RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 DCAF8L1A6NGE4 600 aa8.4□□□□□ -1.06
CTSB-216ENST00000530290 R3HDM1Q15032 1099 aaKnown RBP8.4□□□□□ -1.06
CTSB-216ENST00000530290 STK26Q9P289 416 aa8.4□□□□□ -1.06
CTSB-216ENST00000530290 FAM98CQ17RN3 349 aaKnown RBP8.39□□□□□ -1.07
CTSB-216ENST00000530290 FAM196AQ6ZSG2 479 aa8.39□□□□□ -1.07
CTSB-216ENST00000530290 NUP188Q5SRE5 1749 aa8.39□□□□□ -1.07
CTSB-216ENST00000530290 FAM83GA6ND36 823 aa8.38□□□□□ -1.07
CTSB-216ENST00000530290 EN1Q05925 392 aaPredicted RBP8.38□□□□□ -1.07
CTSB-216ENST00000530290 LMOD2Q6P5Q4 547 aa8.38□□□□□ -1.07
CTSB-216ENST00000530290 C14orf93Q9H972 538 aaKnown RBP8.38□□□□□ -1.07
CTSB-216ENST00000530290 BTG4Q9NY30 223 aa8.38□□□□□ -1.07
CTSB-216ENST00000530290 PHRF1Q9P1Y6 1649 aaKnown RBP8.37□□□□□ -1.07
CTSB-216ENST00000530290 NBPF8Q3BBV2 869 aa8.37□□□□□ -1.07
CTSB-216ENST00000530290 NBPF14Q5TI25 921 aa8.37□□□□□ -1.07
CTSB-216ENST00000530290 CABLES1Q8TDN4 633 aa8.37□□□□□ -1.07
CTSB-216ENST00000530290 SPATA31A1Q5TZJ5 1347 aa8.36□□□□□ -1.07
CTSB-216ENST00000530290 TMEM132EQ6IEE7 984 aa8.36□□□□□ -1.07
CTSB-216ENST00000530290 CAMKK2Q96RR4 588 aa8.36□□□□□ -1.07
CTSB-216ENST00000530290 PRDM11Q9NQV5 511 aa8.36□□□□□ -1.07
CTSB-216ENST00000530290 PARP4Q9UKK3 1724 aaKnown RBP8.35□□□□□ -1.07
CTSB-216ENST00000530290 RGL3Q3MIN7 710 aa8.35□□□□□ -1.07
CTSB-216ENST00000530290 BARGINQ6ZT62 677 aa8.35□□□□□ -1.07
CTSB-216ENST00000530290 STAC3Q96MF2 364 aa8.35□□□□□ -1.07
CTSB-216ENST00000530290 PRAM1Q96QH2 718 aa8.35□□□□□ -1.07
CTSB-216ENST00000530290 POGKQ9P215 609 aa8.35□□□□□ -1.07
CTSB-216ENST00000530290 ADGRB1O14514 1584 aa8.35□□□□□ -1.07
CTSB-216ENST00000530290 CHD4Q14839 1912 aa8.35□□□□□ -1.07
CTSB-216ENST00000530290 EZH2Q15910 746 aaKnown RBP8.34□□□□□ -1.07
CTSB-216ENST00000530290 SPON1Q9HCB6 807 aa8.34□□□□□ -1.07
CTSB-216ENST00000530290 THRAP3Q9Y2W1 955 aaKnown RBP8.34□□□□□ -1.07
CTSB-216ENST00000530290 APBA3O96018 575 aa8.33□□□□□ -1.08
CTSB-216ENST00000530290 SSH2Q76I76 1423 aa8.33□□□□□ -1.08
CTSB-216ENST00000530290 PPP1R1BQ9UD71 204 aaPredicted RBP8.33□□□□□ -1.08
CTSB-216ENST00000530290 CPDO75976 1380 aa8.33□□□□□ -1.08
CTSB-216ENST00000530290 KIAA0232Q92628 1395 aa8.33□□□□□ -1.08
CTSB-216ENST00000530290 NRKQ7Z2Y5 1582 aa8.32□□□□□ -1.08
CTSB-216ENST00000530290 TRIM37O94972 964 aa8.32□□□□□ -1.08
CTSB-216ENST00000530290 PDE3BQ13370 1112 aa8.32□□□□□ -1.08
CTSB-216ENST00000530290 NGDNQ8NEJ9 315 aaKnown RBP8.32□□□□□ -1.08
CTSB-216ENST00000530290 PMFBP1Q8TBY8 1022 aa8.32□□□□□ -1.08
CTSB-216ENST00000530290 MPHOSPH9Q99550 1183 aa8.32□□□□□ -1.08
CTSB-216ENST00000530290 TOPAZ1Q8N9V7 1692 aa8.32□□□□□ -1.08
CTSB-216ENST00000530290 LMO7Q8WWI1 1683 aa8.32□□□□□ -1.08
CTSB-216ENST00000530290 CEP350Q5VT06 3117 aa8.32□□□□□ -1.08
CTSB-216ENST00000530290 BRD4O60885 1362 aaPredicted RBP8.32□□□□□ -1.08
CTSB-216ENST00000530290 ARHGEF28Q8N1W1 1705 aaKnown RBP8.32□□□□□ -1.08
CTSB-216ENST00000530290 CAMTA1Q9Y6Y1 1673 aa8.31□□□□□ -1.08
CTSB-216ENST00000530290 OVOS2A0A0G2JMS6 1433 aa8.31□□□□□ -1.08
CTSB-216ENST00000530290 OVOS2A0A0J9YW53 1432 aa8.31□□□□□ -1.08
CTSB-216ENST00000530290 OVOS2Q6IE36 1432 aa8.31□□□□□ -1.08
CTSB-216ENST00000530290 CASZ1Q86V15 1759 aa8.31□□□□□ -1.08
CTSB-216ENST00000530290 WASLO00401 505 aaPredicted RBP8.31□□□□□ -1.08
CTSB-216ENST00000530290 SBF2Q86WG5 1849 aa8.31□□□□□ -1.08
CTSB-216ENST00000530290 UTRNP46939 3433 aa8.31□□□□□ -1.08
CTSB-216ENST00000530290 KCNQ2O43526 872 aa8.3□□□□□ -1.08
CTSB-216ENST00000530290 CFAP70Q5T0N1 1121 aa8.3□□□□□ -1.08
CTSB-216ENST00000530290 TCP11L2Q8N4U5 519 aa8.3□□□□□ -1.08
CTSB-216ENST00000530290 PRR36Q9H6K5 1346 aa8.29□□□□□ -1.08
CTSB-216ENST00000530290 BCL9O00512 1426 aa8.29□□□□□ -1.08
CTSB-216ENST00000530290 PEAK1Q9H792 1746 aa8.29□□□□□ -1.08
CTSB-216ENST00000530290 PAK3O75914 559 aaPredicted RBP8.29□□□□□ -1.08
CTSB-216ENST00000530290 SAFB2Q14151 953 aaKnown RBP eCLIP8.29□□□□□ -1.08
CTSB-216ENST00000530290 POLR3AO14802 1390 aaPredicted RBP8.29□□□□□ -1.08
CTSB-216ENST00000530290 AKAP12Q02952 1782 aa8.29□□□□□ -1.08
CTSB-216ENST00000530290 WNK3Q9BYP7 1800 aa8.29□□□□□ -1.08
CTSB-216ENST00000530290 USP19O94966 1318 aa8.29□□□□□ -1.08
CTSB-216ENST00000530290 PLSCR1O15162 318 aa8.28□□□□□ -1.08
CTSB-216ENST00000530290 PLEKHG5O94827 1062 aa8.28□□□□□ -1.08
CTSB-216ENST00000530290 EVA1CP58658 441 aa8.28□□□□□ -1.08
CTSB-216ENST00000530290 FAM182BQ5T319 152 aa8.28□□□□□ -1.08
CTSB-216ENST00000530290 STRN4Q9NRL3 753 aa8.28□□□□□ -1.08
CTSB-216ENST00000530290 KIAA1210Q9ULL0 1709 aa8.28□□□□□ -1.08
CTSB-216ENST00000530290 LRRC37A3O60309 1634 aa8.28□□□□□ -1.08
CTSB-216ENST00000530290 COL5A2P05997 1499 aaPredicted RBP8.27□□□□□ -1.09
CTSB-216ENST00000530290 AATKQ6ZMQ8 1374 aa8.27□□□□□ -1.09
CTSB-216ENST00000530290 CDCA7Q9BWT1 371 aaPredicted RBP8.27□□□□□ -1.09
CTSB-216ENST00000530290 CRB1P82279 1406 aa8.27□□□□□ -1.09
CTSB-216ENST00000530290 MINK1Q8N4C8 1332 aaPredicted RBP8.27□□□□□ -1.09
CTSB-216ENST00000530290 SLC34A2O95436 690 aa8.26□□□□□ -1.09
CTSB-216ENST00000530290 TRAK1Q9UPV9 953 aa8.26□□□□□ -1.09
CTSB-216ENST00000530290 MAP3K5Q99683 1374 aa8.25□□□□□ -1.09
CTSB-216ENST00000530290 ABCC6O95255 1503 aa8.25□□□□□ -1.09
CTSB-216ENST00000530290 MYOM1P52179 1685 aa8.25□□□□□ -1.09
CTSB-216ENST00000530290 CHRNA2Q15822 529 aa8.25□□□□□ -1.09
CTSB-216ENST00000530290 NUDT16Q96DE0 195 aaKnown RBP8.25□□□□□ -1.09
CTSB-216ENST00000530290 HIRIP3Q9BW71 556 aaPredicted RBP8.25□□□□□ -1.09
CTSB-216ENST00000530290 CCDC61Q9Y6R9 512 aa8.25□□□□□ -1.09
CTSB-216ENST00000530290 PLEKHG3A1L390 1219 aa8.24□□□□□ -1.09
CTSB-216ENST00000530290 ZC3H6P61129 1189 aaKnown RBP8.24□□□□□ -1.09
CTSB-216ENST00000530290 NLRP13Q86W25 1043 aa8.24□□□□□ -1.09
CTSB-216ENST00000530290 BCL11BQ9C0K0 894 aaPredicted RBP8.24□□□□□ -1.09
CTSB-216ENST00000530290 USP35Q9P2H5 1018 aa8.24□□□□□ -1.09
CTSB-216ENST00000530290 QRICH2Q9H0J4 1663 aa8.24□□□□□ -1.09
CTSB-216ENST00000530290 SLIT3O75094 1523 aa8.24□□□□□ -1.09
CTSB-216ENST00000530290 LARP1Q6PKG0 1096 aaKnown RBP8.23□□□□□ -1.09
CTSB-216ENST00000530290 ABTB2Q8N961 1025 aa8.23□□□□□ -1.09
CTSB-216ENST00000530290 ACEP12821 1306 aa8.23□□□□□ -1.09
CTSB-216ENST00000530290 GIGYF1O75420 1035 aaPredicted RBP8.22□□□□□ -1.09
CTSB-216ENST00000530290 DDB1Q16531 1140 aa8.22□□□□□ -1.09
CTSB-216ENST00000530290 PPARGC1BQ86YN6 1023 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms