RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 LILRB3O75022 631 aa11.4□□□□□ -0.58
PABPC1-216ENST00000520868 RTL5Q5HYW3 569 aaPredicted RBP11.39□□□□□ -0.59
PABPC1-216ENST00000520868 RC3H1Q5TC82 1133 aaKnown RBP11.39□□□□□ -0.59
PABPC1-216ENST00000520868 FBXO31Q5XUX0 539 aaPredicted RBP11.39□□□□□ -0.59
PABPC1-216ENST00000520868 UNC93B1Q9H1C4 597 aa11.39□□□□□ -0.59
PABPC1-216ENST00000520868 EVA1BQ9NVM1 165 aa11.39□□□□□ -0.59
PABPC1-216ENST00000520868 PLEKHG3A1L390 1219 aa11.38□□□□□ -0.59
PABPC1-216ENST00000520868 PER1O15534 1290 aaPredicted RBP11.38□□□□□ -0.59
PABPC1-216ENST00000520868 LINC01559Q495D7 138 aa11.38□□□□□ -0.59
PABPC1-216ENST00000520868 TTC24A2A3L6 582 aaPredicted RBP11.37□□□□□ -0.59
PABPC1-216ENST00000520868 J3QL48 77 aa11.37□□□□□ -0.59
PABPC1-216ENST00000520868 KCNH2Q12809 1159 aa11.37□□□□□ -0.59
PABPC1-216ENST00000520868 LYPD8Q6UX82 237 aa11.37□□□□□ -0.59
PABPC1-216ENST00000520868 TSC1Q92574 1164 aa11.37□□□□□ -0.59
PABPC1-216ENST00000520868 BRPF1P55201 1214 aaPredicted RBP11.36□□□□□ -0.59
PABPC1-216ENST00000520868 SH3BP2P78314 561 aa11.36□□□□□ -0.59
PABPC1-216ENST00000520868 HELBQ8NG08 1087 aaPredicted RBP11.36□□□□□ -0.59
PABPC1-216ENST00000520868 MAP10Q9P2G4 905 aa11.36□□□□□ -0.59
PABPC1-216ENST00000520868 ATP1B4Q9UN42 357 aaPredicted RBP11.36□□□□□ -0.59
PABPC1-216ENST00000520868 SMPD1P17405 629 aa11.35□□□□□ -0.59
PABPC1-216ENST00000520868 WNT7BP56706 349 aa11.35□□□□□ -0.59
PABPC1-216ENST00000520868 BAP1Q92560 729 aa11.35□□□□□ -0.59
PABPC1-216ENST00000520868 NCAPD3P42695 1498 aa11.35□□□□□ -0.59
PABPC1-216ENST00000520868 POTECB2RU33 542 aa11.34□□□□□ -0.59
PABPC1-216ENST00000520868 CTHP32929 405 aa11.34□□□□□ -0.59
PABPC1-216ENST00000520868 PROCA1Q8NCQ7 364 aaPredicted RBP11.34□□□□□ -0.59
PABPC1-216ENST00000520868 SNIP1Q8TAD8 396 aaKnown RBP11.34□□□□□ -0.59
PABPC1-216ENST00000520868 AAASQ9NRG9 546 aa11.34□□□□□ -0.59
PABPC1-216ENST00000520868 ERCC6Q03468 1493 aa11.33□□□□□ -0.6
PABPC1-216ENST00000520868 GOPCQ9HD26 462 aa11.33□□□□□ -0.6
PABPC1-216ENST00000520868 DACH1Q9UI36 760 aa11.33□□□□□ -0.6
PABPC1-216ENST00000520868 F12P00748 615 aaPredicted RBP11.32□□□□□ -0.6
PABPC1-216ENST00000520868 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.31□□□□□ -0.6
PABPC1-216ENST00000520868 ATAD2BQ9ULI0 1458 aa11.31□□□□□ -0.6
PABPC1-216ENST00000520868 ZNF787Q6DD87 383 aa11.3□□□□□ -0.6
PABPC1-216ENST00000520868 EHBP1Q8NDI1 1231 aa11.3□□□□□ -0.6
PABPC1-216ENST00000520868 IL27Q8NEV9 243 aa11.3□□□□□ -0.6
PABPC1-216ENST00000520868 CUX2O14529 1486 aa11.3□□□□□ -0.6
PABPC1-216ENST00000520868 SIAH2O43255 324 aa11.29□□□□□ -0.6
PABPC1-216ENST00000520868 AVPP01185 164 aa11.29□□□□□ -0.6
PABPC1-216ENST00000520868 PPP2R2DQ66LE6 453 aa11.29□□□□□ -0.6
PABPC1-216ENST00000520868 ZNF511Q8NB15 262 aa11.29□□□□□ -0.6
PABPC1-216ENST00000520868 HPS1Q92902 700 aa11.29□□□□□ -0.6
PABPC1-216ENST00000520868 PCMTD1Q96MG8 357 aaPredicted RBP11.29□□□□□ -0.6
PABPC1-216ENST00000520868 ALDH1A1P00352 501 aa11.27□□□□□ -0.61
PABPC1-216ENST00000520868 TLL2Q9Y6L7 1015 aa11.27□□□□□ -0.61
PABPC1-216ENST00000520868 CTDSPL2Q05D32 466 aa11.26□□□□□ -0.61
PABPC1-216ENST00000520868 FOXJ1Q92949 421 aa11.26□□□□□ -0.61
PABPC1-216ENST00000520868 AXIN1O15169 862 aa11.25□□□□□ -0.61
PABPC1-216ENST00000520868 CRIPAKQ8N1N5 446 aa11.24□□□□□ -0.61
PABPC1-216ENST00000520868 ARMC2Q8NEN0 867 aa11.24□□□□□ -0.61
PABPC1-216ENST00000520868 NESP48681 1621 aa11.24□□□□□ -0.61
PABPC1-216ENST00000520868 PRKCSHP14314 528 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-216ENST00000520868 SMARCA2P51531 1590 aa11.23□□□□□ -0.61
PABPC1-216ENST00000520868 SMARCA4P51532 1647 aa11.23□□□□□ -0.61
PABPC1-216ENST00000520868 C4orf48Q5BLP8 95 aa11.22□□□□□ -0.61
PABPC1-216ENST00000520868 LRRN4Q8WUT4 740 aa11.22□□□□□ -0.61
PABPC1-216ENST00000520868 GMPR2Q9P2T1 348 aaKnown RBP11.21□□□□□ -0.61
PABPC1-216ENST00000520868 SMCPP49901 116 aaPredicted RBP11.2□□□□□ -0.62
PABPC1-216ENST00000520868 HMGXB3Q12766 1538 aa11.19□□□□□ -0.62
PABPC1-216ENST00000520868 AP1G2O75843 785 aa11.19□□□□□ -0.62
PABPC1-216ENST00000520868 VARSP26640 1264 aaKnown RBP11.19□□□□□ -0.62
PABPC1-216ENST00000520868 CTC1Q2NKJ3 1217 aa11.19□□□□□ -0.62
PABPC1-216ENST00000520868 BAZ1BQ9UIG0 1483 aaKnown RBP11.19□□□□□ -0.62
PABPC1-216ENST00000520868 RFC5P40937 340 aa11.18□□□□□ -0.62
PABPC1-216ENST00000520868 NBPF14Q5TI25 921 aa11.18□□□□□ -0.62
PABPC1-216ENST00000520868 GPKOWQ92917 476 aaPredicted RBP eCLIP11.17□□□□□ -0.62
PABPC1-216ENST00000520868 WASF2Q9Y6W5 498 aa11.17□□□□□ -0.62
PABPC1-216ENST00000520868 TMEM259Q4ZIN3 620 aa11.16□□□□□ -0.62
PABPC1-216ENST00000520868 BPHLQ86WA6 291 aaPredicted RBP11.16□□□□□ -0.62
PABPC1-216ENST00000520868 BAZ1AQ9NRL2 1556 aaPredicted RBP11.16□□□□□ -0.62
PABPC1-216ENST00000520868 AGERQ15109 404 aa11.15□□□□□ -0.62
PABPC1-216ENST00000520868 ZNF775Q96BV0 537 aaPredicted RBP11.15□□□□□ -0.62
PABPC1-216ENST00000520868 ATP13A2Q9NQ11 1180 aa11.15□□□□□ -0.62
PABPC1-216ENST00000520868 USP17L8P0C7I0 530 aa11.14□□□□□ -0.63
PABPC1-216ENST00000520868 NR6A1Q15406 480 aa11.14□□□□□ -0.63
PABPC1-216ENST00000520868 FAM174AQ8TBP5 190 aa11.14□□□□□ -0.63
PABPC1-216ENST00000520868 EPS8L1Q8TE68 723 aa11.14□□□□□ -0.63
PABPC1-216ENST00000520868 ARID5BQ14865 1188 aa11.13□□□□□ -0.63
PABPC1-216ENST00000520868 MPNDQ8N594 471 aa11.13□□□□□ -0.63
PABPC1-216ENST00000520868 PNMA1Q8ND90 353 aa11.13□□□□□ -0.63
PABPC1-216ENST00000520868 HMX1Q9NP08 348 aaPredicted RBP11.13□□□□□ -0.63
PABPC1-216ENST00000520868 ZC3H4Q9UPT8 1303 aaKnown RBP11.11□□□□□ -0.63
PABPC1-216ENST00000520868 BMP1P13497 986 aa11.11□□□□□ -0.63
PABPC1-216ENST00000520868 NNTQ13423 1086 aa11.11□□□□□ -0.63
PABPC1-216ENST00000520868 SH3BP5LQ7L8J4 393 aa11.11□□□□□ -0.63
PABPC1-216ENST00000520868 SH3RF1Q7Z6J0 888 aa11.11□□□□□ -0.63
PABPC1-216ENST00000520868 MROH2BQ7Z745 1585 aa11.11□□□□□ -0.63
PABPC1-216ENST00000520868 FKBPLQ9UIM3 349 aa11.1□□□□□ -0.63
PABPC1-216ENST00000520868 MAGEB6P1A0A0J9YX57 407 aa11.09□□□□□ -0.63
PABPC1-216ENST00000520868 PDXDC2PQ6P474 469 aa11.09□□□□□ -0.63
PABPC1-216ENST00000520868 CDK15Q96Q40 435 aa11.09□□□□□ -0.63
PABPC1-216ENST00000520868 C1QTNF2Q9BXJ5 285 aa11.09□□□□□ -0.63
PABPC1-216ENST00000520868 CARD14Q9BXL6 1004 aa11.09□□□□□ -0.63
PABPC1-216ENST00000520868 PEG3Q9GZU2 1588 aa11.08□□□□□ -0.64
PABPC1-216ENST00000520868 C11orf95C9JLR9 678 aaPredicted RBP11.08□□□□□ -0.64
PABPC1-216ENST00000520868 CAPN5O15484 640 aaPredicted RBP11.08□□□□□ -0.64
PABPC1-216ENST00000520868 SNRPBP14678 240 aaKnown RBP11.08□□□□□ -0.64
PABPC1-216ENST00000520868 TRIM46Q7Z4K8 759 aa11.08□□□□□ -0.64
PABPC1-216ENST00000520868 ADH1CP00326 375 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms