RNA–Protein interactions for RNA: ENST00000518098.1

LINCR-0001-202, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-202ENST00000518098 PLSCR1O15162 318 aa8.89□□□□□ -0.99
LINCR-0001-202ENST00000518098 EVA1CP58658 441 aa8.89□□□□□ -0.99
LINCR-0001-202ENST00000518098 IFFO2Q5TF58 517 aa8.89□□□□□ -0.99
LINCR-0001-202ENST00000518098 C14orf93Q9H972 538 aaKnown RBP8.89□□□□□ -0.99
LINCR-0001-202ENST00000518098 COL14A1Q05707 1796 aaKnown RBP8.89□□□□□ -0.99
LINCR-0001-202ENST00000518098 PIK3C2GO75747 1445 aa8.88□□□□□ -0.99
LINCR-0001-202ENST00000518098 ADGRF5Q8IZF2 1346 aa8.88□□□□□ -0.99
LINCR-0001-202ENST00000518098 NGDNQ8NEJ9 315 aaKnown RBP8.87□□□□□ -0.99
LINCR-0001-202ENST00000518098 FMN2Q9NZ56 1722 aa8.87□□□□□ -0.99
LINCR-0001-202ENST00000518098 BRWD3Q6RI45 1802 aa8.87□□□□□ -0.99
LINCR-0001-202ENST00000518098 KNDC1Q76NI1 1749 aa8.86□□□□□ -0.99
LINCR-0001-202ENST00000518098 PLCH1Q4KWH8 1693 aa8.86□□□□□ -0.99
LINCR-0001-202ENST00000518098 RGL3Q3MIN7 710 aa8.86□□□□□ -0.99
LINCR-0001-202ENST00000518098 TMEM132EQ6IEE7 984 aa8.86□□□□□ -0.99
LINCR-0001-202ENST00000518098 TCP11L2Q8N4U5 519 aa8.86□□□□□ -0.99
LINCR-0001-202ENST00000518098 PRAM1Q96QH2 718 aa8.86□□□□□ -0.99
LINCR-0001-202ENST00000518098 CDCA7Q9BWT1 371 aaPredicted RBP8.86□□□□□ -0.99
LINCR-0001-202ENST00000518098 SENP3-EIF4A1A0A087X0R7 540 aa8.85□□□□□ -0.99
LINCR-0001-202ENST00000518098 PAK3O75914 559 aaPredicted RBP8.85□□□□□ -0.99
LINCR-0001-202ENST00000518098 C1QTNF8P60827 252 aa8.85□□□□□ -0.99
LINCR-0001-202ENST00000518098 ZNF784Q8NCA9 323 aaPredicted RBP8.85□□□□□ -0.99
LINCR-0001-202ENST00000518098 PMFBP1Q8TBY8 1022 aa8.85□□□□□ -0.99
LINCR-0001-202ENST00000518098 SPATA31E1Q6ZUB1 1445 aa8.85□□□□□ -0.99
LINCR-0001-202ENST00000518098 PLEKHH1Q9ULM0 1364 aa8.85□□□□□ -0.99
LINCR-0001-202ENST00000518098 DLC1Q96QB1 1528 aa8.85□□□□□ -0.99
LINCR-0001-202ENST00000518098 ATP7BP35670 1465 aa8.84□□□□□ -0.99
LINCR-0001-202ENST00000518098 PPLO60437 1756 aa8.84□□□□□ -0.99
LINCR-0001-202ENST00000518098 THSD7AQ9UPZ6 1657 aa8.84□□□□□ -0.99
LINCR-0001-202ENST00000518098 BRD4O60885 1362 aaPredicted RBP8.84□□□□□ -0.99
LINCR-0001-202ENST00000518098 WASLO00401 505 aaPredicted RBP8.83□□□□□ -1
LINCR-0001-202ENST00000518098 HMGB2P26583 209 aaKnown RBP8.83□□□□□ -1
LINCR-0001-202ENST00000518098 BCL11BQ9C0K0 894 aaPredicted RBP8.83□□□□□ -1
LINCR-0001-202ENST00000518098 STRN4Q9NRL3 753 aa8.83□□□□□ -1
LINCR-0001-202ENST00000518098 OVOS2A0A0G2JMS6 1433 aa8.82□□□□□ -1
LINCR-0001-202ENST00000518098 OVOS2A0A0J9YW53 1432 aa8.82□□□□□ -1
LINCR-0001-202ENST00000518098 OVOS2Q6IE36 1432 aa8.82□□□□□ -1
LINCR-0001-202ENST00000518098 PLEKHG5O94827 1062 aa8.82□□□□□ -1
LINCR-0001-202ENST00000518098 FAM182BQ5T319 152 aa8.82□□□□□ -1
LINCR-0001-202ENST00000518098 CPDO75976 1380 aa8.82□□□□□ -1
LINCR-0001-202ENST00000518098 KIAA0232Q92628 1395 aa8.82□□□□□ -1
LINCR-0001-202ENST00000518098 NRAPQ86VF7 1730 aa8.81□□□□□ -1
LINCR-0001-202ENST00000518098 NLRP13Q86W25 1043 aa8.81□□□□□ -1
LINCR-0001-202ENST00000518098 MTFR1LQ9H019 292 aa8.81□□□□□ -1
LINCR-0001-202ENST00000518098 STK32BQ9NY57 414 aa8.81□□□□□ -1
LINCR-0001-202ENST00000518098 BCL9O00512 1426 aa8.8□□□□□ -1
LINCR-0001-202ENST00000518098 SSH2Q76I76 1423 aa8.8□□□□□ -1
LINCR-0001-202ENST00000518098 GIGYF1O75420 1035 aaPredicted RBP8.8□□□□□ -1
LINCR-0001-202ENST00000518098 USP35Q9P2H5 1018 aa8.8□□□□□ -1
LINCR-0001-202ENST00000518098 MAP3K5Q99683 1374 aa8.8□□□□□ -1
LINCR-0001-202ENST00000518098 TNS1Q9HBL0 1735 aaKnown RBP8.8□□□□□ -1
LINCR-0001-202ENST00000518098 TULP4Q9NRJ4 1543 aa8.8□□□□□ -1
LINCR-0001-202ENST00000518098 DDB1Q16531 1140 aa8.79□□□□□ -1
LINCR-0001-202ENST00000518098 CFAP70Q5T0N1 1121 aa8.79□□□□□ -1
LINCR-0001-202ENST00000518098 MPHOSPH9Q99550 1183 aa8.79□□□□□ -1
LINCR-0001-202ENST00000518098 SYT17Q9BSW7 474 aa8.79□□□□□ -1
LINCR-0001-202ENST00000518098 CCDC61Q9Y6R9 512 aa8.79□□□□□ -1
LINCR-0001-202ENST00000518098 ABCA3Q99758 1704 aa8.78□□□□□ -1
LINCR-0001-202ENST00000518098 ZC3H6P61129 1189 aaKnown RBP8.78□□□□□ -1
LINCR-0001-202ENST00000518098 SAFB2Q14151 953 aaKnown RBP eCLIP8.78□□□□□ -1
LINCR-0001-202ENST00000518098 ABTB2Q8N961 1025 aa8.78□□□□□ -1
LINCR-0001-202ENST00000518098 SLC16A10Q8TF71 515 aa8.78□□□□□ -1
LINCR-0001-202ENST00000518098 CRB1P82279 1406 aa8.78□□□□□ -1
LINCR-0001-202ENST00000518098 IFT172Q9UG01 1749 aa8.77□□□□□ -1
LINCR-0001-202ENST00000518098 AATKQ6ZMQ8 1374 aa8.77□□□□□ -1.01
LINCR-0001-202ENST00000518098 GRIN3BO60391 1043 aa8.77□□□□□ -1.01
LINCR-0001-202ENST00000518098 CHRNA2Q15822 529 aa8.77□□□□□ -1.01
LINCR-0001-202ENST00000518098 SLC15A2Q16348 729 aa8.77□□□□□ -1.01
LINCR-0001-202ENST00000518098 NUDT16Q96DE0 195 aaKnown RBP8.77□□□□□ -1.01
LINCR-0001-202ENST00000518098 RREB1Q92766 1687 aa8.77□□□□□ -1.01
LINCR-0001-202ENST00000518098 RGPD3A6NKT7 1758 aaPredicted RBP8.76□□□□□ -1.01
LINCR-0001-202ENST00000518098 RGPD4Q7Z3J3 1758 aa8.76□□□□□ -1.01
LINCR-0001-202ENST00000518098 UTRNP46939 3433 aa8.76□□□□□ -1.01
LINCR-0001-202ENST00000518098 POLR3AO14802 1390 aaPredicted RBP8.76□□□□□ -1.01
LINCR-0001-202ENST00000518098 ALS2Q96Q42 1657 aa8.76□□□□□ -1.01
LINCR-0001-202ENST00000518098 PLEKHG3A1L390 1219 aa8.76□□□□□ -1.01
LINCR-0001-202ENST00000518098 PTGER2P43116 358 aa8.76□□□□□ -1.01
LINCR-0001-202ENST00000518098 LARP1Q6PKG0 1096 aaKnown RBP8.76□□□□□ -1.01
LINCR-0001-202ENST00000518098 ARXQ96QS3 562 aa8.76□□□□□ -1.01
LINCR-0001-202ENST00000518098 FHDC1Q9C0D6 1143 aaPredicted RBP8.76□□□□□ -1.01
LINCR-0001-202ENST00000518098 TRAK1Q9UPV9 953 aa8.76□□□□□ -1.01
LINCR-0001-202ENST00000518098 TRPM3Q9HCF6 1732 aaPredicted RBP8.75□□□□□ -1.01
LINCR-0001-202ENST00000518098 GCP02774 474 aa8.75□□□□□ -1.01
LINCR-0001-202ENST00000518098 POLD1P28340 1107 aa8.75□□□□□ -1.01
LINCR-0001-202ENST00000518098 GPR162Q16538 588 aa8.75□□□□□ -1.01
LINCR-0001-202ENST00000518098 USP19O94966 1318 aa8.75□□□□□ -1.01
LINCR-0001-202ENST00000518098 MINK1Q8N4C8 1332 aaPredicted RBP8.75□□□□□ -1.01
LINCR-0001-202ENST00000518098 EXOC5O00471 708 aa8.74□□□□□ -1.01
LINCR-0001-202ENST00000518098 ZBTB7AO95365 584 aa8.74□□□□□ -1.01
LINCR-0001-202ENST00000518098 TXNRD1Q16881 649 aa8.74□□□□□ -1.01
LINCR-0001-202ENST00000518098 KCNH5Q8NCM2 988 aa8.74□□□□□ -1.01
LINCR-0001-202ENST00000518098 HIRIP3Q9BW71 556 aaPredicted RBP8.74□□□□□ -1.01
LINCR-0001-202ENST00000518098 PRR36Q9H6K5 1346 aa8.74□□□□□ -1.01
LINCR-0001-202ENST00000518098 NUP188Q5SRE5 1749 aa8.74□□□□□ -1.01
LINCR-0001-202ENST00000518098 TOM1L2Q6ZVM7 507 aa8.73□□□□□ -1.01
LINCR-0001-202ENST00000518098 ACEP12821 1306 aa8.73□□□□□ -1.01
LINCR-0001-202ENST00000518098 ATF5Q9Y2D1 282 aaPredicted RBP8.72□□□□□ -1.01
LINCR-0001-202ENST00000518098 WDR17Q8IZU2 1322 aa8.72□□□□□ -1.01
LINCR-0001-202ENST00000518098 CEP350Q5VT06 3117 aa8.71□□□□□ -1.01
LINCR-0001-202ENST00000518098 COL5A2P05997 1499 aaPredicted RBP8.71□□□□□ -1.01
LINCR-0001-202ENST00000518098 SGIP1Q9BQI5 828 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms