB3-209ENST00000538966 ZNF396Q96N95 335 aaPredicted RBP16.89■□□□□ 0.3
PLXNB3-209ENST00000538966 SERPINC1P01008 464 aa16.89■□□□□ 0.29
PLXNB3-209ENST00000538966 TTC39AQ5SRH9 613 aa16.89■□□□□ 0.29
PLXNB3-209ENST00000538966 ANKRD50Q9ULJ7 1429 aa16.89■□□□□ 0.29
PLXNB3-209ENST00000538966 EHBP1L1Q8N3D4 1523 aa16.89■□□□□ 0.29
PLXNB3-209ENST00000538966 FAM69CQ0P6D2 419 aa16.89■□□□□ 0.29
PLXNB3-209ENST00000538966 GNAI2P04899 355 aa16.88■□□□□ 0.29
PLXNB3-209ENST00000538966 FAM177A1Q8N128 213 aaPredicted RBP16.88■□□□□ 0.29
PLXNB3-209ENST00000538966 MTERF4Q7Z6M4 381 aaKnown RBP16.88■□□□□ 0.29
PLXNB3-209ENST00000538966 NESP48681 1621 aa16.88■□□□□ 0.29
PLXNB3-209ENST00000538966 DCTN1Q14203 1278 aa16.88■□□□□ 0.29
PLXNB3-209ENST00000538966 TSPYL1Q9H0U9 437 aa16.88■□□□□ 0.29
PLXNB3-209ENST00000538966 SLC4A2P04920 1241 aa16.87■□□□□ 0.29
PLXNB3-209ENST00000538966 DHX37Q8IY37 1157 aaKnown RBP16.87■□□□□ 0.29
PLXNB3-209ENST00000538966 STAC3Q96MF2 364 aa16.87■□□□□ 0.29
PLXNB3-209ENST00000538966 GCC1Q96CN9 775 aa16.87■□□□□ 0.29
PLXNB3-209ENST00000538966 TOPBP1Q92547 1522 aa16.87■□□□□ 0.29
PLXNB3-209ENST00000538966 CFAP70Q5T0N1 1121 aa16.87■□□□□ 0.29
PLXNB3-209ENST00000538966 CCDC191Q8NCU4 936 aa16.87■□□□□ 0.29
PLXNB3-209ENST00000538966 RBM42Q9BTD8 480 aaKnown RBP16.87■□□□□ 0.29
PLXNB3-209ENST00000538966 TNMDQ9H2S6 317 aa16.87■□□□□ 0.29
PLXNB3-209ENST00000538966 ATF3P18847 181 aa16.87■□□□□ 0.29
PLXNB3-209ENST00000538966 PRG4Q92954 1404 aaPredicted RBP16.87■□□□□ 0.29
PLXNB3-209ENST00000538966 MCM2P49736 904 aa16.86■□□□□ 0.29
PLXNB3-209ENST00000538966 HECW1Q76N89 1606 aa16.86■□□□□ 0.29
PLXNB3-209ENST00000538966 KRT18P05783 430 aaKnown RBP16.86■□□□□ 0.29
PLXNB3-209ENST00000538966 PDCP20941 246 aa16.86■□□□□ 0.29
PLXNB3-209ENST00000538966 TMEM132AQ24JP5 1023 aa16.86■□□□□ 0.29
PLXNB3-209ENST00000538966 PLCD4Q9BRC7 762 aa16.86■□□□□ 0.29
PLXNB3-209ENST00000538966 RDXP35241 583 aaKnown RBP16.86■□□□□ 0.29
PLXNB3-209ENST00000538966 ABTB2Q8N961 1025 aa16.86■□□□□ 0.29
PLXNB3-209ENST00000538966 CYP46A1Q9Y6A2 500 aa16.86■□□□□ 0.29
PLXNB3-209ENST00000538966 HIP1O00291 1037 aa16.85■□□□□ 0.29
PLXNB3-209ENST00000538966 LEKR1Q6ZMV7 388 aa16.85■□□□□ 0.29
PLXNB3-209ENST00000538966 K7ELQ4 463 aaPredicted RBP16.85■□□□□ 0.29
PLXNB3-209ENST00000538966 GRPEL1Q9HAV7 217 aa16.85■□□□□ 0.29
PLXNB3-209ENST00000538966 CCP110O43303 1012 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms