RNA–Protein interactions for RNA: ENST00000522778.1

LINC01609-202, Transcript of long intergenic non-protein coding RNA 1609, humanhuman

TSL 2 BASIC

Gene LINC01609, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01609-202ENST00000522778 LYPD8Q6UX82 237 aa11.73□□□□□ -0.53
LINC01609-202ENST00000522778 J3QL48 77 aa11.72□□□□□ -0.53
LINC01609-202ENST00000522778 TUSC1Q2TAM9 212 aa11.72□□□□□ -0.53
LINC01609-202ENST00000522778 AXIN1O15169 862 aa11.71□□□□□ -0.53
LINC01609-202ENST00000522778 LILRB3O75022 631 aa11.71□□□□□ -0.53
LINC01609-202ENST00000522778 AVPP01185 164 aa11.71□□□□□ -0.53
LINC01609-202ENST00000522778 SMPD1P17405 629 aa11.71□□□□□ -0.53
LINC01609-202ENST00000522778 SH3BP2P78314 561 aa11.71□□□□□ -0.53
LINC01609-202ENST00000522778 BAP1Q92560 729 aa11.71□□□□□ -0.53
LINC01609-202ENST00000522778 ALDH1A1P00352 501 aa11.7□□□□□ -0.54
LINC01609-202ENST00000522778 MAP10Q9P2G4 905 aa11.7□□□□□ -0.54
LINC01609-202ENST00000522778 ATP1B4Q9UN42 357 aaPredicted RBP11.7□□□□□ -0.54
LINC01609-202ENST00000522778 CTC1Q2NKJ3 1217 aa11.69□□□□□ -0.54
LINC01609-202ENST00000522778 HELBQ8NG08 1087 aaPredicted RBP11.69□□□□□ -0.54
LINC01609-202ENST00000522778 DDRGK1Q96HY6 314 aa11.69□□□□□ -0.54
LINC01609-202ENST00000522778 FAM117AQ9C073 453 aa11.69□□□□□ -0.54
LINC01609-202ENST00000522778 CRIPAKQ8N1N5 446 aa11.68□□□□□ -0.54
LINC01609-202ENST00000522778 ZNF511Q8NB15 262 aa11.68□□□□□ -0.54
LINC01609-202ENST00000522778 PER1O15534 1290 aaPredicted RBP11.67□□□□□ -0.54
LINC01609-202ENST00000522778 RTL5Q5HYW3 569 aaPredicted RBP11.67□□□□□ -0.54
LINC01609-202ENST00000522778 F12P00748 615 aaPredicted RBP11.66□□□□□ -0.54
LINC01609-202ENST00000522778 CUX2O14529 1486 aa11.65□□□□□ -0.54
LINC01609-202ENST00000522778 POTECB2RU33 542 aa11.65□□□□□ -0.54
LINC01609-202ENST00000522778 HPS1Q92902 700 aa11.65□□□□□ -0.54
LINC01609-202ENST00000522778 DACH1Q9UI36 760 aa11.65□□□□□ -0.54
LINC01609-202ENST00000522778 SKIV2LQ15477 1246 aaKnown RBP11.64□□□□□ -0.55
LINC01609-202ENST00000522778 SH3D19Q5HYK7 790 aa11.64□□□□□ -0.55
LINC01609-202ENST00000522778 WASF2Q9Y6W5 498 aa11.64□□□□□ -0.55
LINC01609-202ENST00000522778 SIAH2O43255 324 aa11.63□□□□□ -0.55
LINC01609-202ENST00000522778 SMCPP49901 116 aaPredicted RBP11.63□□□□□ -0.55
LINC01609-202ENST00000522778 TLL2Q9Y6L7 1015 aa11.63□□□□□ -0.55
LINC01609-202ENST00000522778 PLEKHG3A1L390 1219 aa11.61□□□□□ -0.55
LINC01609-202ENST00000522778 VARSP26640 1264 aaKnown RBP11.61□□□□□ -0.55
LINC01609-202ENST00000522778 AGERQ15109 404 aa11.61□□□□□ -0.55
LINC01609-202ENST00000522778 EIF4G1Q04637 1599 aaKnown RBP11.6□□□□□ -0.55
LINC01609-202ENST00000522778 NEUROD2Q15784 382 aa11.6□□□□□ -0.55
LINC01609-202ENST00000522778 PROCA1Q8NCQ7 364 aaPredicted RBP11.6□□□□□ -0.55
LINC01609-202ENST00000522778 GMPR2Q9P2T1 348 aaKnown RBP11.59□□□□□ -0.55
LINC01609-202ENST00000522778 FOXJ1Q92949 421 aa11.58□□□□□ -0.56
LINC01609-202ENST00000522778 CTDSPL2Q05D32 466 aa11.57□□□□□ -0.56
LINC01609-202ENST00000522778 ARMC2Q8NEN0 867 aa11.57□□□□□ -0.56
LINC01609-202ENST00000522778 FAM174AQ8TBP5 190 aa11.57□□□□□ -0.56
LINC01609-202ENST00000522778 ATP13A2Q9NQ11 1180 aa11.56□□□□□ -0.56
LINC01609-202ENST00000522778 C11orf95C9JLR9 678 aaPredicted RBP11.55□□□□□ -0.56
LINC01609-202ENST00000522778 NBPF14Q5TI25 921 aa11.55□□□□□ -0.56
LINC01609-202ENST00000522778 BPHLQ86WA6 291 aaPredicted RBP11.55□□□□□ -0.56
LINC01609-202ENST00000522778 ZNF775Q96BV0 537 aaPredicted RBP11.55□□□□□ -0.56
LINC01609-202ENST00000522778 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.55□□□□□ -0.56
LINC01609-202ENST00000522778 ARID5BQ14865 1188 aa11.54□□□□□ -0.56
LINC01609-202ENST00000522778 FBXO31Q5XUX0 539 aaPredicted RBP11.54□□□□□ -0.56
LINC01609-202ENST00000522778 AP1G2O75843 785 aa11.52□□□□□ -0.57
LINC01609-202ENST00000522778 NNTQ13423 1086 aa11.52□□□□□ -0.57
LINC01609-202ENST00000522778 TPRNQ4KMQ1 711 aa11.52□□□□□ -0.57
LINC01609-202ENST00000522778 LRRN4Q8WUT4 740 aa11.52□□□□□ -0.57
LINC01609-202ENST00000522778 C4orf48Q5BLP8 95 aa11.51□□□□□ -0.57
LINC01609-202ENST00000522778 PPP2R2DQ66LE6 453 aa11.51□□□□□ -0.57
LINC01609-202ENST00000522778 MAGEB6P1A0A0J9YX57 407 aa11.5□□□□□ -0.57
LINC01609-202ENST00000522778 CAPN5O15484 640 aaPredicted RBP11.5□□□□□ -0.57
LINC01609-202ENST00000522778 MPNDQ8N594 471 aa11.5□□□□□ -0.57
LINC01609-202ENST00000522778 ADH1CP00326 375 aa11.49□□□□□ -0.57
LINC01609-202ENST00000522778 IL27Q8NEV9 243 aa11.49□□□□□ -0.57
LINC01609-202ENST00000522778 SENP2Q9HC62 589 aa11.49□□□□□ -0.57
LINC01609-202ENST00000522778 BMP1P13497 986 aa11.48□□□□□ -0.57
LINC01609-202ENST00000522778 PCMTD1Q96MG8 357 aaPredicted RBP11.48□□□□□ -0.57
LINC01609-202ENST00000522778 CARD14Q9BXL6 1004 aa11.48□□□□□ -0.57
LINC01609-202ENST00000522778 ERCC6Q03468 1493 aa11.48□□□□□ -0.57
LINC01609-202ENST00000522778 BRPF1P55201 1214 aaPredicted RBP11.47□□□□□ -0.57
LINC01609-202ENST00000522778 NR6A1Q15406 480 aa11.47□□□□□ -0.57
LINC01609-202ENST00000522778 SH3BP5LQ7L8J4 393 aa11.46□□□□□ -0.57
LINC01609-202ENST00000522778 SH3RF1Q7Z6J0 888 aa11.46□□□□□ -0.57
LINC01609-202ENST00000522778 GPKOWQ92917 476 aaPredicted RBP eCLIP11.46□□□□□ -0.57
LINC01609-202ENST00000522778 TRIM47Q96LD4 638 aa11.46□□□□□ -0.57
LINC01609-202ENST00000522778 CDK15Q96Q40 435 aa11.46□□□□□ -0.57
LINC01609-202ENST00000522778 SNRPBP14678 240 aaKnown RBP11.45□□□□□ -0.58
LINC01609-202ENST00000522778 WDR4P57081 412 aaKnown RBP11.45□□□□□ -0.58
LINC01609-202ENST00000522778 GOPCQ9HD26 462 aa11.45□□□□□ -0.58
LINC01609-202ENST00000522778 FKBPLQ9UIM3 349 aa11.45□□□□□ -0.58
LINC01609-202ENST00000522778 SHROOM4Q9ULL8 1493 aa11.44□□□□□ -0.58
LINC01609-202ENST00000522778 USP17L8P0C7I0 530 aa11.44□□□□□ -0.58
LINC01609-202ENST00000522778 RFC5P40937 340 aa11.44□□□□□ -0.58
LINC01609-202ENST00000522778 KIFC2Q96AC6 838 aa11.44□□□□□ -0.58
LINC01609-202ENST00000522778 C1QTNF2Q9BXJ5 285 aa11.43□□□□□ -0.58
LINC01609-202ENST00000522778 FSHRP23945 695 aa11.42□□□□□ -0.58
LINC01609-202ENST00000522778 NR5A1Q13285 461 aa11.42□□□□□ -0.58
LINC01609-202ENST00000522778 VASH1Q7L8A9 365 aaPredicted RBP11.42□□□□□ -0.58
LINC01609-202ENST00000522778 TRIM46Q7Z4K8 759 aa11.42□□□□□ -0.58
LINC01609-202ENST00000522778 NR3C2P08235 984 aa11.41□□□□□ -0.58
LINC01609-202ENST00000522778 TIMP2P16035 220 aa11.41□□□□□ -0.58
LINC01609-202ENST00000522778 ARHGAP9Q9BRR9 750 aa11.41□□□□□ -0.58
LINC01609-202ENST00000522778 HMX1Q9NP08 348 aaPredicted RBP11.41□□□□□ -0.58
LINC01609-202ENST00000522778 GRM5P41594 1212 aa11.4□□□□□ -0.58
LINC01609-202ENST00000522778 PDXDC2PQ6P474 469 aa11.4□□□□□ -0.58
LINC01609-202ENST00000522778 TRMT44Q8IYL2 757 aaKnown RBP11.4□□□□□ -0.58
LINC01609-202ENST00000522778 ZC3H4Q9UPT8 1303 aaKnown RBP11.39□□□□□ -0.59
LINC01609-202ENST00000522778 ZIC2O95409 532 aaPredicted RBP11.39□□□□□ -0.59
LINC01609-202ENST00000522778 ERFEQ4G0M1 354 aa11.39□□□□□ -0.59
LINC01609-202ENST00000522778 PNMA1Q8ND90 353 aa11.39□□□□□ -0.59
LINC01609-202ENST00000522778 EPS8L1Q8TE68 723 aa11.39□□□□□ -0.59
LINC01609-202ENST00000522778 ZBTB33Q86T24 672 aa11.38□□□□□ -0.59
LINC01609-202ENST00000522778 SLC10A4Q96EP9 437 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms