RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 EP400Q96L91 3159 aa19.16■□□□□ 0.66
COPB1-209ENST00000533096 KIF1AQ12756 1690 aa19.15■□□□□ 0.66
COPB1-209ENST00000533096 APBA3O96018 575 aa19.14■□□□□ 0.65
COPB1-209ENST00000533096 NUDT16Q96DE0 195 aaKnown RBP19.13■□□□□ 0.65
COPB1-209ENST00000533096 ANKARQ7Z5J8 1434 aa19.13■□□□□ 0.65
COPB1-209ENST00000533096 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.12■□□□□ 0.65
COPB1-209ENST00000533096 BRWD3Q6RI45 1802 aa19.11■□□□□ 0.65
COPB1-209ENST00000533096 PDE3BQ13370 1112 aa19.11■□□□□ 0.65
COPB1-209ENST00000533096 FAM196AQ6ZSG2 479 aa19.11■□□□□ 0.65
COPB1-209ENST00000533096 KIAA0232Q92628 1395 aa19.1■□□□□ 0.65
COPB1-209ENST00000533096 CDK19Q9BWU1 502 aa19.1■□□□□ 0.65
COPB1-209ENST00000533096 RGPD8O14715 1765 aaPredicted RBP19.09■□□□□ 0.65
COPB1-209ENST00000533096 KNDC1Q76NI1 1749 aa19.09■□□□□ 0.65
COPB1-209ENST00000533096 SPATA31A1Q5TZJ5 1347 aa19.09■□□□□ 0.65
COPB1-209ENST00000533096 CAMKK2Q96RR4 588 aa19.09■□□□□ 0.65
COPB1-209ENST00000533096 EIF3AQ14152 1382 aaKnown RBP19.07■□□□□ 0.64
COPB1-209ENST00000533096 ZBTB7CA1YPR0 619 aa19.07■□□□□ 0.64
COPB1-209ENST00000533096 NBPF8Q3BBV2 869 aa19.06■□□□□ 0.64
COPB1-209ENST00000533096 ABTB2Q8N961 1025 aa19.06■□□□□ 0.64
COPB1-209ENST00000533096 IFT172Q9UG01 1749 aa19.05■□□□□ 0.64
COPB1-209ENST00000533096 PLCH1Q4KWH8 1693 aa19.05■□□□□ 0.64
COPB1-209ENST00000533096 RAB3GAP2Q9H2M9 1393 aa19.05■□□□□ 0.64
COPB1-209ENST00000533096 ACEP12821 1306 aa19.04■□□□□ 0.64
COPB1-209ENST00000533096 NBPF14Q5TI25 921 aa19.04■□□□□ 0.64
COPB1-209ENST00000533096 LARP1Q6PKG0 1096 aaKnown RBP19.04■□□□□ 0.64
COPB1-209ENST00000533096 DLC1Q96QB1 1528 aa19.04■□□□□ 0.64
COPB1-209ENST00000533096 CCDC61Q9Y6R9 512 aa19.02■□□□□ 0.64
COPB1-209ENST00000533096 NWD2Q9ULI1 1742 aa19.02■□□□□ 0.63
COPB1-209ENST00000533096 TCP11L2Q8N4U5 519 aa19■□□□□ 0.63
COPB1-209ENST00000533096 STAC3Q96MF2 364 aa19■□□□□ 0.63
COPB1-209ENST00000533096 ADGRB1O14514 1584 aa18.99■□□□□ 0.63
COPB1-209ENST00000533096 BARGINQ6ZT62 677 aa18.99■□□□□ 0.63
COPB1-209ENST00000533096 PPP1R1BQ9UD71 204 aaPredicted RBP18.99■□□□□ 0.63
COPB1-209ENST00000533096 TULP4Q9NRJ4 1543 aa18.99■□□□□ 0.63
COPB1-209ENST00000533096 COL14A1Q05707 1796 aaKnown RBP18.98■□□□□ 0.63
COPB1-209ENST00000533096 SRPK2P78362 688 aaKnown RBP18.98■□□□□ 0.63
COPB1-209ENST00000533096 NLRP13Q86W25 1043 aa18.97■□□□□ 0.63
COPB1-209ENST00000533096 PLEKHG3A1L390 1219 aa18.96■□□□□ 0.63
COPB1-209ENST00000533096 GCP02774 474 aa18.96■□□□□ 0.63
COPB1-209ENST00000533096 YY1P25490 414 aa18.96■□□□□ 0.63
COPB1-209ENST00000533096 NBPF1Q3BBV0 1214 aa18.95■□□□□ 0.62
COPB1-209ENST00000533096 CABP2Q9NPB3 220 aa18.95■□□□□ 0.62
COPB1-209ENST00000533096 LRP5O75197 1615 aa18.95■□□□□ 0.62
COPB1-209ENST00000533096 NRAPQ86VF7 1730 aa18.94■□□□□ 0.62
COPB1-209ENST00000533096 ABCA3Q99758 1704 aa18.94■□□□□ 0.62
COPB1-209ENST00000533096 TRPM3Q9HCF6 1732 aaPredicted RBP18.94■□□□□ 0.62
COPB1-209ENST00000533096 DCAF8L1A6NGE4 600 aa18.94■□□□□ 0.62
COPB1-209ENST00000533096 ADGRB2O60241 1585 aa18.93■□□□□ 0.62
COPB1-209ENST00000533096 DISP2A7MBM2 1401 aa18.93■□□□□ 0.62
COPB1-209ENST00000533096 SSH2Q76I76 1423 aa18.93■□□□□ 0.62
COPB1-209ENST00000533096 SPON1Q9HCB6 807 aa18.93■□□□□ 0.62
COPB1-209ENST00000533096 NLRP6P59044 892 aa18.92■□□□□ 0.62
COPB1-209ENST00000533096 ALS2Q96Q42 1657 aa18.92■□□□□ 0.62
COPB1-209ENST00000533096 KCNQ2O43526 872 aa18.91■□□□□ 0.62
COPB1-209ENST00000533096 CABP1Q9NZU7 370 aa18.91■□□□□ 0.62
COPB1-209ENST00000533096 THRAP3Q9Y2W1 955 aaKnown RBP18.91■□□□□ 0.62
COPB1-209ENST00000533096 TOM1L2Q6ZVM7 507 aa18.9■□□□□ 0.62
COPB1-209ENST00000533096 POLR3AO14802 1390 aaPredicted RBP18.9■□□□□ 0.62
COPB1-209ENST00000533096 PARD3Q8TEW0 1356 aa18.9■□□□□ 0.62
COPB1-209ENST00000533096 ATP7BP35670 1465 aa18.9■□□□□ 0.62
COPB1-209ENST00000533096 DDB1Q16531 1140 aa18.88■□□□□ 0.61
COPB1-209ENST00000533096 THSD7AQ9UPZ6 1657 aa18.88■□□□□ 0.61
COPB1-209ENST00000533096 SOX12O15370 315 aa18.87■□□□□ 0.61
COPB1-209ENST00000533096 RGPD1P0DJD0 1748 aa18.87■□□□□ 0.61
COPB1-209ENST00000533096 PTF1AQ7RTS3 328 aa18.87■□□□□ 0.61
COPB1-209ENST00000533096 CAMTA1Q9Y6Y1 1673 aa18.87■□□□□ 0.61
COPB1-209ENST00000533096 BCL11BQ9C0K0 894 aaPredicted RBP18.86■□□□□ 0.61
COPB1-209ENST00000533096 CPDO75976 1380 aa18.85■□□□□ 0.61
COPB1-209ENST00000533096 USP19O94966 1318 aa18.85■□□□□ 0.61
COPB1-209ENST00000533096 PPIP5K1Q6PFW1 1433 aa18.84■□□□□ 0.61
COPB1-209ENST00000533096 CENPJQ9HC77 1338 aaPredicted RBP18.84■□□□□ 0.61
COPB1-209ENST00000533096 CSB-PGBD3P0DP91 1061 aa18.84■□□□□ 0.61
COPB1-209ENST00000533096 C11orf95C9JLR9 678 aaPredicted RBP18.83■□□□□ 0.6
COPB1-209ENST00000533096 ZBTB7AO95365 584 aa18.83■□□□□ 0.6
COPB1-209ENST00000533096 ATF5Q9Y2D1 282 aaPredicted RBP18.83■□□□□ 0.6
COPB1-209ENST00000533096 AXIN2Q9Y2T1 843 aa18.83■□□□□ 0.6
COPB1-209ENST00000533096 PDGFDQ9GZP0 370 aaPredicted RBP18.82■□□□□ 0.6
COPB1-209ENST00000533096 PLSCR1O15162 318 aa18.81■□□□□ 0.6
COPB1-209ENST00000533096 PROM2Q8N271 834 aa18.8■□□□□ 0.6
COPB1-209ENST00000533096 MARCH10Q8NA82 808 aaPredicted RBP18.8■□□□□ 0.6
COPB1-209ENST00000533096 ANO8Q9HCE9 1232 aaPredicted RBP18.8■□□□□ 0.6
COPB1-209ENST00000533096 CRB1P82279 1406 aa18.8■□□□□ 0.6
COPB1-209ENST00000533096 TNS1Q9HBL0 1735 aaKnown RBP18.79■□□□□ 0.6
COPB1-209ENST00000533096 AATKQ6ZMQ8 1374 aa18.78■□□□□ 0.6
COPB1-209ENST00000533096 COL5A2P05997 1499 aaPredicted RBP18.77■□□□□ 0.6
COPB1-209ENST00000533096 EXOC5O00471 708 aa18.77■□□□□ 0.6
COPB1-209ENST00000533096 CRYBG1Q9Y4K1 1723 aa18.77■□□□□ 0.59
COPB1-209ENST00000533096 STK32BQ9NY57 414 aa18.76■□□□□ 0.59
COPB1-209ENST00000533096 OVOS2A0A0G2JMS6 1433 aa18.75■□□□□ 0.59
COPB1-209ENST00000533096 OVOS2A0A0J9YW53 1432 aa18.75■□□□□ 0.59
COPB1-209ENST00000533096 OVOS2Q6IE36 1432 aa18.75■□□□□ 0.59
COPB1-209ENST00000533096 PHRF1Q9P1Y6 1649 aaKnown RBP18.75■□□□□ 0.59
COPB1-209ENST00000533096 TXNRD1Q16881 649 aa18.75■□□□□ 0.59
COPB1-209ENST00000533096 WDR17Q8IZU2 1322 aa18.74■□□□□ 0.59
COPB1-209ENST00000533096 ARHGEF25Q86VW2 580 aa18.74■□□□□ 0.59
COPB1-209ENST00000533096 CDCA7Q9BWT1 371 aaPredicted RBP18.74■□□□□ 0.59
COPB1-209ENST00000533096 EVC2Q86UK5 1308 aa18.74■□□□□ 0.59
COPB1-209ENST00000533096 KCNH5Q8NCM2 988 aa18.73■□□□□ 0.59
COPB1-209ENST00000533096 ZNF692Q9BU19 519 aaPredicted RBP18.73■□□□□ 0.59
COPB1-209ENST00000533096 TTC21BQ7Z4L5 1316 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms