RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 NUTM2EB1AL46 878 aaPredicted RBP7.43□□□□□ -1.22
SCARNA16.4-201ENST00000516956 NUTM2GQ5VZR2 741 aa7.43□□□□□ -1.22
SCARNA16.4-201ENST00000516956 NUTM2AQ8IVF1 878 aaPredicted RBP7.43□□□□□ -1.22
SCARNA16.4-201ENST00000516956 COG3Q96JB2 828 aa7.43□□□□□ -1.22
SCARNA16.4-201ENST00000516956 SOS2Q07890 1332 aaPredicted RBP7.43□□□□□ -1.22
SCARNA16.4-201ENST00000516956 TTC21BQ7Z4L5 1316 aa7.43□□□□□ -1.22
SCARNA16.4-201ENST00000516956 PHLPP1O60346 1717 aa7.43□□□□□ -1.22
SCARNA16.4-201ENST00000516956 SBNO1A3KN83 1393 aa7.43□□□□□ -1.22
SCARNA16.4-201ENST00000516956 JCADQ9P266 1359 aa7.43□□□□□ -1.22
SCARNA16.4-201ENST00000516956 EDC4Q6P2E9 1401 aaKnown RBP7.43□□□□□ -1.22
SCARNA16.4-201ENST00000516956 USP32Q8NFA0 1604 aa7.42□□□□□ -1.22
SCARNA16.4-201ENST00000516956 RGPD8O14715 1765 aaPredicted RBP7.42□□□□□ -1.22
SCARNA16.4-201ENST00000516956 MORC1Q86VD1 984 aa7.42□□□□□ -1.22
SCARNA16.4-201ENST00000516956 SPATA31A3Q5VYP0 1347 aa7.42□□□□□ -1.22
SCARNA16.4-201ENST00000516956 A0A1W2PP64 1363 aa7.42□□□□□ -1.22
SCARNA16.4-201ENST00000516956 USP6P35125 1406 aa7.42□□□□□ -1.22
SCARNA16.4-201ENST00000516956 TNS3Q68CZ2 1445 aa7.42□□□□□ -1.22
SCARNA16.4-201ENST00000516956 NSD3Q9BZ95 1437 aa7.42□□□□□ -1.22
SCARNA16.4-201ENST00000516956 AHDC1Q5TGY3 1603 aaPredicted RBP7.41□□□□□ -1.22
SCARNA16.4-201ENST00000516956 SOX12O15370 315 aa7.41□□□□□ -1.22
SCARNA16.4-201ENST00000516956 KCNH5Q8NCM2 988 aa7.41□□□□□ -1.22
SCARNA16.4-201ENST00000516956 TOPAZ1Q8N9V7 1692 aa7.41□□□□□ -1.22
SCARNA16.4-201ENST00000516956 NME9Q86XW9 330 aa7.4□□□□□ -1.22
SCARNA16.4-201ENST00000516956 GGNBP2Q9H3C7 697 aa7.4□□□□□ -1.22
SCARNA16.4-201ENST00000516956 SPATA31A6Q5VVP1 1343 aa7.4□□□□□ -1.22
SCARNA16.4-201ENST00000516956 CPSF1Q10570 1443 aaKnown RBP7.4□□□□□ -1.22
SCARNA16.4-201ENST00000516956 NHSL1Q5SYE7 1610 aa7.39□□□□□ -1.23
SCARNA16.4-201ENST00000516956 PXDNQ92626 1479 aa7.39□□□□□ -1.23
SCARNA16.4-201ENST00000516956 ADAMTS2O95450 1211 aa7.39□□□□□ -1.23
SCARNA16.4-201ENST00000516956 CC2D1BQ5T0F9 858 aaKnown RBP7.39□□□□□ -1.23
SCARNA16.4-201ENST00000516956 ILDR1Q86SU0 546 aaPredicted RBP7.39□□□□□ -1.23
SCARNA16.4-201ENST00000516956 CARD14Q9BXL6 1004 aa7.39□□□□□ -1.23
SCARNA16.4-201ENST00000516956 NSD2O96028 1365 aa7.38□□□□□ -1.23
SCARNA16.4-201ENST00000516956 FYB1O15117 783 aa7.38□□□□□ -1.23
SCARNA16.4-201ENST00000516956 PPM1GO15355 546 aaPredicted RBP7.38□□□□□ -1.23
SCARNA16.4-201ENST00000516956 ANP32CO43423 234 aa7.38□□□□□ -1.23
SCARNA16.4-201ENST00000516956 TNNT2P45379 298 aaPredicted RBP7.38□□□□□ -1.23
SCARNA16.4-201ENST00000516956 AMPHP49418 695 aa7.38□□□□□ -1.23
SCARNA16.4-201ENST00000516956 ZC3H6P61129 1189 aaKnown RBP7.38□□□□□ -1.23
SCARNA16.4-201ENST00000516956 CABLES1Q8TDN4 633 aa7.38□□□□□ -1.23
SCARNA16.4-201ENST00000516956 NGLY1Q96IV0 654 aa7.38□□□□□ -1.23
SCARNA16.4-201ENST00000516956 PHF23Q9BUL5 403 aaPredicted RBP7.38□□□□□ -1.23
SCARNA16.4-201ENST00000516956 PRDM11Q9NQV5 511 aa7.38□□□□□ -1.23
SCARNA16.4-201ENST00000516956 CD163L1Q9NR16 1453 aa7.37□□□□□ -1.23
SCARNA16.4-201ENST00000516956 PNPLA6Q8IY17 1366 aa7.37□□□□□ -1.23
SCARNA16.4-201ENST00000516956 GCP02774 474 aa7.37□□□□□ -1.23
SCARNA16.4-201ENST00000516956 EVA1CP58658 441 aa7.37□□□□□ -1.23
SCARNA16.4-201ENST00000516956 AKAP12Q02952 1782 aa7.37□□□□□ -1.23
SCARNA16.4-201ENST00000516956 COL16A1Q07092 1604 aaPredicted RBP7.37□□□□□ -1.23
SCARNA16.4-201ENST00000516956 CSB-PGBD3P0DP91 1061 aa7.36□□□□□ -1.23
SCARNA16.4-201ENST00000516956 CFAP53Q96M91 514 aa7.36□□□□□ -1.23
SCARNA16.4-201ENST00000516956 C8orf37Q96NL8 207 aa7.36□□□□□ -1.23
SCARNA16.4-201ENST00000516956 ZRANB1Q9UGI0 708 aa7.36□□□□□ -1.23
SCARNA16.4-201ENST00000516956 MON2Q7Z3U7 1717 aa7.35□□□□□ -1.23
SCARNA16.4-201ENST00000516956 USP31Q70CQ4 1352 aa7.35□□□□□ -1.23
SCARNA16.4-201ENST00000516956 MYOM1P52179 1685 aa7.35□□□□□ -1.23
SCARNA16.4-201ENST00000516956 RALBP1Q15311 655 aa7.35□□□□□ -1.23
SCARNA16.4-201ENST00000516956 CCDC9Q9Y3X0 531 aaKnown RBP7.35□□□□□ -1.23
SCARNA16.4-201ENST00000516956 SSH2Q76I76 1423 aa7.35□□□□□ -1.23
SCARNA16.4-201ENST00000516956 USP19O94966 1318 aa7.34□□□□□ -1.23
SCARNA16.4-201ENST00000516956 PER1O15534 1290 aaPredicted RBP7.34□□□□□ -1.23
SCARNA16.4-201ENST00000516956 AMER1Q5JTC6 1135 aaPredicted RBP7.34□□□□□ -1.23
SCARNA16.4-201ENST00000516956 TRPM3Q9HCF6 1732 aaPredicted RBP7.34□□□□□ -1.23
SCARNA16.4-201ENST00000516956 SHPRHQ149N8 1683 aa7.34□□□□□ -1.23
SCARNA16.4-201ENST00000516956 NPC1L1Q9UHC9 1359 aa7.33□□□□□ -1.24
SCARNA16.4-201ENST00000516956 CHRNA2Q15822 529 aa7.33□□□□□ -1.24
SCARNA16.4-201ENST00000516956 DIEXFQ68CQ4 756 aaKnown RBP7.33□□□□□ -1.24
SCARNA16.4-201ENST00000516956 ZNF772Q68DY9 489 aaPredicted RBP7.33□□□□□ -1.24
SCARNA16.4-201ENST00000516956 LTV1Q96GA3 475 aaPredicted RBP7.33□□□□□ -1.24
SCARNA16.4-201ENST00000516956 STRN4Q9NRL3 753 aa7.33□□□□□ -1.24
SCARNA16.4-201ENST00000516956 SMG6Q86US8 1419 aaKnown RBP7.33□□□□□ -1.24
SCARNA16.4-201ENST00000516956 MED1Q15648 1581 aaPredicted RBP7.33□□□□□ -1.24
SCARNA16.4-201ENST00000516956 KIAA0232Q92628 1395 aa7.33□□□□□ -1.24
SCARNA16.4-201ENST00000516956 ALS2Q96Q42 1657 aa7.32□□□□□ -1.24
SCARNA16.4-201ENST00000516956 KIF20BQ96Q89 1820 aa7.32□□□□□ -1.24
SCARNA16.4-201ENST00000516956 RRS1Q15050 365 aaKnown RBP7.32□□□□□ -1.24
SCARNA16.4-201ENST00000516956 BTG4Q9NY30 223 aa7.32□□□□□ -1.24
SCARNA16.4-201ENST00000516956 USP21Q9UK80 565 aa7.32□□□□□ -1.24
SCARNA16.4-201ENST00000516956 NUDCQ9Y266 331 aa7.32□□□□□ -1.24
SCARNA16.4-201ENST00000516956 NRKQ7Z2Y5 1582 aa7.32□□□□□ -1.24
SCARNA16.4-201ENST00000516956 PIK3C2AO00443 1686 aa7.32□□□□□ -1.24
SCARNA16.4-201ENST00000516956 AFF2P51816 1311 aa7.31□□□□□ -1.24
SCARNA16.4-201ENST00000516956 MAP3K19Q56UN5 1328 aa7.31□□□□□ -1.24
SCARNA16.4-201ENST00000516956 COL22A1Q8NFW1 1626 aaPredicted RBP7.31□□□□□ -1.24
SCARNA16.4-201ENST00000516956 A0A0G2JS52 829 aa7.31□□□□□ -1.24
SCARNA16.4-201ENST00000516956 OVOS2A0A0J9YW53 1432 aa7.31□□□□□ -1.24
SCARNA16.4-201ENST00000516956 FAM83GA6ND36 823 aa7.31□□□□□ -1.24
SCARNA16.4-201ENST00000516956 NEFMP07197 916 aa7.31□□□□□ -1.24
SCARNA16.4-201ENST00000516956 MYT1Q01538 1121 aa7.31□□□□□ -1.24
SCARNA16.4-201ENST00000516956 OVOS2Q6IE36 1432 aa7.31□□□□□ -1.24
SCARNA16.4-201ENST00000516956 TOM1L2Q6ZVM7 507 aa7.31□□□□□ -1.24
SCARNA16.4-201ENST00000516956 ARHGEF25Q86VW2 580 aa7.31□□□□□ -1.24
SCARNA16.4-201ENST00000516956 IP6K1Q92551 441 aa7.31□□□□□ -1.24
SCARNA16.4-201ENST00000516956 NLRP2Q9NX02 1062 aa7.31□□□□□ -1.24
SCARNA16.4-201ENST00000516956 CPDO75976 1380 aa7.31□□□□□ -1.24
SCARNA16.4-201ENST00000516956 AATKQ6ZMQ8 1374 aa7.31□□□□□ -1.24
SCARNA16.4-201ENST00000516956 MYBBP1AQ9BQG0 1328 aaKnown RBP7.3□□□□□ -1.24
SCARNA16.4-201ENST00000516956 MTHFSP49914 203 aa7.3□□□□□ -1.24
SCARNA16.4-201ENST00000516956 UNC5CLQ8IV45 518 aa7.3□□□□□ -1.24
SCARNA16.4-201ENST00000516956 ANKRD24Q8TF21 1146 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms