RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 SNRPBP14678 240 aaKnown RBP9.89□□□□□ -0.83
TNFRSF1A-206ENST00000535038 PCDHB15Q9Y5E8 787 aa9.89□□□□□ -0.83
TNFRSF1A-206ENST00000535038 ZNF511Q8NB15 262 aa9.88□□□□□ -0.83
TNFRSF1A-206ENST00000535038 KIFC2Q96AC6 838 aa9.88□□□□□ -0.83
TNFRSF1A-206ENST00000535038 ZBTB3Q9H5J0 574 aa9.88□□□□□ -0.83
TNFRSF1A-206ENST00000535038 HRCP23327 699 aa9.87□□□□□ -0.83
TNFRSF1A-206ENST00000535038 CTHP32929 405 aa9.87□□□□□ -0.83
TNFRSF1A-206ENST00000535038 RIC3Q7Z5B4 369 aa9.87□□□□□ -0.83
TNFRSF1A-206ENST00000535038 CFAP99D6REC4 459 aa9.86□□□□□ -0.83
TNFRSF1A-206ENST00000535038 LYPD8Q6UX82 237 aa9.86□□□□□ -0.83
TNFRSF1A-206ENST00000535038 CAPN5O15484 640 aaPredicted RBP9.85□□□□□ -0.83
TNFRSF1A-206ENST00000535038 VARSP26640 1264 aaKnown RBP9.85□□□□□ -0.83
TNFRSF1A-206ENST00000535038 PDE4DQ08499 809 aa9.85□□□□□ -0.83
TNFRSF1A-206ENST00000535038 NFX1Q12986 1120 aaKnown RBP9.85□□□□□ -0.83
TNFRSF1A-206ENST00000535038 PRPF38BQ5VTL8 546 aaKnown RBP9.85□□□□□ -0.83
TNFRSF1A-206ENST00000535038 TLL2Q9Y6L7 1015 aa9.85□□□□□ -0.83
TNFRSF1A-206ENST00000535038 CSPP1Q1MSJ5 1256 aa9.84□□□□□ -0.83
TNFRSF1A-206ENST00000535038 PLEKHG3A1L390 1219 aa9.83□□□□□ -0.84
TNFRSF1A-206ENST00000535038 CABLES1Q8TDN4 633 aa9.83□□□□□ -0.84
TNFRSF1A-206ENST00000535038 BMP1P13497 986 aa9.82□□□□□ -0.84
TNFRSF1A-206ENST00000535038 MAP10Q9P2G4 905 aa9.82□□□□□ -0.84
TNFRSF1A-206ENST00000535038 RB1CC1Q8TDY2 1594 aa9.82□□□□□ -0.84
TNFRSF1A-206ENST00000535038 F12P00748 615 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF1A-206ENST00000535038 MYSM1Q5VVJ2 828 aa9.81□□□□□ -0.84
TNFRSF1A-206ENST00000535038 MPNDQ8N594 471 aa9.81□□□□□ -0.84
TNFRSF1A-206ENST00000535038 TERTO14746 1132 aaKnown RBP9.8□□□□□ -0.84
TNFRSF1A-206ENST00000535038 TRIM46Q7Z4K8 759 aa9.8□□□□□ -0.84
TNFRSF1A-206ENST00000535038 TSC1Q92574 1164 aa9.8□□□□□ -0.84
TNFRSF1A-206ENST00000535038 SLC24A3Q9HC58 644 aa9.8□□□□□ -0.84
TNFRSF1A-206ENST00000535038 LIMD1Q9UGP4 676 aa9.8□□□□□ -0.84
TNFRSF1A-206ENST00000535038 NUTM2BA6NNL0 878 aaPredicted RBP9.79□□□□□ -0.84
TNFRSF1A-206ENST00000535038 NUTM2EB1AL46 878 aaPredicted RBP9.79□□□□□ -0.84
TNFRSF1A-206ENST00000535038 NNTQ13423 1086 aa9.79□□□□□ -0.84
TNFRSF1A-206ENST00000535038 NUTM2DQ5VT03 806 aaPredicted RBP9.79□□□□□ -0.84
TNFRSF1A-206ENST00000535038 NUTM2AQ8IVF1 878 aaPredicted RBP9.79□□□□□ -0.84
TNFRSF1A-206ENST00000535038 FAM174AQ8TBP5 190 aa9.79□□□□□ -0.84
TNFRSF1A-206ENST00000535038 QPCTQ16769 361 aa9.78□□□□□ -0.84
TNFRSF1A-206ENST00000535038 TUSC1Q2TAM9 212 aa9.78□□□□□ -0.84
TNFRSF1A-206ENST00000535038 FOXJ1Q92949 421 aa9.78□□□□□ -0.84
TNFRSF1A-206ENST00000535038 PER1O15534 1290 aaPredicted RBP9.77□□□□□ -0.85
TNFRSF1A-206ENST00000535038 WIPF1O43516 503 aa9.76□□□□□ -0.85
TNFRSF1A-206ENST00000535038 AGERQ15109 404 aa9.76□□□□□ -0.85
TNFRSF1A-206ENST00000535038 LILRB3O75022 631 aa9.75□□□□□ -0.85
TNFRSF1A-206ENST00000535038 ADH1CP00326 375 aa9.75□□□□□ -0.85
TNFRSF1A-206ENST00000535038 CECR2Q9BXF3 1484 aa9.74□□□□□ -0.85
TNFRSF1A-206ENST00000535038 CLK2P49760 499 aaKnown RBP9.74□□□□□ -0.85
TNFRSF1A-206ENST00000535038 WDR4P57081 412 aaKnown RBP9.74□□□□□ -0.85
TNFRSF1A-206ENST00000535038 ARID5BQ14865 1188 aa9.74□□□□□ -0.85
TNFRSF1A-206ENST00000535038 BPHLQ86WA6 291 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1A-206ENST00000535038 HELBQ8NG08 1087 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1A-206ENST00000535038 CDK15Q96Q40 435 aa9.74□□□□□ -0.85
TNFRSF1A-206ENST00000535038 MROH2BQ7Z745 1585 aa9.73□□□□□ -0.85
TNFRSF1A-206ENST00000535038 TIMP2P16035 220 aa9.73□□□□□ -0.85
TNFRSF1A-206ENST00000535038 INSM1Q01101 510 aaPredicted RBP9.73□□□□□ -0.85
TNFRSF1A-206ENST00000535038 LCE2CQ5TA81 110 aa9.73□□□□□ -0.85
TNFRSF1A-206ENST00000535038 SLC16A10Q8TF71 515 aa9.73□□□□□ -0.85
TNFRSF1A-206ENST00000535038 ZFP42Q96MM3 310 aa9.73□□□□□ -0.85
TNFRSF1A-206ENST00000535038 NXF1Q9UBU9 619 aaKnown RBP9.73□□□□□ -0.85
TNFRSF1A-206ENST00000535038 MRPL14Q6P1L8 145 aaKnown RBP9.72□□□□□ -0.85
TNFRSF1A-206ENST00000535038 ARMC2Q8NEN0 867 aa9.72□□□□□ -0.85
TNFRSF1A-206ENST00000535038 RSPH6AQ9H0K4 717 aa9.72□□□□□ -0.85
TNFRSF1A-206ENST00000535038 SCARF1Q14162 830 aa9.71□□□□□ -0.86
TNFRSF1A-206ENST00000535038 C4orf48Q5BLP8 95 aa9.71□□□□□ -0.86
TNFRSF1A-206ENST00000535038 RTL5Q5HYW3 569 aaPredicted RBP9.71□□□□□ -0.86
TNFRSF1A-206ENST00000535038 NR5A1Q13285 461 aa9.7□□□□□ -0.86
TNFRSF1A-206ENST00000535038 NBPF14Q5TI25 921 aa9.7□□□□□ -0.86
TNFRSF1A-206ENST00000535038 KLF16Q9BXK1 252 aaPredicted RBP9.7□□□□□ -0.86
TNFRSF1A-206ENST00000535038 POLR3EQ9NVU0 708 aa9.7□□□□□ -0.86
TNFRSF1A-206ENST00000535038 EIF4G1Q04637 1599 aaKnown RBP9.69□□□□□ -0.86
TNFRSF1A-206ENST00000535038 NPAS3Q8IXF0 933 aa9.69□□□□□ -0.86
TNFRSF1A-206ENST00000535038 PURBQ96QR8 312 aaKnown RBP9.69□□□□□ -0.86
TNFRSF1A-206ENST00000535038 BAZ1AQ9NRL2 1556 aaPredicted RBP9.68□□□□□ -0.86
TNFRSF1A-206ENST00000535038 ZIC2O95409 532 aaPredicted RBP9.68□□□□□ -0.86
TNFRSF1A-206ENST00000535038 STK17AQ9UEE5 414 aa9.68□□□□□ -0.86
TNFRSF1A-206ENST00000535038 UNC13AQ9UPW8 1703 aa9.68□□□□□ -0.86
TNFRSF1A-206ENST00000535038 NR3C2P08235 984 aa9.67□□□□□ -0.86
TNFRSF1A-206ENST00000535038 SH3RF1Q7Z6J0 888 aa9.67□□□□□ -0.86
TNFRSF1A-206ENST00000535038 ZFAND3Q9H8U3 227 aa9.67□□□□□ -0.86
TNFRSF1A-206ENST00000535038 WIZO95785 1651 aa9.67□□□□□ -0.86
TNFRSF1A-206ENST00000535038 GRM5P41594 1212 aa9.66□□□□□ -0.86
TNFRSF1A-206ENST00000535038 ITPKCQ96DU7 683 aa9.66□□□□□ -0.86
TNFRSF1A-206ENST00000535038 C1QTNF2Q9BXJ5 285 aa9.66□□□□□ -0.86
TNFRSF1A-206ENST00000535038 MAGEB6P1A0A0J9YX57 407 aa9.65□□□□□ -0.86
TNFRSF1A-206ENST00000535038 SH3BP5LQ7L8J4 393 aa9.65□□□□□ -0.86
TNFRSF1A-206ENST00000535038 IRF7Q92985 503 aa9.65□□□□□ -0.86
TNFRSF1A-206ENST00000535038 FSHRP23945 695 aa9.64□□□□□ -0.87
TNFRSF1A-206ENST00000535038 VEGFBP49765 207 aa9.64□□□□□ -0.87
TNFRSF1A-206ENST00000535038 MAP4K5Q9Y4K4 846 aa9.64□□□□□ -0.87
TNFRSF1A-206ENST00000535038 H3BM21 787 aa9.63□□□□□ -0.87
TNFRSF1A-206ENST00000535038 VASH1Q7L8A9 365 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF1A-206ENST00000535038 GPKOWQ92917 476 aaPredicted RBP eCLIP9.63□□□□□ -0.87
TNFRSF1A-206ENST00000535038 GMPRP36959 345 aa9.62□□□□□ -0.87
TNFRSF1A-206ENST00000535038 CTDSPL2Q05D32 466 aa9.62□□□□□ -0.87
TNFRSF1A-206ENST00000535038 C6orf118Q5T5N4 469 aa9.62□□□□□ -0.87
TNFRSF1A-206ENST00000535038 TRMT44Q8IYL2 757 aaKnown RBP9.62□□□□□ -0.87
TNFRSF1A-206ENST00000535038 CARD14Q9BXL6 1004 aa9.62□□□□□ -0.87
TNFRSF1A-206ENST00000535038 SOBPA7XYQ1 873 aa9.61□□□□□ -0.87
TNFRSF1A-206ENST00000535038 UPP2O95045 317 aa9.61□□□□□ -0.87
TNFRSF1A-206ENST00000535038 SKIV2LQ15477 1246 aaKnown RBP9.6□□□□□ -0.87
TNFRSF1A-206ENST00000535038 MEIOBQ8N635 442 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 1190.6 ms