RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 ALS2Q96Q42 1657 aa26.53■■□□□ 1.84
PVT1-220ENST00000524165 ANKRD30BQ9BXX2 1392 aa26.5■■□□□ 1.83
PVT1-220ENST00000524165 KCNQ2O43526 872 aa26.49■■□□□ 1.83
PVT1-220ENST00000524165 CRYBG1Q9Y4K1 1723 aa26.48■■□□□ 1.83
PVT1-220ENST00000524165 PIK3C2GO75747 1445 aa26.48■■□□□ 1.83
PVT1-220ENST00000524165 SPATA31A1Q5TZJ5 1347 aa26.47■■□□□ 1.83
PVT1-220ENST00000524165 CAMTA1Q9Y6Y1 1673 aa26.47■■□□□ 1.83
PVT1-220ENST00000524165 ANKARQ7Z5J8 1434 aa26.47■■□□□ 1.83
PVT1-220ENST00000524165 PMFBP1Q8TBY8 1022 aa26.45■■□□□ 1.82
PVT1-220ENST00000524165 IFFO2Q5TF58 517 aa26.43■■□□□ 1.82
PVT1-220ENST00000524165 SLC4A1APQ9BWU0 796 aaKnown RBP26.43■■□□□ 1.82
PVT1-220ENST00000524165 SPATA31E1Q6ZUB1 1445 aa26.42■■□□□ 1.82
PVT1-220ENST00000524165 ZNF784Q8NCA9 323 aaPredicted RBP26.42■■□□□ 1.82
PVT1-220ENST00000524165 PRDM11Q9NQV5 511 aa26.41■■□□□ 1.82
PVT1-220ENST00000524165 GPRASP1Q5JY77 1395 aa26.41■■□□□ 1.82
PVT1-220ENST00000524165 RGL3Q3MIN7 710 aa26.4■■□□□ 1.82
PVT1-220ENST00000524165 SENP3-EIF4A1A0A087X0R7 540 aa26.37■■□□□ 1.81
PVT1-220ENST00000524165 PDE3BQ13370 1112 aa26.36■■□□□ 1.81
PVT1-220ENST00000524165 ACIN1Q9UKV3 1341 aaKnown RBP26.36■■□□□ 1.81
PVT1-220ENST00000524165 DHX57Q6P158 1386 aaKnown RBP26.35■■□□□ 1.81
PVT1-220ENST00000524165 BARGINQ6ZT62 677 aa26.35■■□□□ 1.81
PVT1-220ENST00000524165 CHD4Q14839 1912 aa26.35■■□□□ 1.81
PVT1-220ENST00000524165 PRAM1Q96QH2 718 aa26.34■■□□□ 1.81
PVT1-220ENST00000524165 C14orf93Q9H972 538 aaKnown RBP26.34■■□□□ 1.81
PVT1-220ENST00000524165 UTRNP46939 3433 aa26.33■■□□□ 1.81
PVT1-220ENST00000524165 RGPD3A6NKT7 1758 aaPredicted RBP26.33■■□□□ 1.81
PVT1-220ENST00000524165 RGPD4Q7Z3J3 1758 aa26.33■■□□□ 1.81
PVT1-220ENST00000524165 KIAA0232Q92628 1395 aa26.33■■□□□ 1.8
PVT1-220ENST00000524165 SAFB2Q14151 953 aaKnown RBP eCLIP26.32■■□□□ 1.8
PVT1-220ENST00000524165 STRN4Q9NRL3 753 aa26.32■■□□□ 1.8
PVT1-220ENST00000524165 CASZ1Q86V15 1759 aa26.32■■□□□ 1.8
PVT1-220ENST00000524165 DLC1Q96QB1 1528 aa26.31■■□□□ 1.8
PVT1-220ENST00000524165 NRKQ7Z2Y5 1582 aa26.31■■□□□ 1.8
PVT1-220ENST00000524165 C1QTNF8P60827 252 aa26.3■■□□□ 1.8
PVT1-220ENST00000524165 PHRF1Q9P1Y6 1649 aaKnown RBP26.29■■□□□ 1.8
PVT1-220ENST00000524165 EIF3AQ14152 1382 aaKnown RBP26.29■■□□□ 1.8
PVT1-220ENST00000524165 C11orf95C9JLR9 678 aaPredicted RBP26.27■■□□□ 1.8
PVT1-220ENST00000524165 CHRNA2Q15822 529 aa26.27■■□□□ 1.8
PVT1-220ENST00000524165 POGKQ9P215 609 aa26.27■■□□□ 1.8
PVT1-220ENST00000524165 USP35Q9P2H5 1018 aa26.27■■□□□ 1.8
PVT1-220ENST00000524165 TULP4Q9NRJ4 1543 aa26.26■■□□□ 1.79
PVT1-220ENST00000524165 SSH2Q76I76 1423 aa26.26■■□□□ 1.79
PVT1-220ENST00000524165 PAK3O75914 559 aaPredicted RBP26.25■■□□□ 1.79
PVT1-220ENST00000524165 MYOM1P52179 1685 aa26.25■■□□□ 1.79
PVT1-220ENST00000524165 PRR36Q9H6K5 1346 aa26.24■■□□□ 1.79
PVT1-220ENST00000524165 CFAP70Q5T0N1 1121 aa26.24■■□□□ 1.79
PVT1-220ENST00000524165 PARP4Q9UKK3 1724 aaKnown RBP26.24■■□□□ 1.79
PVT1-220ENST00000524165 EVA1CP58658 441 aa26.23■■□□□ 1.79
PVT1-220ENST00000524165 PLSCR1O15162 318 aa26.22■■□□□ 1.79
PVT1-220ENST00000524165 TCP11L2Q8N4U5 519 aa26.22■■□□□ 1.79
PVT1-220ENST00000524165 NGDNQ8NEJ9 315 aaKnown RBP26.22■■□□□ 1.79
PVT1-220ENST00000524165 SBF2Q86WG5 1849 aa26.22■■□□□ 1.79
PVT1-220ENST00000524165 ZC3H6P61129 1189 aaKnown RBP26.2■■□□□ 1.78
PVT1-220ENST00000524165 THRAP3Q9Y2W1 955 aaKnown RBP26.2■■□□□ 1.78
PVT1-220ENST00000524165 PEAK1Q9H792 1746 aa26.19■■□□□ 1.78
PVT1-220ENST00000524165 ATP7BP35670 1465 aa26.19■■□□□ 1.78
PVT1-220ENST00000524165 ANO8Q9HCE9 1232 aaPredicted RBP26.19■■□□□ 1.78
PVT1-220ENST00000524165 PTGER2P43116 358 aa26.18■■□□□ 1.78
PVT1-220ENST00000524165 ITSN1Q15811 1721 aa26.18■■□□□ 1.78
PVT1-220ENST00000524165 HIRIP3Q9BW71 556 aaPredicted RBP26.18■■□□□ 1.78
PVT1-220ENST00000524165 LARP1Q6PKG0 1096 aaKnown RBP26.17■■□□□ 1.78
PVT1-220ENST00000524165 LMO7Q8WWI1 1683 aa26.16■■□□□ 1.78
PVT1-220ENST00000524165 OVOS2A0A0G2JMS6 1433 aa26.16■■□□□ 1.78
PVT1-220ENST00000524165 OVOS2A0A0J9YW53 1432 aa26.16■■□□□ 1.78
PVT1-220ENST00000524165 OVOS2Q6IE36 1432 aa26.16■■□□□ 1.78
PVT1-220ENST00000524165 WASLO00401 505 aaPredicted RBP26.15■■□□□ 1.78
PVT1-220ENST00000524165 SYT17Q9BSW7 474 aa26.15■■□□□ 1.78
PVT1-220ENST00000524165 ZBTB7AO95365 584 aa26.14■■□□□ 1.78
PVT1-220ENST00000524165 PDGFDQ9GZP0 370 aaPredicted RBP26.14■■□□□ 1.78
PVT1-220ENST00000524165 MINK1Q8N4C8 1332 aaPredicted RBP26.14■■□□□ 1.77
PVT1-220ENST00000524165 ADGRB1O14514 1584 aa26.12■■□□□ 1.77
PVT1-220ENST00000524165 PPARGC1BQ86YN6 1023 aaKnown RBP26.12■■□□□ 1.77
PVT1-220ENST00000524165 FHDC1Q9C0D6 1143 aaPredicted RBP26.12■■□□□ 1.77
PVT1-220ENST00000524165 CPDO75976 1380 aa26.11■■□□□ 1.77
PVT1-220ENST00000524165 BCL11BQ9C0K0 894 aaPredicted RBP26.1■■□□□ 1.77
PVT1-220ENST00000524165 CEP350Q5VT06 3117 aa26.1■■□□□ 1.77
PVT1-220ENST00000524165 ATF5Q9Y2D1 282 aaPredicted RBP26.09■■□□□ 1.77
PVT1-220ENST00000524165 TRAK1Q9UPV9 953 aa26.08■■□□□ 1.77
PVT1-220ENST00000524165 NUTM2GQ5VZR2 741 aa26.07■■□□□ 1.76
PVT1-220ENST00000524165 MPHOSPH9Q99550 1183 aa26.07■■□□□ 1.76
PVT1-220ENST00000524165 LRRC37A3O60309 1634 aa26.06■■□□□ 1.76
PVT1-220ENST00000524165 PROM2Q8N271 834 aa26.06■■□□□ 1.76
PVT1-220ENST00000524165 COL5A2P05997 1499 aaPredicted RBP26.04■■□□□ 1.76
PVT1-220ENST00000524165 MTFR1LQ9H019 292 aa26.04■■□□□ 1.76
PVT1-220ENST00000524165 CRB1P82279 1406 aa26.04■■□□□ 1.76
PVT1-220ENST00000524165 GIGYF1O75420 1035 aaPredicted RBP26.03■■□□□ 1.76
PVT1-220ENST00000524165 SGIP1Q9BQI5 828 aa26.03■■□□□ 1.76
PVT1-220ENST00000524165 STK32BQ9NY57 414 aa26.03■■□□□ 1.76
PVT1-220ENST00000524165 NUDT16Q96DE0 195 aaKnown RBP26.02■■□□□ 1.76
PVT1-220ENST00000524165 POLR3AO14802 1390 aaPredicted RBP26.02■■□□□ 1.76
PVT1-220ENST00000524165 BCL9O00512 1426 aa26.01■■□□□ 1.75
PVT1-220ENST00000524165 USP19O94966 1318 aa26.01■■□□□ 1.75
PVT1-220ENST00000524165 MAP3K5Q99683 1374 aa26.01■■□□□ 1.75
PVT1-220ENST00000524165 SLC15A2Q16348 729 aa26■■□□□ 1.75
PVT1-220ENST00000524165 DDB1Q16531 1140 aa26■■□□□ 1.75
PVT1-220ENST00000524165 PTF1AQ7RTS3 328 aa26■■□□□ 1.75
PVT1-220ENST00000524165 AKAP12Q02952 1782 aa26■■□□□ 1.75
PVT1-220ENST00000524165 TOPAZ1Q8N9V7 1692 aa25.99■■□□□ 1.75
PVT1-220ENST00000524165 ABTB2Q8N961 1025 aa25.98■■□□□ 1.75
PVT1-220ENST00000524165 WNK3Q9BYP7 1800 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms