RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 MON2Q7Z3U7 1717 aa16.22■□□□□ 0.19
SPIDR-212ENST00000519661 MARF1Q9Y4F3 1742 aaKnown RBP16.22■□□□□ 0.19
SPIDR-212ENST00000519661 USP54Q70EL1 1684 aa16.21■□□□□ 0.19
SPIDR-212ENST00000519661 TMF1P82094 1093 aa16.21■□□□□ 0.19
SPIDR-212ENST00000519661 CDCA8Q53HL2 280 aa16.21■□□□□ 0.19
SPIDR-212ENST00000519661 TTC21AQ8NDW8 1320 aa16.2■□□□□ 0.18
SPIDR-212ENST00000519661 EIF4G2P78344 907 aaKnown RBP eCLIP16.2■□□□□ 0.183e-7■■□□□ 12.5
SPIDR-212ENST00000519661 ZNF772Q68DY9 489 aaPredicted RBP16.2■□□□□ 0.18
SPIDR-212ENST00000519661 SLIT3O75094 1523 aa16.19■□□□□ 0.18
SPIDR-212ENST00000519661 BCL9LQ86UU0 1499 aa16.19■□□□□ 0.18
SPIDR-212ENST00000519661 CDK12Q9NYV4 1490 aaPredicted RBP16.19■□□□□ 0.18
SPIDR-212ENST00000519661 CPDO75976 1380 aa16.19■□□□□ 0.18
SPIDR-212ENST00000519661 USP31Q70CQ4 1352 aa16.19■□□□□ 0.18
SPIDR-212ENST00000519661 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.19■□□□□ 0.18
SPIDR-212ENST00000519661 EDC4Q6P2E9 1401 aaKnown RBP16.19■□□□□ 0.18
SPIDR-212ENST00000519661 PHF23Q9BUL5 403 aaPredicted RBP16.18■□□□□ 0.18
SPIDR-212ENST00000519661 PIK3C2AO00443 1686 aa16.18■□□□□ 0.18
SPIDR-212ENST00000519661 A0A1W2PP64 1363 aa16.17■□□□□ 0.18
SPIDR-212ENST00000519661 ANKRD36BQ8N2N9 1353 aa16.17■□□□□ 0.18
SPIDR-212ENST00000519661 PHRF1Q9P1Y6 1649 aaKnown RBP16.17■□□□□ 0.18
SPIDR-212ENST00000519661 AFF2P51816 1311 aa16.17■□□□□ 0.18
SPIDR-212ENST00000519661 TTC21BQ7Z4L5 1316 aa16.17■□□□□ 0.18
SPIDR-212ENST00000519661 KTN1Q86UP2 1357 aaKnown RBP16.16■□□□□ 0.18
SPIDR-212ENST00000519661 NUTM2BA6NNL0 878 aaPredicted RBP16.16■□□□□ 0.18
SPIDR-212ENST00000519661 NUTM2EB1AL46 878 aaPredicted RBP16.16■□□□□ 0.18
SPIDR-212ENST00000519661 POTEAQ6S8J7 498 aa16.16■□□□□ 0.18
SPIDR-212ENST00000519661 NUTM2AQ8IVF1 878 aaPredicted RBP16.16■□□□□ 0.18
SPIDR-212ENST00000519661 TERF2IPQ9NYB0 399 aa16.16■□□□□ 0.18
SPIDR-212ENST00000519661 NWD2Q9ULI1 1742 aa16.16■□□□□ 0.18
SPIDR-212ENST00000519661 ATRNO75882 1429 aa16.15■□□□□ 0.18
SPIDR-212ENST00000519661 SLC12A5Q9H2X9 1139 aa16.15■□□□□ 0.18
SPIDR-212ENST00000519661 MYOM1P52179 1685 aa16.14■□□□□ 0.18
SPIDR-212ENST00000519661 HSPA5P11021 654 aaKnown RBP16.14■□□□□ 0.17
SPIDR-212ENST00000519661 MEX3CQ5U5Q3 659 aaKnown RBP16.14■□□□□ 0.17
SPIDR-212ENST00000519661 NLRP13Q86W25 1043 aa16.14■□□□□ 0.17
SPIDR-212ENST00000519661 ABCC6O95255 1503 aa16.14■□□□□ 0.17
SPIDR-212ENST00000519661 COL14A1Q05707 1796 aaKnown RBP16.13■□□□□ 0.17
SPIDR-212ENST00000519661 ADAMTS2O95450 1211 aa16.13■□□□□ 0.17
SPIDR-212ENST00000519661 ILDR2Q71H61 639 aa16.13■□□□□ 0.17
SPIDR-212ENST00000519661 ABTB2Q8N961 1025 aa16.13■□□□□ 0.17
SPIDR-212ENST00000519661 OVOS2A0A0J9YW53 1432 aa16.12■□□□□ 0.17
SPIDR-212ENST00000519661 OVOS2Q6IE36 1432 aa16.12■□□□□ 0.17
SPIDR-212ENST00000519661 HDGFL2Q7Z4V5 671 aaPredicted RBP16.12■□□□□ 0.17
SPIDR-212ENST00000519661 CABLES1Q8TDN4 633 aa16.12■□□□□ 0.17
SPIDR-212ENST00000519661 NGLY1Q96IV0 654 aa16.12■□□□□ 0.17
SPIDR-212ENST00000519661 C8orf37Q96NL8 207 aa16.12■□□□□ 0.17
SPIDR-212ENST00000519661 LMO7Q8WWI1 1683 aa16.11■□□□□ 0.17
SPIDR-212ENST00000519661 PAK3O75914 559 aaPredicted RBP16.11■□□□□ 0.17
SPIDR-212ENST00000519661 NFAT5O94916 1531 aa16.1■□□□□ 0.17
SPIDR-212ENST00000519661 FAM83GA6ND36 823 aa16.1■□□□□ 0.17
SPIDR-212ENST00000519661 GCP02774 474 aa16.1■□□□□ 0.17
SPIDR-212ENST00000519661 UNC5CLQ8IV45 518 aa16.1■□□□□ 0.17
SPIDR-212ENST00000519661 PLCH1Q4KWH8 1693 aa16.1■□□□□ 0.17
SPIDR-212ENST00000519661 NRAPQ86VF7 1730 aa16.1■□□□□ 0.17
SPIDR-212ENST00000519661 LMOD2Q6P5Q4 547 aa16.09■□□□□ 0.17
SPIDR-212ENST00000519661 USP21Q9UK80 565 aa16.09■□□□□ 0.17
SPIDR-212ENST00000519661 TRPC5Q9UL62 973 aaPredicted RBP16.09■□□□□ 0.17
SPIDR-212ENST00000519661 KIAA0232Q92628 1395 aa16.09■□□□□ 0.17
SPIDR-212ENST00000519661 AATKQ6ZMQ8 1374 aa16.08■□□□□ 0.16
SPIDR-212ENST00000519661 NLRP6P59044 892 aa16.07■□□□□ 0.16
SPIDR-212ENST00000519661 RBM6P78332 1123 aaKnown RBP16.07■□□□□ 0.16
SPIDR-212ENST00000519661 VPS72Q15906 364 aa16.07■□□□□ 0.16
SPIDR-212ENST00000519661 KCNH5Q8NCM2 988 aa16.07■□□□□ 0.16
SPIDR-212ENST00000519661 TMC1Q8TDI8 760 aa16.07■□□□□ 0.16
SPIDR-212ENST00000519661 ONECUT3O60422 494 aaPredicted RBP16.06■□□□□ 0.16
SPIDR-212ENST00000519661 QTRT2Q9H974 415 aaKnown RBP16.06■□□□□ 0.16
SPIDR-212ENST00000519661 ARHGEF25Q86VW2 580 aa16.05■□□□□ 0.16
SPIDR-212ENST00000519661 COL18A1P39060 1754 aa16.05■□□□□ 0.16
SPIDR-212ENST00000519661 GLI3P10071 1580 aa16.04■□□□□ 0.16
SPIDR-212ENST00000519661 C11orf95C9JLR9 678 aaPredicted RBP16.04■□□□□ 0.16
SPIDR-212ENST00000519661 RXRBP28702 533 aa16.04■□□□□ 0.16
SPIDR-212ENST00000519661 HAP1P54257 671 aaPredicted RBP16.04■□□□□ 0.16
SPIDR-212ENST00000519661 CARD14Q9BXL6 1004 aa16.04■□□□□ 0.16
SPIDR-212ENST00000519661 PRDM11Q9NQV5 511 aa16.04■□□□□ 0.16
SPIDR-212ENST00000519661 CAMTA1Q9Y6Y1 1673 aa16.04■□□□□ 0.16
SPIDR-212ENST00000519661 NME9Q86XW9 330 aa16.03■□□□□ 0.16
SPIDR-212ENST00000519661 GJD4Q96KN9 370 aaPredicted RBP16.03■□□□□ 0.16
SPIDR-212ENST00000519661 FYB1O15117 783 aa16.02■□□□□ 0.16
SPIDR-212ENST00000519661 NUTM2GQ5VZR2 741 aa16.02■□□□□ 0.16
SPIDR-212ENST00000519661 COL5A2P05997 1499 aaPredicted RBP16.02■□□□□ 0.15
SPIDR-212ENST00000519661 RGS12O14924 1447 aa16.02■□□□□ 0.15
SPIDR-212ENST00000519661 KIF7Q2M1P5 1343 aa16.01■□□□□ 0.15
SPIDR-212ENST00000519661 SOCS7O14512 581 aa16.01■□□□□ 0.15
SPIDR-212ENST00000519661 BTG4Q9NY30 223 aa16.01■□□□□ 0.15
SPIDR-212ENST00000519661 SPATA31A5Q5VU36 1347 aa16■□□□□ 0.15
SPIDR-212ENST00000519661 SPATA31A7Q8IWB4 1347 aa16■□□□□ 0.15
SPIDR-212ENST00000519661 KIF24Q5T7B8 1368 aa16■□□□□ 0.15
SPIDR-212ENST00000519661 ZC3H6P61129 1189 aaKnown RBP15.99■□□□□ 0.15
SPIDR-212ENST00000519661 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.99■□□□□ 0.153e-6■■■□□ 16.7
SPIDR-212ENST00000519661 NSD3Q9BZ95 1437 aa15.99■□□□□ 0.15
SPIDR-212ENST00000519661 NSD2O96028 1365 aa15.99■□□□□ 0.15
SPIDR-212ENST00000519661 ZRANB1Q9UGI0 708 aa15.98■□□□□ 0.15
SPIDR-212ENST00000519661 BLMP54132 1417 aaPredicted RBP15.97■□□□□ 0.15
SPIDR-212ENST00000519661 THSD7AQ9UPZ6 1657 aa15.97■□□□□ 0.15
SPIDR-212ENST00000519661 RTL1A6NKG5 1358 aa15.97■□□□□ 0.15
SPIDR-212ENST00000519661 CCDC7Q96M83 1385 aa15.97■□□□□ 0.15
SPIDR-212ENST00000519661 CGNL1Q0VF96 1302 aa15.96■□□□□ 0.15
SPIDR-212ENST00000519661 SPATA31A1Q5TZJ5 1347 aa15.96■□□□□ 0.15
SPIDR-212ENST00000519661 COG3Q96JB2 828 aa15.96■□□□□ 0.15
SPIDR-212ENST00000519661 WASHC2AQ641Q2 1341 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms