RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 RREB1Q92766 1687 aa18.66■□□□□ 0.58
CCDC90B-205ENST00000525916 PHRF1Q9P1Y6 1649 aaKnown RBP18.65■□□□□ 0.58
CCDC90B-205ENST00000525916 SPATA31A5Q5VU36 1347 aa18.65■□□□□ 0.58
CCDC90B-205ENST00000525916 SPATA31A7Q8IWB4 1347 aa18.65■□□□□ 0.58
CCDC90B-205ENST00000525916 ITSN1Q15811 1721 aa18.63■□□□□ 0.57
CCDC90B-205ENST00000525916 NUP188Q5SRE5 1749 aa18.63■□□□□ 0.57
CCDC90B-205ENST00000525916 EZH2Q15910 746 aaKnown RBP18.63■□□□□ 0.57
CCDC90B-205ENST00000525916 POGKQ9P215 609 aa18.62■□□□□ 0.57
CCDC90B-205ENST00000525916 TULP4Q9NRJ4 1543 aa18.62■□□□□ 0.57
CCDC90B-205ENST00000525916 ADGRB1O14514 1584 aa18.62■□□□□ 0.57
CCDC90B-205ENST00000525916 GPRASP1Q5JY77 1395 aa18.61■□□□□ 0.57
CCDC90B-205ENST00000525916 PRR36Q9H6K5 1346 aa18.61■□□□□ 0.57
CCDC90B-205ENST00000525916 ACIN1Q9UKV3 1341 aaKnown RBP18.61■□□□□ 0.57
CCDC90B-205ENST00000525916 HIRIP3Q9BW71 556 aaPredicted RBP18.61■□□□□ 0.57
CCDC90B-205ENST00000525916 TRIM37O94972 964 aa18.58■□□□□ 0.56
CCDC90B-205ENST00000525916 PRDM11Q9NQV5 511 aa18.58■□□□□ 0.56
CCDC90B-205ENST00000525916 MINK1Q8N4C8 1332 aaPredicted RBP18.57■□□□□ 0.56
CCDC90B-205ENST00000525916 CAMKK2Q96RR4 588 aa18.57■□□□□ 0.56
CCDC90B-205ENST00000525916 ARHGEF28Q8N1W1 1705 aaKnown RBP18.57■□□□□ 0.56
CCDC90B-205ENST00000525916 EIF3AQ14152 1382 aaKnown RBP18.56■□□□□ 0.56
CCDC90B-205ENST00000525916 SPATA31A1Q5TZJ5 1347 aa18.56■□□□□ 0.56
CCDC90B-205ENST00000525916 TRAK1Q9UPV9 953 aa18.56■□□□□ 0.56
CCDC90B-205ENST00000525916 PAK3O75914 559 aaPredicted RBP18.55■□□□□ 0.56
CCDC90B-205ENST00000525916 KIAA0232Q92628 1395 aa18.55■□□□□ 0.56
CCDC90B-205ENST00000525916 CHRNA2Q15822 529 aa18.54■□□□□ 0.56
CCDC90B-205ENST00000525916 STRN4Q9NRL3 753 aa18.54■□□□□ 0.56
CCDC90B-205ENST00000525916 FAM196AQ6ZSG2 479 aa18.53■□□□□ 0.56
CCDC90B-205ENST00000525916 NGDNQ8NEJ9 315 aaKnown RBP18.53■□□□□ 0.56
CCDC90B-205ENST00000525916 PARD3Q8TEW0 1356 aa18.53■□□□□ 0.56
CCDC90B-205ENST00000525916 APBA3O96018 575 aa18.52■□□□□ 0.56
CCDC90B-205ENST00000525916 TOPAZ1Q8N9V7 1692 aa18.52■□□□□ 0.56
CCDC90B-205ENST00000525916 ATP7BP35670 1465 aa18.52■□□□□ 0.55
CCDC90B-205ENST00000525916 NRKQ7Z2Y5 1582 aa18.51■□□□□ 0.55
CCDC90B-205ENST00000525916 WASLO00401 505 aaPredicted RBP18.51■□□□□ 0.55
CCDC90B-205ENST00000525916 YY1P25490 414 aa18.5■□□□□ 0.55
CCDC90B-205ENST00000525916 USP35Q9P2H5 1018 aa18.5■□□□□ 0.55
CCDC90B-205ENST00000525916 SBF2Q86WG5 1849 aa18.5■□□□□ 0.55
CCDC90B-205ENST00000525916 LMO7Q8WWI1 1683 aa18.5■□□□□ 0.55
CCDC90B-205ENST00000525916 PARP4Q9UKK3 1724 aaKnown RBP18.49■□□□□ 0.55
CCDC90B-205ENST00000525916 CAMTA1Q9Y6Y1 1673 aa18.49■□□□□ 0.55
CCDC90B-205ENST00000525916 SSH2Q76I76 1423 aa18.49■□□□□ 0.55
CCDC90B-205ENST00000525916 ZC3H6P61129 1189 aaKnown RBP18.48■□□□□ 0.55
CCDC90B-205ENST00000525916 NUTM2GQ5VZR2 741 aa18.47■□□□□ 0.55
CCDC90B-205ENST00000525916 RGPD3A6NKT7 1758 aaPredicted RBP18.46■□□□□ 0.55
CCDC90B-205ENST00000525916 RGPD4Q7Z3J3 1758 aa18.46■□□□□ 0.55
CCDC90B-205ENST00000525916 PDE3BQ13370 1112 aa18.45■□□□□ 0.54
CCDC90B-205ENST00000525916 BARGINQ6ZT62 677 aa18.44■□□□□ 0.54
CCDC90B-205ENST00000525916 KDM2AQ9Y2K7 1162 aa18.44■□□□□ 0.54
CCDC90B-205ENST00000525916 PEAK1Q9H792 1746 aa18.43■□□□□ 0.54
CCDC90B-205ENST00000525916 EVA1CP58658 441 aa18.43■□□□□ 0.54
CCDC90B-205ENST00000525916 NBPF8Q3BBV2 869 aa18.43■□□□□ 0.54
CCDC90B-205ENST00000525916 NBPF14Q5TI25 921 aa18.43■□□□□ 0.54
CCDC90B-205ENST00000525916 NUDT16Q96DE0 195 aaKnown RBP18.43■□□□□ 0.54
CCDC90B-205ENST00000525916 WNK3Q9BYP7 1800 aa18.43■□□□□ 0.54
CCDC90B-205ENST00000525916 CASZ1Q86V15 1759 aa18.42■□□□□ 0.54
CCDC90B-205ENST00000525916 LARP1Q6PKG0 1096 aaKnown RBP18.42■□□□□ 0.54
CCDC90B-205ENST00000525916 PPP1R1BQ9UD71 204 aaPredicted RBP18.42■□□□□ 0.54
CCDC90B-205ENST00000525916 LRRC37A3O60309 1634 aa18.41■□□□□ 0.54
CCDC90B-205ENST00000525916 TCP11L2Q8N4U5 519 aa18.4■□□□□ 0.54
CCDC90B-205ENST00000525916 DCAF11Q8TEB1 546 aa18.4■□□□□ 0.54
CCDC90B-205ENST00000525916 SPON1Q9HCB6 807 aa18.4■□□□□ 0.54
CCDC90B-205ENST00000525916 POLR3AO14802 1390 aaPredicted RBP18.4■□□□□ 0.54
CCDC90B-205ENST00000525916 AKAP12Q02952 1782 aa18.4■□□□□ 0.54
CCDC90B-205ENST00000525916 KCNQ2O43526 872 aa18.39■□□□□ 0.53
CCDC90B-205ENST00000525916 ACEP12821 1306 aa18.39■□□□□ 0.53
CCDC90B-205ENST00000525916 NINLQ9Y2I6 1382 aa18.39■□□□□ 0.53
CCDC90B-205ENST00000525916 CPDO75976 1380 aa18.38■□□□□ 0.53
CCDC90B-205ENST00000525916 CDK19Q9BWU1 502 aa18.37■□□□□ 0.53
CCDC90B-205ENST00000525916 USP19O94966 1318 aa18.37■□□□□ 0.53
CCDC90B-205ENST00000525916 COL5A2P05997 1499 aaPredicted RBP18.37■□□□□ 0.53
CCDC90B-205ENST00000525916 MYOM1P52179 1685 aa18.37■□□□□ 0.53
CCDC90B-205ENST00000525916 RAB3GAP2Q9H2M9 1393 aa18.36■□□□□ 0.53
CCDC90B-205ENST00000525916 OVOS2A0A0G2JMS6 1433 aa18.35■□□□□ 0.53
CCDC90B-205ENST00000525916 OVOS2A0A0J9YW53 1432 aa18.35■□□□□ 0.53
CCDC90B-205ENST00000525916 OVOS2Q6IE36 1432 aa18.35■□□□□ 0.53
CCDC90B-205ENST00000525916 ABTB2Q8N961 1025 aa18.35■□□□□ 0.53
CCDC90B-205ENST00000525916 THRAP3Q9Y2W1 955 aaKnown RBP18.35■□□□□ 0.53
CCDC90B-205ENST00000525916 CHD4Q14839 1912 aa18.35■□□□□ 0.53
CCDC90B-205ENST00000525916 RGPD5Q99666 1765 aa18.35■□□□□ 0.53
CCDC90B-205ENST00000525916 DCAF8L1A6NGE4 600 aa18.34■□□□□ 0.53
CCDC90B-205ENST00000525916 KIAA1210Q9ULL0 1709 aa18.34■□□□□ 0.53
CCDC90B-205ENST00000525916 ANO8Q9HCE9 1232 aaPredicted RBP18.33■□□□□ 0.52
CCDC90B-205ENST00000525916 CCDC61Q9Y6R9 512 aa18.33■□□□□ 0.52
CCDC90B-205ENST00000525916 CRB1P82279 1406 aa18.32■□□□□ 0.52
CCDC90B-205ENST00000525916 COL18A1P39060 1754 aa18.32■□□□□ 0.52
CCDC90B-205ENST00000525916 PLEKHG3A1L390 1219 aa18.31■□□□□ 0.52
CCDC90B-205ENST00000525916 GCP02774 474 aa18.3■□□□□ 0.52
CCDC90B-205ENST00000525916 QRICH2Q9H0J4 1663 aa18.29■□□□□ 0.52
CCDC90B-205ENST00000525916 ZBTB7CA1YPR0 619 aa18.29■□□□□ 0.52
CCDC90B-205ENST00000525916 NLRP13Q86W25 1043 aa18.29■□□□□ 0.52
CCDC90B-205ENST00000525916 STAC3Q96MF2 364 aa18.29■□□□□ 0.52
CCDC90B-205ENST00000525916 PDGFDQ9GZP0 370 aaPredicted RBP18.29■□□□□ 0.52
CCDC90B-205ENST00000525916 PPIP5K1Q6PFW1 1433 aa18.29■□□□□ 0.52
CCDC90B-205ENST00000525916 PIK3C2AO00443 1686 aa18.28■□□□□ 0.52
CCDC90B-205ENST00000525916 C11orf95C9JLR9 678 aaPredicted RBP18.28■□□□□ 0.52
CCDC90B-205ENST00000525916 PTF1AQ7RTS3 328 aa18.28■□□□□ 0.52
CCDC90B-205ENST00000525916 SLIT3O75094 1523 aa18.28■□□□□ 0.52
CCDC90B-205ENST00000525916 PLSCR1O15162 318 aa18.27■□□□□ 0.52
CCDC90B-205ENST00000525916 DDB1Q16531 1140 aa18.26■□□□□ 0.51
CCDC90B-205ENST00000525916 ZBTB7AO95365 584 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms