RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 PRXQ9BXM0 1461 aa9.75□□□□□ -0.85
CTNND1-234ENST00000532844 PCMTD1Q96MG8 357 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-234ENST00000532844 INCENPQ9NQS7 918 aa9.75□□□□□ -0.85
CTNND1-234ENST00000532844 USP8P40818 1118 aa9.75□□□□□ -0.85
CTNND1-234ENST00000532844 CNTROBQ8N137 903 aa9.75□□□□□ -0.85
CTNND1-234ENST00000532844 TAF3Q5VWG9 929 aa9.74□□□□□ -0.85
CTNND1-234ENST00000532844 HOOK1Q9UJC3 728 aaKnown RBP9.74□□□□□ -0.85
CTNND1-234ENST00000532844 SMG6Q86US8 1419 aaKnown RBP9.74□□□□□ -0.85
CTNND1-234ENST00000532844 ERBINQ96RT1 1412 aa9.74□□□□□ -0.85
CTNND1-234ENST00000532844 VPS37DQ86XT2 251 aa9.74□□□□□ -0.85
CTNND1-234ENST00000532844 IL27Q8NEV9 243 aa9.74□□□□□ -0.85
CTNND1-234ENST00000532844 NEUROD6Q96NK8 337 aa9.74□□□□□ -0.85
CTNND1-234ENST00000532844 DAPK1P53355 1430 aa9.74□□□□□ -0.85
CTNND1-234ENST00000532844 RAPGEF4Q8WZA2 1011 aa9.74□□□□□ -0.85
CTNND1-234ENST00000532844 TSR2Q969E8 191 aaKnown RBP9.74□□□□□ -0.85
CTNND1-234ENST00000532844 PRG4Q92954 1404 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-234ENST00000532844 ERICH2A1L162 156 aa9.74□□□□□ -0.85
CTNND1-234ENST00000532844 CCDC30Q5VVM6 783 aa9.73□□□□□ -0.85
CTNND1-234ENST00000532844 CCDC43Q96MW1 224 aaKnown RBP9.73□□□□□ -0.85
CTNND1-234ENST00000532844 GOLGA6L7A0A1B0GV03 622 aa9.73□□□□□ -0.85
CTNND1-234ENST00000532844 MRE11P49959 708 aa9.73□□□□□ -0.85
CTNND1-234ENST00000532844 NASPP49321 788 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-234ENST00000532844 PDE3AQ14432 1141 aa9.73□□□□□ -0.85
CTNND1-234ENST00000532844 TWISTNBQ3B726 338 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-234ENST00000532844 CCDC73Q6ZRK6 1079 aa9.73□□□□□ -0.85
CTNND1-234ENST00000532844 TRAK2O60296 914 aa9.73□□□□□ -0.85
CTNND1-234ENST00000532844 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-234ENST00000532844 PRAM1Q96QH2 718 aa9.73□□□□□ -0.85
CTNND1-234ENST00000532844 NLRP6P59044 892 aa9.72□□□□□ -0.85
CTNND1-234ENST00000532844 WASHC4Q2M389 1173 aa9.72□□□□□ -0.85
CTNND1-234ENST00000532844 PAF1Q8N7H5 531 aa9.72□□□□□ -0.85
CTNND1-234ENST00000532844 PNISRQ8TF01 805 aaKnown RBP9.72□□□□□ -0.85
CTNND1-234ENST00000532844 CCDC47Q96A33 483 aaKnown RBP9.72□□□□□ -0.85
CTNND1-234ENST00000532844 CCDC173Q0VFZ6 552 aa9.72□□□□□ -0.85
CTNND1-234ENST00000532844 GNAI3P08754 354 aa9.72□□□□□ -0.85
CTNND1-234ENST00000532844 PSMA5P28066 241 aa9.72□□□□□ -0.85
CTNND1-234ENST00000532844 GCC1Q96CN9 775 aa9.72□□□□□ -0.85
CTNND1-234ENST00000532844 FSD1Q9BTV5 496 aa9.72□□□□□ -0.85
CTNND1-234ENST00000532844 DEF6Q9H4E7 631 aa9.72□□□□□ -0.85
CTNND1-234ENST00000532844 CCDC27Q2M243 656 aa9.72□□□□□ -0.85
CTNND1-234ENST00000532844 GAS2L2Q8NHY3 880 aa9.72□□□□□ -0.85
CTNND1-234ENST00000532844 CCDC39Q9UFE4 941 aa9.72□□□□□ -0.85
CTNND1-234ENST00000532844 DHX16O60231 1041 aaKnown RBP9.71□□□□□ -0.85
CTNND1-234ENST00000532844 NESP48681 1621 aa9.71□□□□□ -0.85
CTNND1-234ENST00000532844 CCDC184Q52MB2 194 aa9.71□□□□□ -0.85
CTNND1-234ENST00000532844 WWC2Q6AWC2 1192 aa9.71□□□□□ -0.85
CTNND1-234ENST00000532844 IFT57Q9NWB7 429 aa9.71□□□□□ -0.85
CTNND1-234ENST00000532844 SLC12A5Q9H2X9 1139 aa9.71□□□□□ -0.85
CTNND1-234ENST00000532844 NLRP2Q9NX02 1062 aa9.71□□□□□ -0.85
CTNND1-234ENST00000532844 SURF6O75683 361 aaKnown RBP9.71□□□□□ -0.86
CTNND1-234ENST00000532844 RALYLQ86SE5 291 aaKnown RBP9.71□□□□□ -0.86
CTNND1-234ENST00000532844 PLEKHH2Q8IVE3 1493 aa9.71□□□□□ -0.86
CTNND1-234ENST00000532844 KIAA0754O94854 1291 aa9.71□□□□□ -0.86
CTNND1-234ENST00000532844 CAVIN1Q6NZI2 390 aaKnown RBP9.71□□□□□ -0.86
CTNND1-234ENST00000532844 R3HCC1Q9Y3T6 440 aaKnown RBP9.7□□□□□ -0.86
CTNND1-234ENST00000532844 TROQ12816 1431 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-234ENST00000532844 SAMD1Q6SPF0 538 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-234ENST00000532844 RNF214Q8ND24 703 aa9.7□□□□□ -0.86
CTNND1-234ENST00000532844 SAFBQ15424 915 aaKnown RBP eCLIP9.7□□□□□ -0.86
CTNND1-234ENST00000532844 MYO6Q9UM54 1294 aa9.7□□□□□ -0.86
CTNND1-234ENST00000532844 MRC2Q9UBG0 1479 aa9.7□□□□□ -0.86
CTNND1-234ENST00000532844 TOPBP1Q92547 1522 aa9.7□□□□□ -0.86
CTNND1-234ENST00000532844 NEK4P51957 841 aa9.7□□□□□ -0.86
CTNND1-234ENST00000532844 RABEP1Q15276 862 aa9.7□□□□□ -0.86
CTNND1-234ENST00000532844 BACH2Q9BYV9 841 aa9.7□□□□□ -0.86
CTNND1-234ENST00000532844 CLASRPQ8N2M8 674 aaKnown RBP9.69□□□□□ -0.86
CTNND1-234ENST00000532844 CDK19Q9BWU1 502 aa9.69□□□□□ -0.86
CTNND1-234ENST00000532844 BRPF3Q9ULD4 1205 aa9.69□□□□□ -0.86
CTNND1-234ENST00000532844 ATF3P18847 181 aa9.69□□□□□ -0.86
CTNND1-234ENST00000532844 DNAJC2Q99543 621 aaKnown RBP9.69□□□□□ -0.86
CTNND1-234ENST00000532844 GNAI2P04899 355 aa9.69□□□□□ -0.86
CTNND1-234ENST00000532844 NAP1L1P55209 391 aaKnown RBP9.69□□□□□ -0.86
CTNND1-234ENST00000532844 ABTB2Q8N961 1025 aa9.69□□□□□ -0.86
CTNND1-234ENST00000532844 RBM33Q96EV2 1170 aaKnown RBP9.69□□□□□ -0.86
CTNND1-234ENST00000532844 PRPF40AO75400 957 aaKnown RBP9.69□□□□□ -0.86
CTNND1-234ENST00000532844 WDR63Q8IWG1 891 aa9.69□□□□□ -0.86
CTNND1-234ENST00000532844 FYB1O15117 783 aa9.69□□□□□ -0.86
CTNND1-234ENST00000532844 PCF11O94913 1555 aaKnown RBP9.68□□□□□ -0.86
CTNND1-234ENST00000532844 IFT140Q96RY7 1462 aa9.68□□□□□ -0.86
CTNND1-234ENST00000532844 KDM4AO75164 1064 aa9.68□□□□□ -0.86
CTNND1-234ENST00000532844 CT47A1Q5JQC4 288 aaPredicted RBP9.68□□□□□ -0.86
CTNND1-234ENST00000532844 CDK13Q14004 1512 aaKnown RBP9.68□□□□□ -0.86
CTNND1-234ENST00000532844 LETM1O95202 739 aaPredicted RBP9.68□□□□□ -0.86
CTNND1-234ENST00000532844 TSPY26PQ9H489 355 aa9.68□□□□□ -0.86
CTNND1-234ENST00000532844 POLA1P09884 1462 aaPredicted RBP9.68□□□□□ -0.86
CTNND1-234ENST00000532844 SLC4A2P04920 1241 aa9.68□□□□□ -0.86
CTNND1-234ENST00000532844 MVPQ14764 893 aaKnown RBP9.68□□□□□ -0.86
CTNND1-234ENST00000532844 SNAPC4Q5SXM2 1469 aa9.68□□□□□ -0.86
CTNND1-234ENST00000532844 ODF2Q5BJF6 829 aa9.68□□□□□ -0.86
CTNND1-234ENST00000532844 AXDND1Q5T1B0 1012 aaPredicted RBP9.68□□□□□ -0.86
CTNND1-234ENST00000532844 NAT10Q9H0A0 1025 aaKnown RBP9.68□□□□□ -0.86
CTNND1-234ENST00000532844 TXNDC2Q86VQ3 553 aa9.68□□□□□ -0.86
CTNND1-234ENST00000532844 OLFM4Q6UX06 510 aa9.67□□□□□ -0.86
CTNND1-234ENST00000532844 BCL11BQ9C0K0 894 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-234ENST00000532844 CABP1Q9NZU7 370 aa9.67□□□□□ -0.86
CTNND1-234ENST00000532844 GPRASP1Q5JY77 1395 aa9.67□□□□□ -0.86
CTNND1-234ENST00000532844 MCM2P49736 904 aa9.67□□□□□ -0.86
CTNND1-234ENST00000532844 PLEKHO1Q53GL0 409 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-234ENST00000532844 HIP1O00291 1037 aa9.67□□□□□ -0.86
CTNND1-234ENST00000532844 MBD3O95983 291 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms