RNA–Protein interactions for RNA: ENST00000534763.1

CCS-209, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-209ENST00000534763 NGLY1Q96IV0 654 aa18.17■□□□□ 0.5
CCS-209ENST00000534763 AFF2P51816 1311 aa18.17■□□□□ 0.5
CCS-209ENST00000534763 USP6P35125 1406 aa18.16■□□□□ 0.5
CCS-209ENST00000534763 CPSF1Q10570 1443 aaKnown RBP18.16■□□□□ 0.5
CCS-209ENST00000534763 PAK3O75914 559 aaPredicted RBP18.16■□□□□ 0.5
CCS-209ENST00000534763 NINLQ9Y2I6 1382 aa18.16■□□□□ 0.5
CCS-209ENST00000534763 SSH2Q76I76 1423 aa18.15■□□□□ 0.5
CCS-209ENST00000534763 TMF1P82094 1093 aa18.14■□□□□ 0.49
CCS-209ENST00000534763 HAP1P54257 671 aaPredicted RBP18.13■□□□□ 0.49
CCS-209ENST00000534763 MARF1Q9Y4F3 1742 aaKnown RBP18.12■□□□□ 0.49
CCS-209ENST00000534763 CDCA8Q53HL2 280 aa18.12■□□□□ 0.49
CCS-209ENST00000534763 ABTB2Q8N961 1025 aa18.12■□□□□ 0.49
CCS-209ENST00000534763 CABLES1Q8TDN4 633 aa18.12■□□□□ 0.49
CCS-209ENST00000534763 USP21Q9UK80 565 aa18.11■□□□□ 0.49
CCS-209ENST00000534763 SLIT2O94813 1529 aa18.11■□□□□ 0.49
CCS-209ENST00000534763 ABCA3Q99758 1704 aa18.11■□□□□ 0.49
CCS-209ENST00000534763 USP19O94966 1318 aa18.1■□□□□ 0.49
CCS-209ENST00000534763 TTC21AQ8NDW8 1320 aa18.1■□□□□ 0.49
CCS-209ENST00000534763 NLRP13Q86W25 1043 aa18.1■□□□□ 0.49
CCS-209ENST00000534763 BCL9LQ86UU0 1499 aa18.09■□□□□ 0.49
CCS-209ENST00000534763 KTN1Q86UP2 1357 aaKnown RBP18.09■□□□□ 0.49
CCS-209ENST00000534763 QTRT2Q9H974 415 aaKnown RBP18.09■□□□□ 0.49
CCS-209ENST00000534763 TERF2IPQ9NYB0 399 aa18.09■□□□□ 0.49
CCS-209ENST00000534763 TRPC5Q9UL62 973 aaPredicted RBP18.09■□□□□ 0.49
CCS-209ENST00000534763 CRYBG1Q9Y4K1 1723 aa18.09■□□□□ 0.49
CCS-209ENST00000534763 CD163L1Q9NR16 1453 aa18.08■□□□□ 0.49
CCS-209ENST00000534763 CDK12Q9NYV4 1490 aaPredicted RBP18.08■□□□□ 0.49
CCS-209ENST00000534763 TTC21BQ7Z4L5 1316 aa18.08■□□□□ 0.49
CCS-209ENST00000534763 SOCS7O14512 581 aa18.08■□□□□ 0.48
CCS-209ENST00000534763 RXRBP28702 533 aa18.08■□□□□ 0.48
CCS-209ENST00000534763 EIF4G2P78344 907 aaKnown RBP eCLIP18.08■□□□□ 0.482e-6■■■■■ 26.9
CCS-209ENST00000534763 HDGFL2Q7Z4V5 671 aaPredicted RBP18.08■□□□□ 0.48
CCS-209ENST00000534763 AKAP12Q02952 1782 aa18.08■□□□□ 0.48
CCS-209ENST00000534763 RBM6P78332 1123 aaKnown RBP18.07■□□□□ 0.48
CCS-209ENST00000534763 UNC5CLQ8IV45 518 aa18.07■□□□□ 0.48
CCS-209ENST00000534763 TMC1Q8TDI8 760 aa18.07■□□□□ 0.48
CCS-209ENST00000534763 SLC12A5Q9H2X9 1139 aa18.07■□□□□ 0.48
CCS-209ENST00000534763 ATRNO75882 1429 aa18.06■□□□□ 0.48
CCS-209ENST00000534763 FAM83GA6ND36 823 aa18.06■□□□□ 0.48
CCS-209ENST00000534763 NRKQ7Z2Y5 1582 aa18.05■□□□□ 0.48
CCS-209ENST00000534763 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.05■□□□□ 0.48
CCS-209ENST00000534763 EDC4Q6P2E9 1401 aaKnown RBP18.05■□□□□ 0.48
CCS-209ENST00000534763 CPDO75976 1380 aa18.04■□□□□ 0.48
CCS-209ENST00000534763 MON2Q7Z3U7 1717 aa18.04■□□□□ 0.48
CCS-209ENST00000534763 NWD2Q9ULI1 1742 aa18.04■□□□□ 0.48
CCS-209ENST00000534763 NLRP6P59044 892 aa18.04■□□□□ 0.48
CCS-209ENST00000534763 PHRF1Q9P1Y6 1649 aaKnown RBP18.04■□□□□ 0.48
CCS-209ENST00000534763 A0A1W2PP64 1363 aa18.04■□□□□ 0.48
CCS-209ENST00000534763 GCP02774 474 aa18.03■□□□□ 0.48
CCS-209ENST00000534763 NUTM2GQ5VZR2 741 aa18.03■□□□□ 0.48
CCS-209ENST00000534763 COL14A1Q05707 1796 aaKnown RBP18.03■□□□□ 0.48
CCS-209ENST00000534763 ANKRD36BQ8N2N9 1353 aa18.03■□□□□ 0.48
CCS-209ENST00000534763 SLIT3O75094 1523 aa18.03■□□□□ 0.48
CCS-209ENST00000534763 PLEKHG5O94827 1062 aa18.02■□□□□ 0.48
CCS-209ENST00000534763 PRDM11Q9NQV5 511 aa18.02■□□□□ 0.48
CCS-209ENST00000534763 PIK3C2AO00443 1686 aa18.02■□□□□ 0.47
CCS-209ENST00000534763 USP31Q70CQ4 1352 aa18.02■□□□□ 0.47
CCS-209ENST00000534763 KIAA0232Q92628 1395 aa18.02■□□□□ 0.47
CCS-209ENST00000534763 HSPA5P11021 654 aaKnown RBP18.01■□□□□ 0.47
CCS-209ENST00000534763 VPS72Q15906 364 aa18.01■□□□□ 0.47
CCS-209ENST00000534763 KCNH5Q8NCM2 988 aa18■□□□□ 0.47
CCS-209ENST00000534763 GJD4Q96KN9 370 aaPredicted RBP18■□□□□ 0.47
CCS-209ENST00000534763 PLCH1Q4KWH8 1693 aa17.99■□□□□ 0.47
CCS-209ENST00000534763 BTG4Q9NY30 223 aa17.99■□□□□ 0.47
CCS-209ENST00000534763 ZC3H6P61129 1189 aaKnown RBP17.98■□□□□ 0.47
CCS-209ENST00000534763 USP54Q70EL1 1684 aa17.97■□□□□ 0.47
CCS-209ENST00000534763 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.96■□□□□ 0.47
CCS-209ENST00000534763 NRAPQ86VF7 1730 aa17.95■□□□□ 0.46
CCS-209ENST00000534763 AATKQ6ZMQ8 1374 aa17.95■□□□□ 0.46
CCS-209ENST00000534763 ONECUT3O60422 494 aaPredicted RBP17.95■□□□□ 0.46
CCS-209ENST00000534763 RGS12O14924 1447 aa17.95■□□□□ 0.46
CCS-209ENST00000534763 NME9Q86XW9 330 aa17.94■□□□□ 0.46
CCS-209ENST00000534763 LMO7Q8WWI1 1683 aa17.93■□□□□ 0.46
CCS-209ENST00000534763 OVOS2A0A0J9YW53 1432 aa17.93■□□□□ 0.46
CCS-209ENST00000534763 OVOS2Q6IE36 1432 aa17.93■□□□□ 0.46
CCS-209ENST00000534763 CHRNA2Q15822 529 aa17.93■□□□□ 0.46
CCS-209ENST00000534763 ARHGEF25Q86VW2 580 aa17.93■□□□□ 0.46
CCS-209ENST00000534763 NFAT5O94916 1531 aa17.93■□□□□ 0.46
CCS-209ENST00000534763 GLI3P10071 1580 aa17.92■□□□□ 0.46
CCS-209ENST00000534763 SPATA31A5Q5VU36 1347 aa17.92■□□□□ 0.46
CCS-209ENST00000534763 SPATA31A7Q8IWB4 1347 aa17.92■□□□□ 0.46
CCS-209ENST00000534763 ABCC6O95255 1503 aa17.92■□□□□ 0.46
CCS-209ENST00000534763 MYOM1P52179 1685 aa17.91■□□□□ 0.46
CCS-209ENST00000534763 CAMTA1Q9Y6Y1 1673 aa17.91■□□□□ 0.46
CCS-209ENST00000534763 ZRANB1Q9UGI0 708 aa17.9■□□□□ 0.46
CCS-209ENST00000534763 EVA1CP58658 441 aa17.89■□□□□ 0.45
CCS-209ENST00000534763 COG3Q96JB2 828 aa17.89■□□□□ 0.45
CCS-209ENST00000534763 CCDC9Q9Y3X0 531 aaKnown RBP17.89■□□□□ 0.45
CCS-209ENST00000534763 COL5A2P05997 1499 aaPredicted RBP17.88■□□□□ 0.45
CCS-209ENST00000534763 FYB1O15117 783 aa17.88■□□□□ 0.45
CCS-209ENST00000534763 CARD14Q9BXL6 1004 aa17.88■□□□□ 0.45
CCS-209ENST00000534763 SPATA31A1Q5TZJ5 1347 aa17.88■□□□□ 0.45
CCS-209ENST00000534763 C11orf95C9JLR9 678 aaPredicted RBP17.86■□□□□ 0.45
CCS-209ENST00000534763 STRN4Q9NRL3 753 aa17.86■□□□□ 0.45
CCS-209ENST00000534763 THRAP3Q9Y2W1 955 aaKnown RBP17.86■□□□□ 0.45
CCS-209ENST00000534763 COL18A1P39060 1754 aa17.86■□□□□ 0.45
CCS-209ENST00000534763 BARGINQ6ZT62 677 aa17.85■□□□□ 0.45
CCS-209ENST00000534763 SEPT12Q8IYM1 358 aa17.85■□□□□ 0.45
CCS-209ENST00000534763 AXIN2Q9Y2T1 843 aa17.85■□□□□ 0.45
CCS-209ENST00000534763 CRB1P82279 1406 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 194 ms