RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 CABLES1Q8TDN4 633 aa18.34■□□□□ 0.53
TRAPPC4-212ENST00000533058 QRICH2Q9H0J4 1663 aa18.34■□□□□ 0.53
TRAPPC4-212ENST00000533058 SLIT2O94813 1529 aa18.33■□□□□ 0.53
TRAPPC4-212ENST00000533058 ATRNO75882 1429 aa18.33■□□□□ 0.53
TRAPPC4-212ENST00000533058 ALS2Q96Q42 1657 aa18.33■□□□□ 0.52
TRAPPC4-212ENST00000533058 PPIP5K1Q6PFW1 1433 aa18.32■□□□□ 0.52
TRAPPC4-212ENST00000533058 MARF1Q9Y4F3 1742 aaKnown RBP18.32■□□□□ 0.52
TRAPPC4-212ENST00000533058 PAK3O75914 559 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC4-212ENST00000533058 UNC5CLQ8IV45 518 aa18.31■□□□□ 0.52
TRAPPC4-212ENST00000533058 CABP1Q9NZU7 370 aa18.3■□□□□ 0.52
TRAPPC4-212ENST00000533058 SLC24A1O60721 1099 aa18.29■□□□□ 0.52
TRAPPC4-212ENST00000533058 ATAD2Q6PL18 1390 aa18.29■□□□□ 0.52
TRAPPC4-212ENST00000533058 FAM83GA6ND36 823 aa18.28■□□□□ 0.52
TRAPPC4-212ENST00000533058 GJD4Q96KN9 370 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC4-212ENST00000533058 PUS7Q96PZ0 661 aaKnown RBP18.28■□□□□ 0.52
TRAPPC4-212ENST00000533058 ZNF692Q9BU19 519 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC4-212ENST00000533058 RGS12O14924 1447 aa18.26■□□□□ 0.51
TRAPPC4-212ENST00000533058 ABCA3Q99758 1704 aa18.26■□□□□ 0.51
TRAPPC4-212ENST00000533058 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.26■□□□□ 0.51
TRAPPC4-212ENST00000533058 USP6P35125 1406 aa18.25■□□□□ 0.51
TRAPPC4-212ENST00000533058 VPS72Q15906 364 aa18.25■□□□□ 0.51
TRAPPC4-212ENST00000533058 ABTB2Q8N961 1025 aa18.25■□□□□ 0.51
TRAPPC4-212ENST00000533058 SSH2Q76I76 1423 aa18.24■□□□□ 0.51
TRAPPC4-212ENST00000533058 NLRP13Q86W25 1043 aa18.24■□□□□ 0.51
TRAPPC4-212ENST00000533058 PLEKHG5O94827 1062 aa18.23■□□□□ 0.51
TRAPPC4-212ENST00000533058 USP19O94966 1318 aa18.23■□□□□ 0.51
TRAPPC4-212ENST00000533058 TESK2Q96S53 571 aa18.22■□□□□ 0.51
TRAPPC4-212ENST00000533058 NWD2Q9ULI1 1742 aa18.22■□□□□ 0.51
TRAPPC4-212ENST00000533058 CRYBG1Q9Y4K1 1723 aa18.22■□□□□ 0.51
TRAPPC4-212ENST00000533058 CPSF1Q10570 1443 aaKnown RBP18.22■□□□□ 0.51
TRAPPC4-212ENST00000533058 ST20-MTHFSA0A0A6YYL1 179 aa18.21■□□□□ 0.51
TRAPPC4-212ENST00000533058 ONECUT3O60422 494 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC4-212ENST00000533058 PRDM11Q9NQV5 511 aa18.21■□□□□ 0.51
TRAPPC4-212ENST00000533058 UPF1Q92900 1129 aaKnown RBP eCLIP18.2■□□□□ 0.5
TRAPPC4-212ENST00000533058 BTG4Q9NY30 223 aa18.2■□□□□ 0.5
TRAPPC4-212ENST00000533058 COL14A1Q05707 1796 aaKnown RBP18.19■□□□□ 0.5
TRAPPC4-212ENST00000533058 CPDO75976 1380 aa18.19■□□□□ 0.5
TRAPPC4-212ENST00000533058 NUTM2GQ5VZR2 741 aa18.19■□□□□ 0.5
TRAPPC4-212ENST00000533058 TTC21AQ8NDW8 1320 aa18.19■□□□□ 0.5
TRAPPC4-212ENST00000533058 KIAA0232Q92628 1395 aa18.18■□□□□ 0.5
TRAPPC4-212ENST00000533058 GCP02774 474 aa18.18■□□□□ 0.5
TRAPPC4-212ENST00000533058 PLCH1Q4KWH8 1693 aa18.18■□□□□ 0.5
TRAPPC4-212ENST00000533058 TTC21BQ7Z4L5 1316 aa18.18■□□□□ 0.5
TRAPPC4-212ENST00000533058 GLI3P10071 1580 aa18.17■□□□□ 0.5
TRAPPC4-212ENST00000533058 NLRP6P59044 892 aa18.16■□□□□ 0.5
TRAPPC4-212ENST00000533058 ZC3H6P61129 1189 aaKnown RBP18.16■□□□□ 0.5
TRAPPC4-212ENST00000533058 PHRF1Q9P1Y6 1649 aaKnown RBP18.16■□□□□ 0.5
TRAPPC4-212ENST00000533058 KTN1Q86UP2 1357 aaKnown RBP18.15■□□□□ 0.5
TRAPPC4-212ENST00000533058 USP47Q96K76 1375 aa18.15■□□□□ 0.5
TRAPPC4-212ENST00000533058 NINLQ9Y2I6 1382 aa18.15■□□□□ 0.5
TRAPPC4-212ENST00000533058 CD163L1Q9NR16 1453 aa18.14■□□□□ 0.49
TRAPPC4-212ENST00000533058 NRKQ7Z2Y5 1582 aa18.13■□□□□ 0.49
TRAPPC4-212ENST00000533058 NRAPQ86VF7 1730 aa18.13■□□□□ 0.49
TRAPPC4-212ENST00000533058 SLC12A5Q9H2X9 1139 aa18.13■□□□□ 0.49
TRAPPC4-212ENST00000533058 TERF2IPQ9NYB0 399 aa18.13■□□□□ 0.49
TRAPPC4-212ENST00000533058 CCDC9Q9Y3X0 531 aaKnown RBP18.13■□□□□ 0.49
TRAPPC4-212ENST00000533058 SPATA31A5Q5VU36 1347 aa18.13■□□□□ 0.49
TRAPPC4-212ENST00000533058 SPATA31A7Q8IWB4 1347 aa18.13■□□□□ 0.49
TRAPPC4-212ENST00000533058 SLIT3O75094 1523 aa18.13■□□□□ 0.49
TRAPPC4-212ENST00000533058 CHRNA2Q15822 529 aa18.12■□□□□ 0.49
TRAPPC4-212ENST00000533058 HDGFL2Q7Z4V5 671 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC4-212ENST00000533058 SEPT12Q8IYM1 358 aa18.12■□□□□ 0.49
TRAPPC4-212ENST00000533058 TMC1Q8TDI8 760 aa18.12■□□□□ 0.49
TRAPPC4-212ENST00000533058 AKAP12Q02952 1782 aa18.12■□□□□ 0.49
TRAPPC4-212ENST00000533058 ZEB1P37275 1124 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC4-212ENST00000533058 TMF1P82094 1093 aa18.11■□□□□ 0.49
TRAPPC4-212ENST00000533058 KCNH5Q8NCM2 988 aa18.11■□□□□ 0.49
TRAPPC4-212ENST00000533058 USP31Q70CQ4 1352 aa18.11■□□□□ 0.49
TRAPPC4-212ENST00000533058 AATKQ6ZMQ8 1374 aa18.09■□□□□ 0.49
TRAPPC4-212ENST00000533058 SPATA31A1Q5TZJ5 1347 aa18.09■□□□□ 0.49
TRAPPC4-212ENST00000533058 CDCA8Q53HL2 280 aa18.09■□□□□ 0.49
TRAPPC4-212ENST00000533058 CCDC125Q86Z20 511 aa18.09■□□□□ 0.49
TRAPPC4-212ENST00000533058 PIK3C2AO00443 1686 aa18.09■□□□□ 0.49
TRAPPC4-212ENST00000533058 EDC4Q6P2E9 1401 aaKnown RBP18.08■□□□□ 0.49
TRAPPC4-212ENST00000533058 CAMTA1Q9Y6Y1 1673 aa18.08■□□□□ 0.48
TRAPPC4-212ENST00000533058 A0A1W2PP64 1363 aa18.07■□□□□ 0.48
TRAPPC4-212ENST00000533058 MON2Q7Z3U7 1717 aa18.07■□□□□ 0.48
TRAPPC4-212ENST00000533058 LMO7Q8WWI1 1683 aa18.07■□□□□ 0.48
TRAPPC4-212ENST00000533058 EVA1CP58658 441 aa18.07■□□□□ 0.48
TRAPPC4-212ENST00000533058 ARHGEF25Q86VW2 580 aa18.07■□□□□ 0.48
TRAPPC4-212ENST00000533058 EIF4G2P78344 907 aaKnown RBP eCLIP18.06■□□□□ 0.48
TRAPPC4-212ENST00000533058 FAM98CQ17RN3 349 aaKnown RBP18.06■□□□□ 0.48
TRAPPC4-212ENST00000533058 KRT27Q7Z3Y8 459 aa18.06■□□□□ 0.48
TRAPPC4-212ENST00000533058 STRN4Q9NRL3 753 aa18.06■□□□□ 0.48
TRAPPC4-212ENST00000533058 BARGINQ6ZT62 677 aa18.05■□□□□ 0.48
TRAPPC4-212ENST00000533058 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.05■□□□□ 0.48
TRAPPC4-212ENST00000533058 THRAP3Q9Y2W1 955 aaKnown RBP18.04■□□□□ 0.48
TRAPPC4-212ENST00000533058 ANKRD36BQ8N2N9 1353 aa18.04■□□□□ 0.48
TRAPPC4-212ENST00000533058 COL5A2P05997 1499 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC4-212ENST00000533058 LARP1Q6PKG0 1096 aaKnown RBP18.03■□□□□ 0.48
TRAPPC4-212ENST00000533058 NME9Q86XW9 330 aa18.03■□□□□ 0.48
TRAPPC4-212ENST00000533058 HSPA5P11021 654 aaKnown RBP18.02■□□□□ 0.48
TRAPPC4-212ENST00000533058 USP54Q70EL1 1684 aa18.02■□□□□ 0.47
TRAPPC4-212ENST00000533058 TCP11L2Q8N4U5 519 aa18.01■□□□□ 0.47
TRAPPC4-212ENST00000533058 NFAT5O94916 1531 aa18.01■□□□□ 0.47
TRAPPC4-212ENST00000533058 THSD7AQ9UPZ6 1657 aa18■□□□□ 0.47
TRAPPC4-212ENST00000533058 A0A0G2JS52 829 aa18■□□□□ 0.47
TRAPPC4-212ENST00000533058 MYT1Q01538 1121 aa18■□□□□ 0.47
TRAPPC4-212ENST00000533058 ZRANB1Q9UGI0 708 aa18■□□□□ 0.47
TRAPPC4-212ENST00000533058 AXIN2Q9Y2T1 843 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms