RNA–Protein interactions for RNA: ENST00000526942.5

RPUSD4-203, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 5

Gene RPUSD4, Length 1,791 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-203ENST00000526942 FAM182BQ5T319 152 aa17.16■□□□□ 0.34
RPUSD4-203ENST00000526942 POGKQ9P215 609 aa17.16■□□□□ 0.34
RPUSD4-203ENST00000526942 SPATA31A5Q5VU36 1347 aa17.16■□□□□ 0.34
RPUSD4-203ENST00000526942 SPATA31A7Q8IWB4 1347 aa17.16■□□□□ 0.34
RPUSD4-203ENST00000526942 TNS1Q9HBL0 1735 aaKnown RBP17.15■□□□□ 0.34
RPUSD4-203ENST00000526942 R3HDM1Q15032 1099 aaKnown RBP17.15■□□□□ 0.34
RPUSD4-203ENST00000526942 GPRASP1Q5JY77 1395 aa17.14■□□□□ 0.34
RPUSD4-203ENST00000526942 CRYBG1Q9Y4K1 1723 aa17.14■□□□□ 0.33
RPUSD4-203ENST00000526942 ACIN1Q9UKV3 1341 aaKnown RBP17.14■□□□□ 0.33
RPUSD4-203ENST00000526942 ADGRB1O14514 1584 aa17.13■□□□□ 0.33
RPUSD4-203ENST00000526942 PRR36Q9H6K5 1346 aa17.13■□□□□ 0.33
RPUSD4-203ENST00000526942 TULP4Q9NRJ4 1543 aa17.13■□□□□ 0.33
RPUSD4-203ENST00000526942 EIF3AQ14152 1382 aaKnown RBP17.12■□□□□ 0.33
RPUSD4-203ENST00000526942 HIRIP3Q9BW71 556 aaPredicted RBP17.12■□□□□ 0.33
RPUSD4-203ENST00000526942 EZH2Q15910 746 aaKnown RBP17.1■□□□□ 0.33
RPUSD4-203ENST00000526942 PRDM11Q9NQV5 511 aa17.1■□□□□ 0.33
RPUSD4-203ENST00000526942 TRAK1Q9UPV9 953 aa17.1■□□□□ 0.33
RPUSD4-203ENST00000526942 MINK1Q8N4C8 1332 aaPredicted RBP17.09■□□□□ 0.33
RPUSD4-203ENST00000526942 NGDNQ8NEJ9 315 aaKnown RBP17.07■□□□□ 0.32
RPUSD4-203ENST00000526942 CAMKK2Q96RR4 588 aa17.07■□□□□ 0.32
RPUSD4-203ENST00000526942 SPATA31A1Q5TZJ5 1347 aa17.07■□□□□ 0.32
RPUSD4-203ENST00000526942 WASLO00401 505 aaPredicted RBP17.07■□□□□ 0.32
RPUSD4-203ENST00000526942 PAK3O75914 559 aaPredicted RBP17.07■□□□□ 0.32
RPUSD4-203ENST00000526942 TRIM37O94972 964 aa17.06■□□□□ 0.32
RPUSD4-203ENST00000526942 KIAA0232Q92628 1395 aa17.06■□□□□ 0.32
RPUSD4-203ENST00000526942 PHRF1Q9P1Y6 1649 aaKnown RBP17.05■□□□□ 0.32
RPUSD4-203ENST00000526942 FAM196AQ6ZSG2 479 aa17.05■□□□□ 0.32
RPUSD4-203ENST00000526942 PARD3Q8TEW0 1356 aa17.05■□□□□ 0.32
RPUSD4-203ENST00000526942 CHRNA2Q15822 529 aa17.04■□□□□ 0.32
RPUSD4-203ENST00000526942 ATP7BP35670 1465 aa17.04■□□□□ 0.32
RPUSD4-203ENST00000526942 RREB1Q92766 1687 aa17.03■□□□□ 0.32
RPUSD4-203ENST00000526942 STRN4Q9NRL3 753 aa17.03■□□□□ 0.32
RPUSD4-203ENST00000526942 ITSN1Q15811 1721 aa17.03■□□□□ 0.32
RPUSD4-203ENST00000526942 APBA3O96018 575 aa17.02■□□□□ 0.32
RPUSD4-203ENST00000526942 NUP188Q5SRE5 1749 aa17.01■□□□□ 0.31
RPUSD4-203ENST00000526942 SSH2Q76I76 1423 aa17■□□□□ 0.31
RPUSD4-203ENST00000526942 ZC3H6P61129 1189 aaKnown RBP17■□□□□ 0.31
RPUSD4-203ENST00000526942 NUDT16Q96DE0 195 aaKnown RBP17■□□□□ 0.31
RPUSD4-203ENST00000526942 ARHGEF28Q8N1W1 1705 aaKnown RBP16.99■□□□□ 0.31
RPUSD4-203ENST00000526942 BARGINQ6ZT62 677 aa16.99■□□□□ 0.31
RPUSD4-203ENST00000526942 USP35Q9P2H5 1018 aa16.99■□□□□ 0.31
RPUSD4-203ENST00000526942 NUTM2GQ5VZR2 741 aa16.98■□□□□ 0.31
RPUSD4-203ENST00000526942 KDM2AQ9Y2K7 1162 aa16.98■□□□□ 0.31
RPUSD4-203ENST00000526942 PDE3BQ13370 1112 aa16.97■□□□□ 0.31
RPUSD4-203ENST00000526942 NRKQ7Z2Y5 1582 aa16.97■□□□□ 0.31
RPUSD4-203ENST00000526942 DCAF11Q8TEB1 546 aa16.97■□□□□ 0.31
RPUSD4-203ENST00000526942 POLR3AO14802 1390 aaPredicted RBP16.96■□□□□ 0.31
RPUSD4-203ENST00000526942 TOPAZ1Q8N9V7 1692 aa16.96■□□□□ 0.31
RPUSD4-203ENST00000526942 YY1P25490 414 aa16.96■□□□□ 0.31
RPUSD4-203ENST00000526942 EVA1CP58658 441 aa16.96■□□□□ 0.31
RPUSD4-203ENST00000526942 LMO7Q8WWI1 1683 aa16.96■□□□□ 0.3
RPUSD4-203ENST00000526942 CAMTA1Q9Y6Y1 1673 aa16.96■□□□□ 0.3
RPUSD4-203ENST00000526942 NBPF8Q3BBV2 869 aa16.95■□□□□ 0.3
RPUSD4-203ENST00000526942 NBPF14Q5TI25 921 aa16.95■□□□□ 0.3
RPUSD4-203ENST00000526942 LARP1Q6PKG0 1096 aaKnown RBP16.94■□□□□ 0.3
RPUSD4-203ENST00000526942 ACEP12821 1306 aa16.94■□□□□ 0.3
RPUSD4-203ENST00000526942 CPDO75976 1380 aa16.94■□□□□ 0.3
RPUSD4-203ENST00000526942 RAB3GAP2Q9H2M9 1393 aa16.94■□□□□ 0.3
RPUSD4-203ENST00000526942 TCP11L2Q8N4U5 519 aa16.94■□□□□ 0.3
RPUSD4-203ENST00000526942 STAC3Q96MF2 364 aa16.93■□□□□ 0.3
RPUSD4-203ENST00000526942 CDK19Q9BWU1 502 aa16.93■□□□□ 0.3
RPUSD4-203ENST00000526942 USP19O94966 1318 aa16.92■□□□□ 0.3
RPUSD4-203ENST00000526942 PARP4Q9UKK3 1724 aaKnown RBP16.92■□□□□ 0.3
RPUSD4-203ENST00000526942 SPON1Q9HCB6 807 aa16.91■□□□□ 0.3
RPUSD4-203ENST00000526942 THRAP3Q9Y2W1 955 aaKnown RBP16.91■□□□□ 0.3
RPUSD4-203ENST00000526942 PLEKHG3A1L390 1219 aa16.9■□□□□ 0.3
RPUSD4-203ENST00000526942 ABTB2Q8N961 1025 aa16.9■□□□□ 0.3
RPUSD4-203ENST00000526942 PPP1R1BQ9UD71 204 aaPredicted RBP16.9■□□□□ 0.3
RPUSD4-203ENST00000526942 CCDC61Q9Y6R9 512 aa16.9■□□□□ 0.3
RPUSD4-203ENST00000526942 COL5A2P05997 1499 aaPredicted RBP16.9■□□□□ 0.3
RPUSD4-203ENST00000526942 KCNQ2O43526 872 aa16.89■□□□□ 0.3
RPUSD4-203ENST00000526942 NINLQ9Y2I6 1382 aa16.89■□□□□ 0.29
RPUSD4-203ENST00000526942 PEAK1Q9H792 1746 aa16.87■□□□□ 0.29
RPUSD4-203ENST00000526942 RGPD3A6NKT7 1758 aaPredicted RBP16.87■□□□□ 0.29
RPUSD4-203ENST00000526942 RGPD4Q7Z3J3 1758 aa16.87■□□□□ 0.29
RPUSD4-203ENST00000526942 OVOS2A0A0G2JMS6 1433 aa16.87■□□□□ 0.29
RPUSD4-203ENST00000526942 OVOS2A0A0J9YW53 1432 aa16.87■□□□□ 0.29
RPUSD4-203ENST00000526942 OVOS2Q6IE36 1432 aa16.87■□□□□ 0.29
RPUSD4-203ENST00000526942 C11orf95C9JLR9 678 aaPredicted RBP16.87■□□□□ 0.29
RPUSD4-203ENST00000526942 GCP02774 474 aa16.87■□□□□ 0.29
RPUSD4-203ENST00000526942 NLRP13Q86W25 1043 aa16.86■□□□□ 0.29
RPUSD4-203ENST00000526942 CCER1Q8TC90 406 aaPredicted RBP16.86■□□□□ 0.29
RPUSD4-203ENST00000526942 CRB1P82279 1406 aa16.86■□□□□ 0.29
RPUSD4-203ENST00000526942 LRRC37A3O60309 1634 aa16.85■□□□□ 0.29
RPUSD4-203ENST00000526942 DCAF8L1A6NGE4 600 aa16.84■□□□□ 0.29
RPUSD4-203ENST00000526942 ANO8Q9HCE9 1232 aaPredicted RBP16.84■□□□□ 0.29
RPUSD4-203ENST00000526942 PPIP5K1Q6PFW1 1433 aa16.83■□□□□ 0.29
RPUSD4-203ENST00000526942 CASZ1Q86V15 1759 aa16.83■□□□□ 0.28
RPUSD4-203ENST00000526942 PLSCR1O15162 318 aa16.83■□□□□ 0.28
RPUSD4-203ENST00000526942 KIAA1210Q9ULL0 1709 aa16.83■□□□□ 0.28
RPUSD4-203ENST00000526942 SBF2Q86WG5 1849 aa16.82■□□□□ 0.28
RPUSD4-203ENST00000526942 BRD4O60885 1362 aaPredicted RBP16.81■□□□□ 0.28
RPUSD4-203ENST00000526942 AATKQ6ZMQ8 1374 aa16.81■□□□□ 0.28
RPUSD4-203ENST00000526942 SLIT3O75094 1523 aa16.81■□□□□ 0.28
RPUSD4-203ENST00000526942 ZBTB7CA1YPR0 619 aa16.8■□□□□ 0.28
RPUSD4-203ENST00000526942 SRPK2P78362 688 aaKnown RBP16.8■□□□□ 0.28
RPUSD4-203ENST00000526942 DDB1Q16531 1140 aa16.8■□□□□ 0.28
RPUSD4-203ENST00000526942 PTF1AQ7RTS3 328 aa16.79■□□□□ 0.28
RPUSD4-203ENST00000526942 BCL11BQ9C0K0 894 aaPredicted RBP16.79■□□□□ 0.28
RPUSD4-203ENST00000526942 WNK3Q9BYP7 1800 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms