RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 CARNS1A5YM72 827 aa9.95□□□□□ -0.82
ATM-208ENST00000525537 ZNF428Q96B54 188 aa9.95□□□□□ -0.82
ATM-208ENST00000525537 VRTNQ9H8Y1 702 aa9.95□□□□□ -0.82
ATM-208ENST00000525537 IVNS1ABPQ9Y6Y0 642 aa9.95□□□□□ -0.82
ATM-208ENST00000525537 TMEM88BA6NKF7 163 aa9.94□□□□□ -0.82
ATM-208ENST00000525537 EPS8L1Q8TE68 723 aa9.94□□□□□ -0.82
ATM-208ENST00000525537 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.94□□□□□ -0.82
ATM-208ENST00000525537 MAFBQ9Y5Q3 323 aaPredicted RBP9.94□□□□□ -0.82
ATM-208ENST00000525537 C6orf229H3BNL8 230 aa9.93□□□□□ -0.82
ATM-208ENST00000525537 SEMA3FQ13275 785 aa9.93□□□□□ -0.82
ATM-208ENST00000525537 FAM98CQ17RN3 349 aaKnown RBP9.93□□□□□ -0.82
ATM-208ENST00000525537 CCDC27Q2M243 656 aa9.93□□□□□ -0.82
ATM-208ENST00000525537 GRIPAP1Q4V328 841 aa9.93□□□□□ -0.82
ATM-208ENST00000525537 SWT1Q5T5J6 900 aaKnown RBP9.93□□□□□ -0.82
ATM-208ENST00000525537 SND1Q7KZF4 910 aaKnown RBP eCLIP9.93□□□□□ -0.82
ATM-208ENST00000525537 SLF2Q8IX21 1173 aa9.93□□□□□ -0.82
ATM-208ENST00000525537 LRCH3Q96II8 777 aa9.92□□□□□ -0.82
ATM-208ENST00000525537 AMOTL2Q9Y2J4 779 aa9.92□□□□□ -0.82
ATM-208ENST00000525537 V9GY48 417 aaPredicted RBP9.92□□□□□ -0.82
ATM-208ENST00000525537 PNMA1Q8ND90 353 aa9.91□□□□□ -0.82
ATM-208ENST00000525537 E9PSI1 815 aa9.9□□□□□ -0.82
ATM-208ENST00000525537 TJAP1Q5JTD0 557 aa9.9□□□□□ -0.82
ATM-208ENST00000525537 FUT2Q10981 343 aa9.89□□□□□ -0.83
ATM-208ENST00000525537 NR6A1Q15406 480 aa9.89□□□□□ -0.83
ATM-208ENST00000525537 CDCA8Q53HL2 280 aa9.89□□□□□ -0.83
ATM-208ENST00000525537 TBC1D9Q6ZT07 1266 aa9.89□□□□□ -0.83
ATM-208ENST00000525537 ATP9BO43861 1147 aa9.88□□□□□ -0.83
ATM-208ENST00000525537 SLC4A3P48751 1232 aa9.88□□□□□ -0.83
ATM-208ENST00000525537 EIF4G2P78344 907 aaKnown RBP eCLIP9.88□□□□□ -0.83
ATM-208ENST00000525537 B4GALNT3Q6L9W6 998 aa9.88□□□□□ -0.83
ATM-208ENST00000525537 GNEQ9Y223 722 aaKnown RBP9.88□□□□□ -0.83
ATM-208ENST00000525537 HDGFP51858 240 aaKnown RBP9.87□□□□□ -0.83
ATM-208ENST00000525537 PPP1R18Q6NYC8 613 aa9.87□□□□□ -0.83
ATM-208ENST00000525537 ATP6V1AP38606 617 aa9.86□□□□□ -0.83
ATM-208ENST00000525537 ELOAQ14241 798 aaKnown RBP9.86□□□□□ -0.83
ATM-208ENST00000525537 PDZRN3Q9UPQ7 1066 aa9.86□□□□□ -0.83
ATM-208ENST00000525537 PER1O15534 1290 aaPredicted RBP9.85□□□□□ -0.83
ATM-208ENST00000525537 SYMPKQ92797 1274 aaKnown RBP9.85□□□□□ -0.83
ATM-208ENST00000525537 CFHP08603 1231 aa9.84□□□□□ -0.83
ATM-208ENST00000525537 DESI1Q6ICB0 168 aa9.84□□□□□ -0.83
ATM-208ENST00000525537 PPP4CP60510 307 aa9.83□□□□□ -0.84
ATM-208ENST00000525537 NR1H3Q13133 447 aa9.83□□□□□ -0.84
ATM-208ENST00000525537 KANK4Q5T7N3 995 aaPredicted RBP9.83□□□□□ -0.84
ATM-208ENST00000525537 RETREG3Q86VR2 466 aa9.83□□□□□ -0.84
ATM-208ENST00000525537 NFATC2IPQ8NCF5 419 aa9.82□□□□□ -0.84
ATM-208ENST00000525537 MTRQ99707 1265 aa9.82□□□□□ -0.84
ATM-208ENST00000525537 IL21Q9HBE4 155 aa9.81□□□□□ -0.84
ATM-208ENST00000525537 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.81□□□□□ -0.84
ATM-208ENST00000525537 ZMIZ1Q9ULJ6 1067 aa9.8□□□□□ -0.84
ATM-208ENST00000525537 TMEM164Q5U3C3 297 aa9.79□□□□□ -0.84
ATM-208ENST00000525537 CCER1Q8TC90 406 aaPredicted RBP9.79□□□□□ -0.84
ATM-208ENST00000525537 ZBBXA8MT70 800 aa9.78□□□□□ -0.84
ATM-208ENST00000525537 FBXO45P0C2W1 286 aa9.78□□□□□ -0.84
ATM-208ENST00000525537 Q3C1V9 767 aa9.78□□□□□ -0.84
ATM-208ENST00000525537 LYPD8Q6UX82 237 aa9.78□□□□□ -0.84
ATM-208ENST00000525537 PIK3CDO00329 1044 aa9.77□□□□□ -0.85
ATM-208ENST00000525537 KMT5BQ4FZB7 885 aa9.77□□□□□ -0.85
ATM-208ENST00000525537 MORN1Q5T089 497 aa9.77□□□□□ -0.85
ATM-208ENST00000525537 SAMD7Q7Z3H4 446 aa9.77□□□□□ -0.85
ATM-208ENST00000525537 TXNDC2Q86VQ3 553 aa9.77□□□□□ -0.85
ATM-208ENST00000525537 PLEKHM2Q8IWE5 1019 aa9.77□□□□□ -0.85
ATM-208ENST00000525537 STK32AQ8WU08 396 aa9.77□□□□□ -0.85
ATM-208ENST00000525537 ZNF516Q92618 1163 aa9.77□□□□□ -0.85
ATM-208ENST00000525537 NOVA2Q9UNW9 492 aaKnown RBP9.77□□□□□ -0.85
ATM-208ENST00000525537 USP17L3A6NCW0 530 aa9.76□□□□□ -0.85
ATM-208ENST00000525537 USP17L4A6NCW7 530 aa9.76□□□□□ -0.85
ATM-208ENST00000525537 USP17L2Q6R6M4 530 aa9.76□□□□□ -0.85
ATM-208ENST00000525537 USP17L1Q7RTZ2 530 aa9.76□□□□□ -0.85
ATM-208ENST00000525537 IGSF3O75054 1194 aa9.75□□□□□ -0.85
ATM-208ENST00000525537 FKBPLQ9UIM3 349 aa9.75□□□□□ -0.85
ATM-208ENST00000525537 ZC3H4Q9UPT8 1303 aaKnown RBP9.75□□□□□ -0.85
ATM-208ENST00000525537 FAM196BA6NMK8 535 aa9.74□□□□□ -0.85
ATM-208ENST00000525537 USP17L5A8MUK1 530 aa9.74□□□□□ -0.85
ATM-208ENST00000525537 SKIP12755 728 aa9.74□□□□□ -0.85
ATM-208ENST00000525537 PHLDB3Q6NSJ2 640 aa9.74□□□□□ -0.85
ATM-208ENST00000525537 SLC27A5Q9Y2P5 690 aa9.74□□□□□ -0.85
ATM-208ENST00000525537 ACTN4O43707 911 aaKnown RBP9.72□□□□□ -0.85
ATM-208ENST00000525537 RNF40O75150 1001 aa9.72□□□□□ -0.85
ATM-208ENST00000525537 LOC105371045A0A1W2PR82 267 aa9.71□□□□□ -0.86
ATM-208ENST00000525537 RBM47A0AV96 593 aaKnown RBP9.71□□□□□ -0.86
ATM-208ENST00000525537 POTECB2RU33 542 aa9.71□□□□□ -0.86
ATM-208ENST00000525537 SSFA2P28290 1259 aa9.71□□□□□ -0.86
ATM-208ENST00000525537 ARID4AP29374 1257 aaPredicted RBP9.71□□□□□ -0.86
ATM-208ENST00000525537 PUS10Q3MIT2 529 aaKnown RBP9.71□□□□□ -0.86
ATM-208ENST00000525537 NKX2-3Q8TAU0 364 aa9.71□□□□□ -0.86
ATM-208ENST00000525537 USP17L15C9J2P7 530 aa9.7□□□□□ -0.86
ATM-208ENST00000525537 USP17L10C9JJH3 530 aa9.7□□□□□ -0.86
ATM-208ENST00000525537 USP17L13C9JLJ4 530 aa9.7□□□□□ -0.86
ATM-208ENST00000525537 USP17L12C9JPN9 530 aa9.7□□□□□ -0.86
ATM-208ENST00000525537 USP17L11C9JVI0 530 aa9.7□□□□□ -0.86
ATM-208ENST00000525537 USP17L21D6R901 530 aa9.7□□□□□ -0.86
ATM-208ENST00000525537 USP17L18D6R9N7 530 aa9.7□□□□□ -0.86
ATM-208ENST00000525537 USP17L22D6RA61 530 aa9.7□□□□□ -0.86
ATM-208ENST00000525537 USP17L17D6RBQ6 530 aa9.7□□□□□ -0.86
ATM-208ENST00000525537 USP17L19D6RCP7 530 aa9.7□□□□□ -0.86
ATM-208ENST00000525537 USP17L20D6RJB6 530 aa9.7□□□□□ -0.86
ATM-208ENST00000525537 F12P00748 615 aaPredicted RBP9.7□□□□□ -0.86
ATM-208ENST00000525537 ERCC3P19447 782 aa9.7□□□□□ -0.86
ATM-208ENST00000525537 USP17L24Q0WX57 530 aa9.7□□□□□ -0.86
ATM-208ENST00000525537 TRIM67Q6ZTA4 783 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms