RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 MAPK8IP2Q13387 824 aaPredicted RBP16.62■□□□□ 0.25
PABPC1-208ENST00000519004 DNAJC2Q99543 621 aaKnown RBP16.62■□□□□ 0.25
PABPC1-208ENST00000519004 CFAP74Q9C0B2 1584 aa16.62■□□□□ 0.25
PABPC1-208ENST00000519004 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
PABPC1-208ENST00000519004 CTIFO43310 598 aaKnown RBP16.61■□□□□ 0.25
PABPC1-208ENST00000519004 DZIP1LQ8IYY4 767 aaKnown RBP16.61■□□□□ 0.25
PABPC1-208ENST00000519004 MPNDQ8N594 471 aa16.61■□□□□ 0.25
PABPC1-208ENST00000519004 RIOK3O14730 519 aaKnown RBP16.61■□□□□ 0.25
PABPC1-208ENST00000519004 NUCB1Q02818 461 aa16.61■□□□□ 0.25
PABPC1-208ENST00000519004 BMP2KLQ5H9B9 411 aa16.61■□□□□ 0.25
PABPC1-208ENST00000519004 ADCY10Q96PN6 1610 aa16.61■□□□□ 0.25
PABPC1-208ENST00000519004 EIF2AK4Q9P2K8 1649 aaKnown RBP16.6■□□□□ 0.25
PABPC1-208ENST00000519004 ZKSCAN2Q63HK3 967 aa16.6■□□□□ 0.25
PABPC1-208ENST00000519004 TTC12Q9H892 705 aaPredicted RBP16.6■□□□□ 0.25
PABPC1-208ENST00000519004 RGL3Q3MIN7 710 aa16.59■□□□□ 0.25
PABPC1-208ENST00000519004 CDCA8Q53HL2 280 aa16.59■□□□□ 0.25
PABPC1-208ENST00000519004 ZFP91Q96JP5 570 aaPredicted RBP16.59■□□□□ 0.25
PABPC1-208ENST00000519004 TSPY26PQ9H489 355 aa16.59■□□□□ 0.25
PABPC1-208ENST00000519004 PHF23Q9BUL5 403 aaPredicted RBP16.59■□□□□ 0.25
PABPC1-208ENST00000519004 CFDP1Q9UEE9 299 aaPredicted RBP16.59■□□□□ 0.25
PABPC1-208ENST00000519004 ZDHHC9Q9Y397 364 aa16.59■□□□□ 0.25
PABPC1-208ENST00000519004 FANCD2Q9BXW9 1451 aa16.58■□□□□ 0.25
PABPC1-208ENST00000519004 CCDC66A2RUB6 948 aa16.58■□□□□ 0.25
PABPC1-208ENST00000519004 TBC1D9Q6ZT07 1266 aa16.58■□□□□ 0.25
PABPC1-208ENST00000519004 CHAMP1Q96JM3 812 aa16.58■□□□□ 0.25
PABPC1-208ENST00000519004 LNPKQ9C0E8 428 aa16.58■□□□□ 0.25
PABPC1-208ENST00000519004 RNF17Q9BXT8 1623 aaKnown RBP16.58■□□□□ 0.24
PABPC1-208ENST00000519004 IQSEC2Q5JU85 1478 aa16.58■□□□□ 0.24
PABPC1-208ENST00000519004 TIGD1Q96MW7 591 aa16.58■□□□□ 0.24
PABPC1-208ENST00000519004 DIAPH3Q9NSV4 1193 aa16.58■□□□□ 0.24
PABPC1-208ENST00000519004 CTNNA3Q9UI47 895 aa16.58■□□□□ 0.24
PABPC1-208ENST00000519004 CCDC141Q6ZP82 1450 aa16.58■□□□□ 0.24
PABPC1-208ENST00000519004 MYOM1P52179 1685 aa16.57■□□□□ 0.24
PABPC1-208ENST00000519004 TULP2O00295 520 aa16.57■□□□□ 0.24
PABPC1-208ENST00000519004 CAPN2P17655 700 aa16.57■□□□□ 0.24
PABPC1-208ENST00000519004 TEX2Q8IWB9 1127 aa16.57■□□□□ 0.24
PABPC1-208ENST00000519004 CHRM1P11229 460 aaPredicted RBP16.57■□□□□ 0.24
PABPC1-208ENST00000519004 IRX3P78415 501 aaPredicted RBP16.57■□□□□ 0.24
PABPC1-208ENST00000519004 CHMP4AQ9BY43 222 aa16.57■□□□□ 0.24
PABPC1-208ENST00000519004 RRP7AQ9Y3A4 280 aaKnown RBP16.57■□□□□ 0.24
PABPC1-208ENST00000519004 KANK1Q14678 1352 aa16.57■□□□□ 0.24
PABPC1-208ENST00000519004 NUP160Q12769 1436 aa16.56■□□□□ 0.24
PABPC1-208ENST00000519004 PBRM1Q86U86 1689 aa16.56■□□□□ 0.24
PABPC1-208ENST00000519004 NCBP1Q09161 790 aaKnown RBP16.56■□□□□ 0.24
PABPC1-208ENST00000519004 NEUROD2Q15784 382 aa16.56■□□□□ 0.24
PABPC1-208ENST00000519004 WDR63Q8IWG1 891 aa16.56■□□□□ 0.24
PABPC1-208ENST00000519004 MYO5CQ9NQX4 1742 aa16.56■□□□□ 0.24
PABPC1-208ENST00000519004 GPATCH8Q9UKJ3 1502 aaKnown RBP16.55■□□□□ 0.24
PABPC1-208ENST00000519004 MBD3O95983 291 aa16.55■□□□□ 0.24
PABPC1-208ENST00000519004 TERF2Q15554 542 aa16.55■□□□□ 0.24
PABPC1-208ENST00000519004 CHD1LQ86WJ1 897 aa16.55■□□□□ 0.24
PABPC1-208ENST00000519004 CWC22Q9HCG8 908 aaKnown RBP16.55■□□□□ 0.24
PABPC1-208ENST00000519004 DDX41Q9UJV9 622 aaKnown RBP16.55■□□□□ 0.24
PABPC1-208ENST00000519004 RABEP1Q15276 862 aa16.55■□□□□ 0.24
PABPC1-208ENST00000519004 DDX19BQ9UMR2 479 aa16.55■□□□□ 0.24
PABPC1-208ENST00000519004 TRIM27P14373 513 aa16.54■□□□□ 0.24
PABPC1-208ENST00000519004 ZGPATQ8N5A5 531 aaKnown RBP16.54■□□□□ 0.24
PABPC1-208ENST00000519004 RGS22Q8NE09 1264 aa16.54■□□□□ 0.24
PABPC1-208ENST00000519004 ITPRIPQ8IWB1 547 aa16.53■□□□□ 0.24
PABPC1-208ENST00000519004 USP25Q9UHP3 1055 aa16.53■□□□□ 0.24
PABPC1-208ENST00000519004 ZNF777Q9ULD5 760 aaPredicted RBP16.53■□□□□ 0.24
PABPC1-208ENST00000519004 CHAF1AQ13111 956 aaPredicted RBP16.53■□□□□ 0.24
PABPC1-208ENST00000519004 UVSSAQ2YD98 709 aa16.53■□□□□ 0.24
PABPC1-208ENST00000519004 MORC2Q9Y6X9 1032 aaPredicted RBP16.53■□□□□ 0.24
PABPC1-208ENST00000519004 SHPRHQ149N8 1683 aa16.52■□□□□ 0.24
PABPC1-208ENST00000519004 NUP153P49790 1475 aaKnown RBP16.52■□□□□ 0.24
PABPC1-208ENST00000519004 PLA2R1Q13018 1463 aa16.52■□□□□ 0.24
PABPC1-208ENST00000519004 POLR3AO14802 1390 aaPredicted RBP16.52■□□□□ 0.23
PABPC1-208ENST00000519004 SHANK2Q9UPX8 1470 aa16.52■□□□□ 0.23
PABPC1-208ENST00000519004 KIAA1524Q8TCG1 905 aa16.51■□□□□ 0.23
PABPC1-208ENST00000519004 ZBTB40Q9NUA8 1239 aa16.51■□□□□ 0.23
PABPC1-208ENST00000519004 IQGAP2Q13576 1575 aa16.51■□□□□ 0.23
PABPC1-208ENST00000519004 C9orf84Q5VXU9 1444 aa16.51■□□□□ 0.23
PABPC1-208ENST00000519004 ADCY5O95622 1261 aa16.51■□□□□ 0.23
PABPC1-208ENST00000519004 SYCP1Q15431 976 aa16.51■□□□□ 0.23
PABPC1-208ENST00000519004 CERS3Q8IU89 383 aa16.51■□□□□ 0.23
PABPC1-208ENST00000519004 TCP11L2Q8N4U5 519 aa16.51■□□□□ 0.23
PABPC1-208ENST00000519004 RUNDC1Q96C34 613 aa16.51■□□□□ 0.23
PABPC1-208ENST00000519004 TDRD9Q8NDG6 1382 aaKnown RBP16.5■□□□□ 0.23
PABPC1-208ENST00000519004 IQGAP1P46940 1657 aa16.5■□□□□ 0.23
PABPC1-208ENST00000519004 TRIM6-TRIM34B2RNG4 842 aa16.49■□□□□ 0.23
PABPC1-208ENST00000519004 TRIM34Q9BYJ4 488 aa16.49■□□□□ 0.23
PABPC1-208ENST00000519004 CALCOCO1Q9P1Z2 691 aa16.49■□□□□ 0.23
PABPC1-208ENST00000519004 PYCARDQ9ULZ3 195 aa16.49■□□□□ 0.23
PABPC1-208ENST00000519004 PRG4Q92954 1404 aaPredicted RBP16.49■□□□□ 0.23
PABPC1-208ENST00000519004 CDC42BPAQ5VT25 1732 aa16.49■□□□□ 0.23
PABPC1-208ENST00000519004 SYNJ2O15056 1496 aa16.49■□□□□ 0.23
PABPC1-208ENST00000519004 FAM184AQ8NB25 1140 aa16.49■□□□□ 0.23
PABPC1-208ENST00000519004 SECISBP2LQ93073 1101 aaKnown RBP16.49■□□□□ 0.23
PABPC1-208ENST00000519004 TROQ12816 1431 aaPredicted RBP16.48■□□□□ 0.23
PABPC1-208ENST00000519004 KCNF1Q9H3M0 494 aa16.48■□□□□ 0.23
PABPC1-208ENST00000519004 CCDC27Q2M243 656 aa16.47■□□□□ 0.23
PABPC1-208ENST00000519004 TMEM57Q8N5G2 664 aa16.47■□□□□ 0.23
PABPC1-208ENST00000519004 KIF18AQ8NI77 898 aa16.47■□□□□ 0.23
PABPC1-208ENST00000519004 SMC4Q9NTJ3 1288 aa16.47■□□□□ 0.23
PABPC1-208ENST00000519004 ANKRD36BQ8N2N9 1353 aa16.47■□□□□ 0.23
PABPC1-208ENST00000519004 ATF7IPQ6VMQ6 1270 aa16.47■□□□□ 0.23
PABPC1-208ENST00000519004 CDC45O75419 566 aa16.46■□□□□ 0.23
PABPC1-208ENST00000519004 SYAP1Q96A49 352 aaPredicted RBP16.46■□□□□ 0.23
PABPC1-208ENST00000519004 PLB1Q6P1J6 1458 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms