RNA–Protein interactions for RNA: ENST00000520828.5

PTK2-223, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-223	ENST00000520828	PARD3	Q8TEW0	1356 aa		12.14	□□□□□ -0.47
PTK2-223	ENST00000520828	FAM196A	Q6ZSG2	479 aa		12.13	□□□□□ -0.47
PTK2-223	ENST00000520828	TNS1	Q9HBL0	1735 aa	Known RBP	12.13	□□□□□ -0.47
PTK2-223	ENST00000520828	IFT172	Q9UG01	1749 aa		12.13	□□□□□ -0.47
PTK2-223	ENST00000520828	COL14A1	Q05707	1796 aa	Known RBP	12.13	□□□□□ -0.47
PTK2-223	ENST00000520828	TRIM37	O94972	964 aa		12.12	□□□□□ -0.47
PTK2-223	ENST00000520828	APBA3	O96018	575 aa		12.12	□□□□□ -0.47
PTK2-223	ENST00000520828	PMFBP1	Q8TBY8	1022 aa		12.12	□□□□□ -0.47
PTK2-223	ENST00000520828	PPP1R1B	Q9UD71	204 aa	Predicted RBP	12.12	□□□□□ -0.47
PTK2-223	ENST00000520828	PIK3C2G	O75747	1445 aa		12.11	□□□□□ -0.47
PTK2-223	ENST00000520828	THSD7A	Q9UPZ6	1657 aa		12.11	□□□□□ -0.47
PTK2-223	ENST00000520828	NBPF8	Q3BBV2	869 aa		12.11	□□□□□ -0.47
PTK2-223	ENST00000520828	NBPF14	Q5TI25	921 aa		12.11	□□□□□ -0.47
PTK2-223	ENST00000520828	PPARGC1B	Q86YN6	1023 aa	Known RBP	12.11	□□□□□ -0.47
PTK2-223	ENST00000520828	SPATA31E1	Q6ZUB1	1445 aa		12.11	□□□□□ -0.47
PTK2-223	ENST00000520828	RGPD8	O14715	1765 aa	Predicted RBP	12.1	□□□□□ -0.47
PTK2-223	ENST00000520828	GPRASP1	Q5JY77	1395 aa		12.1	□□□□□ -0.47
PTK2-223	ENST00000520828	SAFB2	Q14151	953 aa	Known RBP eCLIP	12.1	□□□□□ -0.47
PTK2-223	ENST00000520828	PRDM11	Q9NQV5	511 aa		12.1	□□□□□ -0.47
PTK2-223	ENST00000520828	ANKAR	Q7Z5J8	1434 aa		12.1	□□□□□ -0.47
PTK2-223	ENST00000520828	DHX57	Q6P158	1386 aa	Known RBP	12.09	□□□□□ -0.47
PTK2-223	ENST00000520828	PRAM1	Q96QH2	718 aa		12.09	□□□□□ -0.47
PTK2-223	ENST00000520828	C14orf93	Q9H972	538 aa	Known RBP	12.08	□□□□□ -0.48
PTK2-223	ENST00000520828	SPON1	Q9HCB6	807 aa		12.08	□□□□□ -0.48
PTK2-223	ENST00000520828	POGK	Q9P215	609 aa		12.08	□□□□□ -0.48
PTK2-223	ENST00000520828	SPATA31A1	Q5TZJ5	1347 aa		12.08	□□□□□ -0.48
PTK2-223	ENST00000520828	NINL	Q9Y2I6	1382 aa		12.07	□□□□□ -0.48
PTK2-223	ENST00000520828	KCNA4	P22459	653 aa		12.07	□□□□□ -0.48
PTK2-223	ENST00000520828	ACIN1	Q9UKV3	1341 aa	Known RBP	12.07	□□□□□ -0.48
PTK2-223	ENST00000520828	TRPM3	Q9HCF6	1732 aa	Predicted RBP	12.06	□□□□□ -0.48
PTK2-223	ENST00000520828	KCNQ2	O43526	872 aa		12.06	□□□□□ -0.48
PTK2-223	ENST00000520828	PAK3	O75914	559 aa	Predicted RBP	12.06	□□□□□ -0.48
PTK2-223	ENST00000520828	PDE3B	Q13370	1112 aa		12.06	□□□□□ -0.48
PTK2-223	ENST00000520828	STRN4	Q9NRL3	753 aa		12.06	□□□□□ -0.48
PTK2-223	ENST00000520828	ALS2	Q96Q42	1657 aa		12.06	□□□□□ -0.48
PTK2-223	ENST00000520828	CFAP70	Q5T0N1	1121 aa		12.05	□□□□□ -0.48
PTK2-223	ENST00000520828	EIF3A	Q14152	1382 aa	Known RBP	12.05	□□□□□ -0.48
PTK2-223	ENST00000520828	RREB1	Q92766	1687 aa		12.04	□□□□□ -0.48
PTK2-223	ENST00000520828	NGDN	Q8NEJ9	315 aa	Known RBP	12.04	□□□□□ -0.48
PTK2-223	ENST00000520828	USP35	Q9P2H5	1018 aa		12.04	□□□□□ -0.48
PTK2-223	ENST00000520828	KIAA0232	Q92628	1395 aa		12.04	□□□□□ -0.48
PTK2-223	ENST00000520828	NUP188	Q5SRE5	1749 aa		12.03	□□□□□ -0.48
PTK2-223	ENST00000520828	EVA1C	P58658	441 aa		12.03	□□□□□ -0.48
PTK2-223	ENST00000520828	CHRNA2	Q15822	529 aa		12.03	□□□□□ -0.48
PTK2-223	ENST00000520828	HIRIP3	Q9BW71	556 aa	Predicted RBP	12.03	□□□□□ -0.48
PTK2-223	ENST00000520828	DLC1	Q96QB1	1528 aa		12.02	□□□□□ -0.48
PTK2-223	ENST00000520828	BARGIN	Q6ZT62	677 aa		12.02	□□□□□ -0.49
PTK2-223	ENST00000520828	CRYBG1	Q9Y4K1	1723 aa		12.01	□□□□□ -0.49
PTK2-223	ENST00000520828	PRR36	Q9H6K5	1346 aa		12.01	□□□□□ -0.49
PTK2-223	ENST00000520828	TULP4	Q9NRJ4	1543 aa		12.01	□□□□□ -0.49
PTK2-223	ENST00000520828	MPHOSPH9	Q99550	1183 aa		12	□□□□□ -0.49
PTK2-223	ENST00000520828	MINK1	Q8N4C8	1332 aa	Predicted RBP	12	□□□□□ -0.49
PTK2-223	ENST00000520828	C11orf95	C9JLR9	678 aa	Predicted RBP	11.99	□□□□□ -0.49
PTK2-223	ENST00000520828	WASL	O00401	505 aa	Predicted RBP	11.99	□□□□□ -0.49
PTK2-223	ENST00000520828	ZC3H6	P61129	1189 aa	Known RBP	11.99	□□□□□ -0.49
PTK2-223	ENST00000520828	TCP11L2	Q8N4U5	519 aa		11.99	□□□□□ -0.49
PTK2-223	ENST00000520828	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.99	□□□□□ -0.49
PTK2-223	ENST00000520828	SSH2	Q76I76	1423 aa		11.99	□□□□□ -0.49
PTK2-223	ENST00000520828	SENP3-EIF4A1	A0A087X0R7	540 aa		11.98	□□□□□ -0.49
PTK2-223	ENST00000520828	TRAK1	Q9UPV9	953 aa		11.98	□□□□□ -0.49
PTK2-223	ENST00000520828	CAMTA1	Q9Y6Y1	1673 aa		11.97	□□□□□ -0.49
PTK2-223	ENST00000520828	ATP7B	P35670	1465 aa		11.97	□□□□□ -0.49
PTK2-223	ENST00000520828	LARP1	Q6PKG0	1096 aa	Known RBP	11.97	□□□□□ -0.49
PTK2-223	ENST00000520828	THRAP3	Q9Y2W1	955 aa	Known RBP	11.97	□□□□□ -0.49
PTK2-223	ENST00000520828		U3KPZ7	1027 aa	Predicted RBP	11.97	□□□□□ -0.49
PTK2-223	ENST00000520828	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.97	□□□□□ -0.49
PTK2-223	ENST00000520828	NUTM2G	Q5VZR2	741 aa		11.96	□□□□□ -0.49
PTK2-223	ENST00000520828	ADGRB1	O14514	1584 aa		11.95	□□□□□ -0.5
PTK2-223	ENST00000520828	NRK	Q7Z2Y5	1582 aa		11.95	□□□□□ -0.5
PTK2-223	ENST00000520828	OVOS2	A0A0G2JMS6	1433 aa		11.94	□□□□□ -0.5
PTK2-223	ENST00000520828	OVOS2	A0A0J9YW53	1432 aa		11.94	□□□□□ -0.5
PTK2-223	ENST00000520828	OVOS2	Q6IE36	1432 aa		11.94	□□□□□ -0.5
PTK2-223	ENST00000520828	PLSCR1	O15162	318 aa		11.94	□□□□□ -0.5
PTK2-223	ENST00000520828	ZBTB7A	O95365	584 aa		11.94	□□□□□ -0.5
PTK2-223	ENST00000520828	C1QTNF8	P60827	252 aa		11.94	□□□□□ -0.5
PTK2-223	ENST00000520828	NUDT16	Q96DE0	195 aa	Known RBP	11.94	□□□□□ -0.5
PTK2-223	ENST00000520828	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.94	□□□□□ -0.5
PTK2-223	ENST00000520828	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.94	□□□□□ -0.5
PTK2-223	ENST00000520828	CPD	O75976	1380 aa		11.93	□□□□□ -0.5
PTK2-223	ENST00000520828	IFFO2	Q5TF58	517 aa		11.93	□□□□□ -0.5
PTK2-223	ENST00000520828	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.92	□□□□□ -0.5
PTK2-223	ENST00000520828	RGPD4	Q7Z3J3	1758 aa		11.92	□□□□□ -0.5
PTK2-223	ENST00000520828	CASZ1	Q86V15	1759 aa		11.92	□□□□□ -0.5
PTK2-223	ENST00000520828	ITSN1	Q15811	1721 aa		11.91	□□□□□ -0.5
PTK2-223	ENST00000520828	PARP4	Q9UKK3	1724 aa	Known RBP	11.91	□□□□□ -0.5
PTK2-223	ENST00000520828	PTGER2	P43116	358 aa		11.91	□□□□□ -0.5
PTK2-223	ENST00000520828	ABTB2	Q8N961	1025 aa		11.91	□□□□□ -0.5
PTK2-223	ENST00000520828	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.91	□□□□□ -0.5
PTK2-223	ENST00000520828	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.91	□□□□□ -0.5
PTK2-223	ENST00000520828	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.91	□□□□□ -0.5
PTK2-223	ENST00000520828	ACE	P12821	1306 aa		11.9	□□□□□ -0.5
PTK2-223	ENST00000520828	CRB1	P82279	1406 aa		11.9	□□□□□ -0.5
PTK2-223	ENST00000520828	DDB1	Q16531	1140 aa		11.9	□□□□□ -0.5
PTK2-223	ENST00000520828	SYT17	Q9BSW7	474 aa		11.9	□□□□□ -0.5
PTK2-223	ENST00000520828	STK32B	Q9NY57	414 aa		11.9	□□□□□ -0.5
PTK2-223	ENST00000520828	MYOM1	P52179	1685 aa		11.9	□□□□□ -0.5
PTK2-223	ENST00000520828	LMO7	Q8WWI1	1683 aa		11.9	□□□□□ -0.5
PTK2-223	ENST00000520828	POLR3A	O14802	1390 aa	Predicted RBP	11.9	□□□□□ -0.5
PTK2-223	ENST00000520828	COL5A2	P05997	1499 aa	Predicted RBP	11.89	□□□□□ -0.51
PTK2-223	ENST00000520828	PEAK1	Q9H792	1746 aa		11.89	□□□□□ -0.51

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