RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 WNT2BQ93097 391 aa9.46□□□□□ -0.9
HMGB1P46-201ENST00000520062 TFIP11Q9UBB9 837 aaKnown RBP9.46□□□□□ -0.9
HMGB1P46-201ENST00000520062 AEBP1Q8IUX7 1158 aa9.45□□□□□ -0.9
HMGB1P46-201ENST00000520062 MAFBQ9Y5Q3 323 aaPredicted RBP9.45□□□□□ -0.9
HMGB1P46-201ENST00000520062 FBXO45P0C2W1 286 aa9.44□□□□□ -0.9
HMGB1P46-201ENST00000520062 LMOD1P29536 600 aaPredicted RBP9.44□□□□□ -0.9
HMGB1P46-201ENST00000520062 ZNF592Q92610 1267 aa9.44□□□□□ -0.9
HMGB1P46-201ENST00000520062 ATP9BO43861 1147 aa9.43□□□□□ -0.9
HMGB1P46-201ENST00000520062 ANKRD13DQ6ZTN6 518 aa9.43□□□□□ -0.9
HMGB1P46-201ENST00000520062 NFATC2IPQ8NCF5 419 aa9.43□□□□□ -0.9
HMGB1P46-201ENST00000520062 ARMC2Q8NEN0 867 aa9.43□□□□□ -0.9
HMGB1P46-201ENST00000520062 GPKOWQ92917 476 aaPredicted RBP eCLIP9.43□□□□□ -0.9
HMGB1P46-201ENST00000520062 GPSM3Q9Y4H4 160 aa9.43□□□□□ -0.9
HMGB1P46-201ENST00000520062 DXOO77932 396 aaKnown RBP9.42□□□□□ -0.9
HMGB1P46-201ENST00000520062 ATG7O95352 703 aa9.42□□□□□ -0.9
HMGB1P46-201ENST00000520062 BRD1O95696 1058 aa9.41□□□□□ -0.9
HMGB1P46-201ENST00000520062 CCNYL3P0C7X3 344 aa9.41□□□□□ -0.9
HMGB1P46-201ENST00000520062 MAP10Q9P2G4 905 aa9.41□□□□□ -0.9
HMGB1P46-201ENST00000520062 MMP16P51512 607 aa9.4□□□□□ -0.9
HMGB1P46-201ENST00000520062 TBC1D9Q6ZT07 1266 aa9.4□□□□□ -0.9
HMGB1P46-201ENST00000520062 NYAP1Q6ZVC0 841 aa9.4□□□□□ -0.9
HMGB1P46-201ENST00000520062 EVA1BQ9NVM1 165 aa9.4□□□□□ -0.9
HMGB1P46-201ENST00000520062 MCCD1P59942 119 aaPredicted RBP9.39□□□□□ -0.91
HMGB1P46-201ENST00000520062 KCNA1Q09470 495 aa9.39□□□□□ -0.91
HMGB1P46-201ENST00000520062 LCE2DQ5TA82 110 aaPredicted RBP9.39□□□□□ -0.91
HMGB1P46-201ENST00000520062 PDXDC2PQ6P474 469 aa9.39□□□□□ -0.91
HMGB1P46-201ENST00000520062 SPSB2Q99619 263 aa9.39□□□□□ -0.91
HMGB1P46-201ENST00000520062 WBP1LQ9NX94 342 aa9.39□□□□□ -0.91
HMGB1P46-201ENST00000520062 CTHP32929 405 aa9.38□□□□□ -0.91
HMGB1P46-201ENST00000520062 KCNH2Q12809 1159 aa9.38□□□□□ -0.91
HMGB1P46-201ENST00000520062 FAM160A2Q8N612 972 aaPredicted RBP9.38□□□□□ -0.91
HMGB1P46-201ENST00000520062 NUDT12Q9BQG2 462 aa9.38□□□□□ -0.91
HMGB1P46-201ENST00000520062 PTK2Q05397 1052 aa9.37□□□□□ -0.91
HMGB1P46-201ENST00000520062 NBPF14Q5TI25 921 aa9.37□□□□□ -0.91
HMGB1P46-201ENST00000520062 PLEKHM2Q8IWE5 1019 aa9.37□□□□□ -0.91
HMGB1P46-201ENST00000520062 ELOAQ14241 798 aaKnown RBP9.36□□□□□ -0.91
HMGB1P46-201ENST00000520062 THSD4Q6ZMP0 1018 aa9.36□□□□□ -0.91
HMGB1P46-201ENST00000520062 VRTNQ9H8Y1 702 aa9.36□□□□□ -0.91
HMGB1P46-201ENST00000520062 RANGAP1P46060 587 aaPredicted RBP9.35□□□□□ -0.91
HMGB1P46-201ENST00000520062 KANK4Q5T7N3 995 aaPredicted RBP9.34□□□□□ -0.91
HMGB1P46-201ENST00000520062 USP17L3A6NCW0 530 aa9.33□□□□□ -0.92
HMGB1P46-201ENST00000520062 USP17L4A6NCW7 530 aa9.33□□□□□ -0.92
HMGB1P46-201ENST00000520062 TMEM88BA6NKF7 163 aa9.33□□□□□ -0.92
HMGB1P46-201ENST00000520062 PIK3CDO00329 1044 aa9.33□□□□□ -0.92
HMGB1P46-201ENST00000520062 ADH1BP00325 375 aa9.33□□□□□ -0.92
HMGB1P46-201ENST00000520062 COPS2P61201 443 aa9.33□□□□□ -0.92
HMGB1P46-201ENST00000520062 USP17L2Q6R6M4 530 aa9.33□□□□□ -0.92
HMGB1P46-201ENST00000520062 USP17L1Q7RTZ2 530 aa9.33□□□□□ -0.92
HMGB1P46-201ENST00000520062 USP17L5A8MUK1 530 aa9.32□□□□□ -0.92
HMGB1P46-201ENST00000520062 LZTS3O60299 673 aaPredicted RBP9.32□□□□□ -0.92
HMGB1P46-201ENST00000520062 ZPR1O75312 459 aa9.32□□□□□ -0.92
HMGB1P46-201ENST00000520062 SKIP12755 728 aa9.32□□□□□ -0.92
HMGB1P46-201ENST00000520062 TMCO4Q5TGY1 634 aa9.32□□□□□ -0.92
HMGB1P46-201ENST00000520062 NPM2Q86SE8 214 aaKnown RBP9.32□□□□□ -0.92
HMGB1P46-201ENST00000520062 GZF1Q9H116 711 aaPredicted RBP9.32□□□□□ -0.92
HMGB1P46-201ENST00000520062 CEP126Q9P2H0 1117 aa9.32□□□□□ -0.92
HMGB1P46-201ENST00000520062 CDCA8Q53HL2 280 aa9.31□□□□□ -0.92
HMGB1P46-201ENST00000520062 B4GALNT3Q6L9W6 998 aa9.31□□□□□ -0.92
HMGB1P46-201ENST00000520062 PRDM9Q9NQV7 894 aa9.31□□□□□ -0.92
HMGB1P46-201ENST00000520062 SLFNL1Q499Z3 407 aa9.3□□□□□ -0.92
HMGB1P46-201ENST00000520062 OCSTAMPQ9BR26 566 aa9.3□□□□□ -0.92
HMGB1P46-201ENST00000520062 MYT1LQ9UL68 1186 aa9.3□□□□□ -0.92
HMGB1P46-201ENST00000520062 FAM196BA6NMK8 535 aa9.29□□□□□ -0.92
HMGB1P46-201ENST00000520062 PHTF2Q8N3S3 785 aa9.29□□□□□ -0.92
HMGB1P46-201ENST00000520062 FAM174AQ8TBP5 190 aa9.29□□□□□ -0.92
HMGB1P46-201ENST00000520062 ARHGAP9Q9BRR9 750 aa9.29□□□□□ -0.92
HMGB1P46-201ENST00000520062 MAP7D1Q3KQU3 841 aa9.28□□□□□ -0.92
HMGB1P46-201ENST00000520062 SH3BP5LQ7L8J4 393 aa9.28□□□□□ -0.92
HMGB1P46-201ENST00000520062 RNF135Q8IUD6 432 aa9.28□□□□□ -0.92
HMGB1P46-201ENST00000520062 ADAM32Q8TC27 787 aa9.28□□□□□ -0.92
HMGB1P46-201ENST00000520062 MTRQ99707 1265 aa9.28□□□□□ -0.92
HMGB1P46-201ENST00000520062 UNC93B1Q9H1C4 597 aa9.28□□□□□ -0.92
HMGB1P46-201ENST00000520062 CHIC2Q9UKJ5 165 aa9.28□□□□□ -0.92
HMGB1P46-201ENST00000520062 PCDHB9Q9Y5E1 797 aa9.28□□□□□ -0.92
HMGB1P46-201ENST00000520062 TLL1O43897 1013 aa9.27□□□□□ -0.93
HMGB1P46-201ENST00000520062 KCTD12Q96CX2 325 aaKnown RBP9.27□□□□□ -0.93
HMGB1P46-201ENST00000520062 KRTAP3-3Q9BYR6 98 aa9.27□□□□□ -0.93
HMGB1P46-201ENST00000520062 KRTAP3-2Q9BYR7 98 aa9.27□□□□□ -0.93
HMGB1P46-201ENST00000520062 ATP5J2-PTCD1G3V325 749 aa9.26□□□□□ -0.93
HMGB1P46-201ENST00000520062 ZBTB33Q86T24 672 aa9.26□□□□□ -0.93
HMGB1P46-201ENST00000520062 PLPP7Q8NBV4 271 aa9.26□□□□□ -0.93
HMGB1P46-201ENST00000520062 SLC6A16Q9GZN6 736 aa9.26□□□□□ -0.93
HMGB1P46-201ENST00000520062 IL21Q9HBE4 155 aa9.26□□□□□ -0.93
HMGB1P46-201ENST00000520062 ZMIZ1Q9ULJ6 1067 aa9.26□□□□□ -0.93
HMGB1P46-201ENST00000520062 NOVA2Q9UNW9 492 aaKnown RBP9.26□□□□□ -0.93
HMGB1P46-201ENST00000520062 CARNS1A5YM72 827 aa9.25□□□□□ -0.93
HMGB1P46-201ENST00000520062 MKRN1Q9UHC7 482 aaKnown RBP9.25□□□□□ -0.93
HMGB1P46-201ENST00000520062 USP17L15C9J2P7 530 aa9.24□□□□□ -0.93
HMGB1P46-201ENST00000520062 USP17L10C9JJH3 530 aa9.24□□□□□ -0.93
HMGB1P46-201ENST00000520062 USP17L13C9JLJ4 530 aa9.24□□□□□ -0.93
HMGB1P46-201ENST00000520062 USP17L12C9JPN9 530 aa9.24□□□□□ -0.93
HMGB1P46-201ENST00000520062 USP17L11C9JVI0 530 aa9.24□□□□□ -0.93
HMGB1P46-201ENST00000520062 USP17L21D6R901 530 aa9.24□□□□□ -0.93
HMGB1P46-201ENST00000520062 USP17L18D6R9N7 530 aa9.24□□□□□ -0.93
HMGB1P46-201ENST00000520062 USP17L22D6RA61 530 aa9.24□□□□□ -0.93
HMGB1P46-201ENST00000520062 USP17L17D6RBQ6 530 aa9.24□□□□□ -0.93
HMGB1P46-201ENST00000520062 USP17L19D6RCP7 530 aa9.24□□□□□ -0.93
HMGB1P46-201ENST00000520062 USP17L20D6RJB6 530 aa9.24□□□□□ -0.93
HMGB1P46-201ENST00000520062 MFAP1P55081 439 aaKnown RBP9.24□□□□□ -0.93
HMGB1P46-201ENST00000520062 USP17L24Q0WX57 530 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms