RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 PDE3BQ13370 1112 aa16.86■□□□□ 0.29
CTNNA1-234ENST00000522227 PRDM11Q9NQV5 511 aa16.86■□□□□ 0.29
CTNNA1-234ENST00000522227 ZBTB7AO95365 584 aa16.85■□□□□ 0.29
CTNNA1-234ENST00000522227 CHRNA2Q15822 529 aa16.85■□□□□ 0.29
CTNNA1-234ENST00000522227 PDGFDQ9GZP0 370 aaPredicted RBP16.85■□□□□ 0.29
CTNNA1-234ENST00000522227 SPATA31A1Q5TZJ5 1347 aa16.85■□□□□ 0.29
CTNNA1-234ENST00000522227 NRXN1Q9ULB1 1477 aa16.85■□□□□ 0.29
CTNNA1-234ENST00000522227 NRKQ7Z2Y5 1582 aa16.85■□□□□ 0.29
CTNNA1-234ENST00000522227 PPLO60437 1756 aa16.84■□□□□ 0.29
CTNNA1-234ENST00000522227 ATF5Q9Y2D1 282 aaPredicted RBP16.84■□□□□ 0.29
CTNNA1-234ENST00000522227 IFT172Q9UG01 1749 aa16.83■□□□□ 0.28
CTNNA1-234ENST00000522227 TECPR2O15040 1411 aa16.82■□□□□ 0.28
CTNNA1-234ENST00000522227 ABCC11Q96J66 1382 aa16.82■□□□□ 0.28
CTNNA1-234ENST00000522227 RGL3Q3MIN7 710 aa16.82■□□□□ 0.28
CTNNA1-234ENST00000522227 RRBP1Q9P2E9 1410 aaKnown RBP16.81■□□□□ 0.28
CTNNA1-234ENST00000522227 PAK3O75914 559 aaPredicted RBP16.81■□□□□ 0.28
CTNNA1-234ENST00000522227 ANO8Q9HCE9 1232 aaPredicted RBP16.81■□□□□ 0.28
CTNNA1-234ENST00000522227 GIGYF1O75420 1035 aaPredicted RBP16.8■□□□□ 0.28
CTNNA1-234ENST00000522227 FHDC1Q9C0D6 1143 aaPredicted RBP16.8■□□□□ 0.28
CTNNA1-234ENST00000522227 MYOM1P52179 1685 aa16.79■□□□□ 0.28
CTNNA1-234ENST00000522227 EVA1CP58658 441 aa16.78■□□□□ 0.28
CTNNA1-234ENST00000522227 SYT17Q9BSW7 474 aa16.78■□□□□ 0.28
CTNNA1-234ENST00000522227 ZC3H6P61129 1189 aaKnown RBP16.77■□□□□ 0.28
CTNNA1-234ENST00000522227 BCL11BQ9C0K0 894 aaPredicted RBP16.77■□□□□ 0.28
CTNNA1-234ENST00000522227 YTHDC2Q9H6S0 1430 aaKnown RBP16.77■□□□□ 0.27
CTNNA1-234ENST00000522227 GPRASP1Q5JY77 1395 aa16.77■□□□□ 0.27
CTNNA1-234ENST00000522227 KIAA0232Q92628 1395 aa16.77■□□□□ 0.27
CTNNA1-234ENST00000522227 KNDC1Q76NI1 1749 aa16.76■□□□□ 0.27
CTNNA1-234ENST00000522227 PTGER2P43116 358 aa16.76■□□□□ 0.27
CTNNA1-234ENST00000522227 CHD4Q14839 1912 aa16.75■□□□□ 0.27
CTNNA1-234ENST00000522227 TRPM3Q9HCF6 1732 aaPredicted RBP16.75■□□□□ 0.27
CTNNA1-234ENST00000522227 NUTM2GQ5VZR2 741 aa16.74■□□□□ 0.27
CTNNA1-234ENST00000522227 PRAM1Q96QH2 718 aa16.74■□□□□ 0.27
CTNNA1-234ENST00000522227 ALS2Q96Q42 1657 aa16.74■□□□□ 0.27
CTNNA1-234ENST00000522227 CASZ1Q86V15 1759 aa16.74■□□□□ 0.27
CTNNA1-234ENST00000522227 ACIN1Q9UKV3 1341 aaKnown RBP16.73■□□□□ 0.27
CTNNA1-234ENST00000522227 LARP1Q6PKG0 1096 aaKnown RBP16.73■□□□□ 0.27
CTNNA1-234ENST00000522227 HIRIP3Q9BW71 556 aaPredicted RBP16.73■□□□□ 0.27
CTNNA1-234ENST00000522227 BARGINQ6ZT62 677 aa16.72■□□□□ 0.27
CTNNA1-234ENST00000522227 GPR162Q16538 588 aa16.71■□□□□ 0.27
CTNNA1-234ENST00000522227 PTF1AQ7RTS3 328 aa16.71■□□□□ 0.27
CTNNA1-234ENST00000522227 PELP1Q8IZL8 1130 aaKnown RBP16.71■□□□□ 0.27
CTNNA1-234ENST00000522227 NGDNQ8NEJ9 315 aaKnown RBP16.71■□□□□ 0.27
CTNNA1-234ENST00000522227 SLC4A1APQ9BWU0 796 aaKnown RBP16.71■□□□□ 0.27
CTNNA1-234ENST00000522227 POGKQ9P215 609 aa16.71■□□□□ 0.27
CTNNA1-234ENST00000522227 TCP11L2Q8N4U5 519 aa16.7■□□□□ 0.26
CTNNA1-234ENST00000522227 SSH2Q76I76 1423 aa16.7■□□□□ 0.26
CTNNA1-234ENST00000522227 PPARGC1BQ86YN6 1023 aaKnown RBP16.69■□□□□ 0.26
CTNNA1-234ENST00000522227 CRYBG1Q9Y4K1 1723 aa16.68■□□□□ 0.26
CTNNA1-234ENST00000522227 SIRT1Q96EB6 747 aa16.68■□□□□ 0.26
CTNNA1-234ENST00000522227 ANKARQ7Z5J8 1434 aa16.68■□□□□ 0.26
CTNNA1-234ENST00000522227 PRR36Q9H6K5 1346 aa16.68■□□□□ 0.26
CTNNA1-234ENST00000522227 PLSCR1O15162 318 aa16.67■□□□□ 0.26
CTNNA1-234ENST00000522227 KLHL34Q8N239 644 aa16.67■□□□□ 0.26
CTNNA1-234ENST00000522227 STK32BQ9NY57 414 aa16.67■□□□□ 0.26
CTNNA1-234ENST00000522227 MINK1Q8N4C8 1332 aaPredicted RBP16.67■□□□□ 0.26
CTNNA1-234ENST00000522227 ANKRD30BQ9BXX2 1392 aa16.66■□□□□ 0.26
CTNNA1-234ENST00000522227 UTRNP46939 3433 aa16.66■□□□□ 0.26
CTNNA1-234ENST00000522227 PIK3C2GO75747 1445 aa16.66■□□□□ 0.26
CTNNA1-234ENST00000522227 CFAP70Q5T0N1 1121 aa16.66■□□□□ 0.26
CTNNA1-234ENST00000522227 PROM2Q8N271 834 aa16.66■□□□□ 0.26
CTNNA1-234ENST00000522227 DHX57Q6P158 1386 aaKnown RBP16.65■□□□□ 0.26
CTNNA1-234ENST00000522227 ARXQ96QS3 562 aa16.65■□□□□ 0.26
CTNNA1-234ENST00000522227 CEP350Q5VT06 3117 aa16.65■□□□□ 0.26
CTNNA1-234ENST00000522227 DLC1Q96QB1 1528 aa16.65■□□□□ 0.26
CTNNA1-234ENST00000522227 OVOS2A0A0G2JMS6 1433 aa16.63■□□□□ 0.25
CTNNA1-234ENST00000522227 OVOS2A0A0J9YW53 1432 aa16.63■□□□□ 0.25
CTNNA1-234ENST00000522227 OVOS2Q6IE36 1432 aa16.63■□□□□ 0.25
CTNNA1-234ENST00000522227 ZBTB7CA1YPR0 619 aa16.63■□□□□ 0.25
CTNNA1-234ENST00000522227 MTFR1LQ9H019 292 aa16.63■□□□□ 0.25
CTNNA1-234ENST00000522227 SLC15A2Q16348 729 aa16.62■□□□□ 0.25
CTNNA1-234ENST00000522227 C14orf93Q9H972 538 aaKnown RBP16.62■□□□□ 0.25
CTNNA1-234ENST00000522227 PHRF1Q9P1Y6 1649 aaKnown RBP16.62■□□□□ 0.25
CTNNA1-234ENST00000522227 SGIP1Q9BQI5 828 aa16.61■□□□□ 0.25
CTNNA1-234ENST00000522227 TXNRD1Q16881 649 aa16.6■□□□□ 0.25
CTNNA1-234ENST00000522227 TRAK1Q9UPV9 953 aa16.6■□□□□ 0.25
CTNNA1-234ENST00000522227 SPATA31E1Q6ZUB1 1445 aa16.6■□□□□ 0.25
CTNNA1-234ENST00000522227 C11orf95C9JLR9 678 aaPredicted RBP16.59■□□□□ 0.25
CTNNA1-234ENST00000522227 THRAP3Q9Y2W1 955 aaKnown RBP16.59■□□□□ 0.25
CTNNA1-234ENST00000522227 DDB1Q16531 1140 aa16.58■□□□□ 0.24
CTNNA1-234ENST00000522227 PARP4Q9UKK3 1724 aaKnown RBP16.58■□□□□ 0.24
CTNNA1-234ENST00000522227 RGPD3A6NKT7 1758 aaPredicted RBP16.58■□□□□ 0.24
CTNNA1-234ENST00000522227 RGPD4Q7Z3J3 1758 aa16.58■□□□□ 0.24
CTNNA1-234ENST00000522227 SBF2Q86WG5 1849 aa16.58■□□□□ 0.24
CTNNA1-234ENST00000522227 PEAK1Q9H792 1746 aa16.57■□□□□ 0.24
CTNNA1-234ENST00000522227 SHANK3Q9BYB0 1731 aa16.56■□□□□ 0.24
CTNNA1-234ENST00000522227 TULP4Q9NRJ4 1543 aa16.56■□□□□ 0.24
CTNNA1-234ENST00000522227 WASLO00401 505 aaPredicted RBP16.56■□□□□ 0.24
CTNNA1-234ENST00000522227 EIF3AQ14152 1382 aaKnown RBP16.55■□□□□ 0.24
CTNNA1-234ENST00000522227 MARCH10Q8NA82 808 aaPredicted RBP16.54■□□□□ 0.24
CTNNA1-234ENST00000522227 CAPN15O75808 1086 aa16.53■□□□□ 0.24
CTNNA1-234ENST00000522227 ABTB2Q8N961 1025 aa16.53■□□□□ 0.24
CTNNA1-234ENST00000522227 ATP7BP35670 1465 aa16.53■□□□□ 0.24
CTNNA1-234ENST00000522227 LRRC37A3O60309 1634 aa16.52■□□□□ 0.24
CTNNA1-234ENST00000522227 HSPA6P17066 643 aa16.52■□□□□ 0.24
CTNNA1-234ENST00000522227 ZNF526Q8TF50 670 aaPredicted RBP16.52■□□□□ 0.24
CTNNA1-234ENST00000522227 NUDT16Q96DE0 195 aaKnown RBP16.52■□□□□ 0.24
CTNNA1-234ENST00000522227 COL5A2P05997 1499 aaPredicted RBP16.52■□□□□ 0.23
CTNNA1-234ENST00000522227 LMO7Q8WWI1 1683 aa16.52■□□□□ 0.23
CTNNA1-234ENST00000522227 CRB1P82279 1406 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms