RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 TOPAZ1Q8N9V7 1692 aa18.96■□□□□ 0.63
MRPS35-202ENST00000536569 PAK3O75914 559 aaPredicted RBP18.96■□□□□ 0.63
MRPS35-202ENST00000536569 COL14A1Q05707 1796 aaKnown RBP18.94■□□□□ 0.62
MRPS35-202ENST00000536569 NBPF8Q3BBV2 869 aa18.94■□□□□ 0.62
MRPS35-202ENST00000536569 ACEP12821 1306 aa18.94■□□□□ 0.62
MRPS35-202ENST00000536569 BRD4O60885 1362 aaPredicted RBP18.93■□□□□ 0.62
MRPS35-202ENST00000536569 PLEKHG5O94827 1062 aa18.93■□□□□ 0.62
MRPS35-202ENST00000536569 SIN3AQ96ST3 1273 aa18.93■□□□□ 0.62
MRPS35-202ENST00000536569 CRYBG1Q9Y4K1 1723 aa18.93■□□□□ 0.62
MRPS35-202ENST00000536569 SRPK2P78362 688 aaKnown RBP18.92■□□□□ 0.62
MRPS35-202ENST00000536569 BTG4Q9NY30 223 aa18.92■□□□□ 0.62
MRPS35-202ENST00000536569 SEPT12Q8IYM1 358 aa18.91■□□□□ 0.62
MRPS35-202ENST00000536569 CCDC9Q9Y3X0 531 aaKnown RBP18.91■□□□□ 0.62
MRPS35-202ENST00000536569 TRPM1Q7Z4N2 1603 aa18.9■□□□□ 0.62
MRPS35-202ENST00000536569 NRAPQ86VF7 1730 aa18.9■□□□□ 0.62
MRPS35-202ENST00000536569 NEUROD1Q13562 356 aa18.89■□□□□ 0.61
MRPS35-202ENST00000536569 PRDM11Q9NQV5 511 aa18.89■□□□□ 0.61
MRPS35-202ENST00000536569 PPIP5K1Q6PFW1 1433 aa18.89■□□□□ 0.61
MRPS35-202ENST00000536569 QRICH2Q9H0J4 1663 aa18.89■□□□□ 0.61
MRPS35-202ENST00000536569 ROCK2O75116 1388 aaKnown RBP18.88■□□□□ 0.61
MRPS35-202ENST00000536569 EP400Q96L91 3159 aa18.87■□□□□ 0.61
MRPS35-202ENST00000536569 BLMP54132 1417 aaPredicted RBP18.87■□□□□ 0.61
MRPS35-202ENST00000536569 EVC2Q86UK5 1308 aa18.87■□□□□ 0.61
MRPS35-202ENST00000536569 CABP2Q9NPB3 220 aa18.87■□□□□ 0.61
MRPS35-202ENST00000536569 KRT27Q7Z3Y8 459 aa18.86■□□□□ 0.61
MRPS35-202ENST00000536569 ABTB2Q8N961 1025 aa18.86■□□□□ 0.61
MRPS35-202ENST00000536569 PHRF1Q9P1Y6 1649 aaKnown RBP18.85■□□□□ 0.61
MRPS35-202ENST00000536569 KIAA0232Q92628 1395 aa18.85■□□□□ 0.61
MRPS35-202ENST00000536569 SPATA31A5Q5VU36 1347 aa18.85■□□□□ 0.61
MRPS35-202ENST00000536569 SPATA31A7Q8IWB4 1347 aa18.85■□□□□ 0.61
MRPS35-202ENST00000536569 BRWD3Q6RI45 1802 aa18.85■□□□□ 0.61
MRPS35-202ENST00000536569 USP19O94966 1318 aa18.84■□□□□ 0.61
MRPS35-202ENST00000536569 NLRP13Q86W25 1043 aa18.84■□□□□ 0.61
MRPS35-202ENST00000536569 CPDO75976 1380 aa18.83■□□□□ 0.61
MRPS35-202ENST00000536569 FAM98CQ17RN3 349 aaKnown RBP18.82■□□□□ 0.6
MRPS35-202ENST00000536569 NUTM2GQ5VZR2 741 aa18.82■□□□□ 0.6
MRPS35-202ENST00000536569 CABP1Q9NZU7 370 aa18.82■□□□□ 0.6
MRPS35-202ENST00000536569 ZC3H6P61129 1189 aaKnown RBP18.81■□□□□ 0.6
MRPS35-202ENST00000536569 SF3B2Q13435 895 aaKnown RBP18.81■□□□□ 0.6
MRPS35-202ENST00000536569 ZNF692Q9BU19 519 aaPredicted RBP18.81■□□□□ 0.6
MRPS35-202ENST00000536569 USP6P35125 1406 aa18.81■□□□□ 0.6
MRPS35-202ENST00000536569 SBNO2Q9Y2G9 1366 aa18.81■□□□□ 0.6
MRPS35-202ENST00000536569 ZRANB1Q9UGI0 708 aa18.8■□□□□ 0.6
MRPS35-202ENST00000536569 NRKQ7Z2Y5 1582 aa18.8■□□□□ 0.6
MRPS35-202ENST00000536569 SPATA31A1Q5TZJ5 1347 aa18.79■□□□□ 0.6
MRPS35-202ENST00000536569 A0A0G2JS52 829 aa18.79■□□□□ 0.6
MRPS35-202ENST00000536569 GCP02774 474 aa18.79■□□□□ 0.6
MRPS35-202ENST00000536569 MYT1Q01538 1121 aa18.79■□□□□ 0.6
MRPS35-202ENST00000536569 CHRNA2Q15822 529 aa18.79■□□□□ 0.6
MRPS35-202ENST00000536569 SSH2Q76I76 1423 aa18.78■□□□□ 0.6
MRPS35-202ENST00000536569 TONSLQ96HA7 1378 aa18.78■□□□□ 0.6
MRPS35-202ENST00000536569 THSD7AQ9UPZ6 1657 aa18.77■□□□□ 0.6
MRPS35-202ENST00000536569 TRIM26Q12899 539 aaPredicted RBP18.77■□□□□ 0.6
MRPS35-202ENST00000536569 EVA1CP58658 441 aa18.76■□□□□ 0.59
MRPS35-202ENST00000536569 BARGINQ6ZT62 677 aa18.76■□□□□ 0.59
MRPS35-202ENST00000536569 NLRP6P59044 892 aa18.75■□□□□ 0.59
MRPS35-202ENST00000536569 CARD11Q9BXL7 1154 aa18.75■□□□□ 0.59
MRPS35-202ENST00000536569 STRN4Q9NRL3 753 aa18.75■□□□□ 0.59
MRPS35-202ENST00000536569 LMO7Q8WWI1 1683 aa18.75■□□□□ 0.59
MRPS35-202ENST00000536569 CAMTA1Q9Y6Y1 1673 aa18.74■□□□□ 0.59
MRPS35-202ENST00000536569 THRAP3Q9Y2W1 955 aaKnown RBP18.74■□□□□ 0.59
MRPS35-202ENST00000536569 SLIT3O75094 1523 aa18.74■□□□□ 0.59
MRPS35-202ENST00000536569 TTC21AQ8NDW8 1320 aa18.74■□□□□ 0.59
MRPS35-202ENST00000536569 CPSF1Q10570 1443 aaKnown RBP18.73■□□□□ 0.59
MRPS35-202ENST00000536569 AATKQ6ZMQ8 1374 aa18.72■□□□□ 0.59
MRPS35-202ENST00000536569 BAG6P46379 1132 aa18.72■□□□□ 0.59
MRPS35-202ENST00000536569 TTC21BQ7Z4L5 1316 aa18.72■□□□□ 0.59
MRPS35-202ENST00000536569 DEFB132Q7Z7B7 95 aa18.71■□□□□ 0.59
MRPS35-202ENST00000536569 TCP11L2Q8N4U5 519 aa18.71■□□□□ 0.59
MRPS35-202ENST00000536569 PUS7Q96PZ0 661 aaKnown RBP18.71■□□□□ 0.59
MRPS35-202ENST00000536569 AKAP12Q02952 1782 aa18.7■□□□□ 0.58
MRPS35-202ENST00000536569 SLC24A1O60721 1099 aa18.7■□□□□ 0.58
MRPS35-202ENST00000536569 LARP1Q6PKG0 1096 aaKnown RBP18.7■□□□□ 0.58
MRPS35-202ENST00000536569 KCNH5Q8NCM2 988 aa18.7■□□□□ 0.58
MRPS35-202ENST00000536569 COL5A2P05997 1499 aaPredicted RBP18.7■□□□□ 0.58
MRPS35-202ENST00000536569 PIK3C2AO00443 1686 aa18.69■□□□□ 0.58
MRPS35-202ENST00000536569 FAM196AQ6ZSG2 479 aa18.69■□□□□ 0.58
MRPS35-202ENST00000536569 KTN1Q86UP2 1357 aaKnown RBP18.68■□□□□ 0.58
MRPS35-202ENST00000536569 DISP2A7MBM2 1401 aa18.68■□□□□ 0.58
MRPS35-202ENST00000536569 RGPD1P0DJD0 1748 aa18.68■□□□□ 0.58
MRPS35-202ENST00000536569 CRB1P82279 1406 aa18.67■□□□□ 0.58
MRPS35-202ENST00000536569 C11orf95C9JLR9 678 aaPredicted RBP18.67■□□□□ 0.58
MRPS35-202ENST00000536569 USP35Q9P2H5 1018 aa18.67■□□□□ 0.58
MRPS35-202ENST00000536569 PDE3BQ13370 1112 aa18.66■□□□□ 0.58
MRPS35-202ENST00000536569 ARHGEF25Q86VW2 580 aa18.65■□□□□ 0.58
MRPS35-202ENST00000536569 MON2Q7Z3U7 1717 aa18.63■□□□□ 0.57
MRPS35-202ENST00000536569 FAM182BQ5T319 152 aa18.63■□□□□ 0.57
MRPS35-202ENST00000536569 HDGFL2Q7Z4V5 671 aaPredicted RBP18.63■□□□□ 0.57
MRPS35-202ENST00000536569 USP31Q70CQ4 1352 aa18.63■□□□□ 0.57
MRPS35-202ENST00000536569 ABCC6O95255 1503 aa18.63■□□□□ 0.57
MRPS35-202ENST00000536569 COL18A1P39060 1754 aa18.63■□□□□ 0.57
MRPS35-202ENST00000536569 TERF2IPQ9NYB0 399 aa18.62■□□□□ 0.57
MRPS35-202ENST00000536569 NINLQ9Y2I6 1382 aa18.62■□□□□ 0.57
MRPS35-202ENST00000536569 PARP4Q9UKK3 1724 aaKnown RBP18.61■□□□□ 0.57
MRPS35-202ENST00000536569 CD163L1Q9NR16 1453 aa18.61■□□□□ 0.57
MRPS35-202ENST00000536569 PARD3Q8TEW0 1356 aa18.61■□□□□ 0.57
MRPS35-202ENST00000536569 WDR17Q8IZU2 1322 aa18.61■□□□□ 0.57
MRPS35-202ENST00000536569 ZBTB7CA1YPR0 619 aa18.61■□□□□ 0.57
MRPS35-202ENST00000536569 CDCA7Q9BWT1 371 aaPredicted RBP18.61■□□□□ 0.57
MRPS35-202ENST00000536569 TNS1Q9HBL0 1735 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms