RNA–Protein interactions for RNA: ENST00000516226.1

RNU6-397P-201, Transcript of RNA, U6 small nuclear 397, pseudogene, humanhuman

BASIC

Gene RNU6-397P, Length 104 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-397P-201ENST00000516226 RSBN1LQ6PCB5 846 aaPredicted RBP6.2□□□□□ -1.42
RNU6-397P-201ENST00000516226 LYPD8Q6UX82 237 aa6.2□□□□□ -1.42
RNU6-397P-201ENST00000516226 BEGAINQ9BUH8 593 aa6.2□□□□□ -1.42
RNU6-397P-201ENST00000516226 NDUFV2P19404 249 aa6.19□□□□□ -1.42
RNU6-397P-201ENST00000516226 TRIM46Q7Z4K8 759 aa6.19□□□□□ -1.42
RNU6-397P-201ENST00000516226 BAP1Q92560 729 aa6.19□□□□□ -1.42
RNU6-397P-201ENST00000516226 SPTLC1O15269 473 aa6.18□□□□□ -1.42
RNU6-397P-201ENST00000516226 NNTQ13423 1086 aa6.18□□□□□ -1.42
RNU6-397P-201ENST00000516226 TUSC1Q2TAM9 212 aa6.18□□□□□ -1.42
RNU6-397P-201ENST00000516226 LINC01559Q495D7 138 aa6.18□□□□□ -1.42
RNU6-397P-201ENST00000516226 ARMC2Q8NEN0 867 aa6.18□□□□□ -1.42
RNU6-397P-201ENST00000516226 ZC3H15Q8WU90 426 aaKnown RBP6.18□□□□□ -1.42
RNU6-397P-201ENST00000516226 TBC1D2Q9BYX2 928 aa6.18□□□□□ -1.42
RNU6-397P-201ENST00000516226 H3BM21 787 aa6.17□□□□□ -1.42
RNU6-397P-201ENST00000516226 BMP1P13497 986 aa6.17□□□□□ -1.42
RNU6-397P-201ENST00000516226 CTHP32929 405 aa6.17□□□□□ -1.42
RNU6-397P-201ENST00000516226 CDK15Q96Q40 435 aa6.17□□□□□ -1.42
RNU6-397P-201ENST00000516226 TLL2Q9Y6L7 1015 aa6.17□□□□□ -1.42
RNU6-397P-201ENST00000516226 F12P00748 615 aaPredicted RBP6.16□□□□□ -1.42
RNU6-397P-201ENST00000516226 NR5A1Q13285 461 aa6.16□□□□□ -1.42
RNU6-397P-201ENST00000516226 MRPL14Q6P1L8 145 aaKnown RBP6.16□□□□□ -1.42
RNU6-397P-201ENST00000516226 BPHLQ86WA6 291 aaPredicted RBP6.16□□□□□ -1.42
RNU6-397P-201ENST00000516226 PARP9Q8IXQ6 854 aa6.16□□□□□ -1.42
RNU6-397P-201ENST00000516226 AK7Q96M32 723 aa6.16□□□□□ -1.42
RNU6-397P-201ENST00000516226 TIMP2P16035 220 aa6.15□□□□□ -1.42
RNU6-397P-201ENST00000516226 NBPF14Q5TI25 921 aa6.15□□□□□ -1.42
RNU6-397P-201ENST00000516226 ZFP42Q96MM3 310 aa6.15□□□□□ -1.42
RNU6-397P-201ENST00000516226 HRCP23327 699 aa6.14□□□□□ -1.43
RNU6-397P-201ENST00000516226 WDR4P57081 412 aaKnown RBP6.14□□□□□ -1.43
RNU6-397P-201ENST00000516226 LCE2CQ5TA81 110 aa6.14□□□□□ -1.43
RNU6-397P-201ENST00000516226 RIC3Q7Z5B4 369 aa6.14□□□□□ -1.43
RNU6-397P-201ENST00000516226 GPKOWQ92917 476 aaPredicted RBP eCLIP6.14□□□□□ -1.43
RNU6-397P-201ENST00000516226 TRIM66O15016 1216 aa6.13□□□□□ -1.43
RNU6-397P-201ENST00000516226 UPP2O95045 317 aa6.13□□□□□ -1.43
RNU6-397P-201ENST00000516226 VSIG8P0DPA2 414 aa6.13□□□□□ -1.43
RNU6-397P-201ENST00000516226 ZSCAN1Q8NBB4 408 aa6.13□□□□□ -1.43
RNU6-397P-201ENST00000516226 HELBQ8NG08 1087 aaPredicted RBP6.13□□□□□ -1.43
RNU6-397P-201ENST00000516226 MAP4K5Q9Y4K4 846 aa6.13□□□□□ -1.43
RNU6-397P-201ENST00000516226 CFAP99D6REC4 459 aa6.12□□□□□ -1.43
RNU6-397P-201ENST00000516226 KLF16Q9BXK1 252 aaPredicted RBP6.12□□□□□ -1.43
RNU6-397P-201ENST00000516226 GMPRP36959 345 aa6.11□□□□□ -1.43
RNU6-397P-201ENST00000516226 AGERQ15109 404 aa6.11□□□□□ -1.43
RNU6-397P-201ENST00000516226 TRMT44Q8IYL2 757 aaKnown RBP6.11□□□□□ -1.43
RNU6-397P-201ENST00000516226 C1QTNF2Q9BXJ5 285 aa6.11□□□□□ -1.43
RNU6-397P-201ENST00000516226 MAP10Q9P2G4 905 aa6.11□□□□□ -1.43
RNU6-397P-201ENST00000516226 ZIC2O95409 532 aaPredicted RBP6.1□□□□□ -1.43
RNU6-397P-201ENST00000516226 PURBQ96QR8 312 aaKnown RBP6.1□□□□□ -1.43
RNU6-397P-201ENST00000516226 RSPH6AQ9H0K4 717 aa6.1□□□□□ -1.43
RNU6-397P-201ENST00000516226 PCDHB15Q9Y5E8 787 aa6.1□□□□□ -1.43
RNU6-397P-201ENST00000516226 NUTM2BA6NNL0 878 aaPredicted RBP6.09□□□□□ -1.43
RNU6-397P-201ENST00000516226 NUTM2EB1AL46 878 aaPredicted RBP6.09□□□□□ -1.43
RNU6-397P-201ENST00000516226 ARID5BQ14865 1188 aa6.09□□□□□ -1.43
RNU6-397P-201ENST00000516226 NUTM2DQ5VT03 806 aaPredicted RBP6.09□□□□□ -1.43
RNU6-397P-201ENST00000516226 NUTM2AQ8IVF1 878 aaPredicted RBP6.09□□□□□ -1.43
RNU6-397P-201ENST00000516226 MEIOBQ8N635 442 aa6.09□□□□□ -1.43
RNU6-397P-201ENST00000516226 FOXJ1Q92949 421 aa6.09□□□□□ -1.43
RNU6-397P-201ENST00000516226 CDV3Q9UKY7 258 aaKnown RBP6.09□□□□□ -1.43
RNU6-397P-201ENST00000516226 MAN1A2O60476 641 aa6.08□□□□□ -1.44
RNU6-397P-201ENST00000516226 LILRB3O75022 631 aa6.08□□□□□ -1.44
RNU6-397P-201ENST00000516226 MYSM1Q5VVJ2 828 aa6.08□□□□□ -1.44
RNU6-397P-201ENST00000516226 SH3RF1Q7Z6J0 888 aa6.08□□□□□ -1.44
RNU6-397P-201ENST00000516226 EMILIN1Q9Y6C2 1016 aa6.08□□□□□ -1.44
RNU6-397P-201ENST00000516226 ZC3H4Q9UPT8 1303 aaKnown RBP6.07□□□□□ -1.44
RNU6-397P-201ENST00000516226 PDE4DQ08499 809 aa6.07□□□□□ -1.44
RNU6-397P-201ENST00000516226 LINC00528Q8N1L1 170 aa6.07□□□□□ -1.44
RNU6-397P-201ENST00000516226 CABLES1Q8TDN4 633 aa6.07□□□□□ -1.44
RNU6-397P-201ENST00000516226 ITPKCQ96DU7 683 aa6.07□□□□□ -1.44
RNU6-397P-201ENST00000516226 TSEN34Q9BSV6 310 aaKnown RBP6.07□□□□□ -1.44
RNU6-397P-201ENST00000516226 ERBB4Q15303 1308 aa6.06□□□□□ -1.44
RNU6-397P-201ENST00000516226 GRM5P41594 1212 aa6.06□□□□□ -1.44
RNU6-397P-201ENST00000516226 CLK2P49760 499 aaKnown RBP6.06□□□□□ -1.44
RNU6-397P-201ENST00000516226 SH3BP5LQ7L8J4 393 aa6.06□□□□□ -1.44
RNU6-397P-201ENST00000516226 NR3C2P08235 984 aa6.05□□□□□ -1.44
RNU6-397P-201ENST00000516226 BMP2P12643 396 aa6.05□□□□□ -1.44
RNU6-397P-201ENST00000516226 LORP23490 312 aaPredicted RBP6.05□□□□□ -1.44
RNU6-397P-201ENST00000516226 C4orf48Q5BLP8 95 aa6.05□□□□□ -1.44
RNU6-397P-201ENST00000516226 VASH1Q7L8A9 365 aaPredicted RBP6.05□□□□□ -1.44
RNU6-397P-201ENST00000516226 CCDC116Q8IYX3 515 aa6.05□□□□□ -1.44
RNU6-397P-201ENST00000516226 TSC1Q92574 1164 aa6.05□□□□□ -1.44
RNU6-397P-201ENST00000516226 TRIM52Q96A61 297 aa6.05□□□□□ -1.44
RNU6-397P-201ENST00000516226 ZFAND3Q9H8U3 227 aa6.05□□□□□ -1.44
RNU6-397P-201ENST00000516226 PGPEP1Q9NXJ5 209 aa6.05□□□□□ -1.44
RNU6-397P-201ENST00000516226 LIMD1Q9UGP4 676 aa6.05□□□□□ -1.44
RNU6-397P-201ENST00000516226 PER1O15534 1290 aaPredicted RBP6.04□□□□□ -1.44
RNU6-397P-201ENST00000516226 FSHRP23945 695 aa6.04□□□□□ -1.44
RNU6-397P-201ENST00000516226 VEGFBP49765 207 aa6.04□□□□□ -1.44
RNU6-397P-201ENST00000516226 DHX9Q08211 1270 aaKnown RBP6.04□□□□□ -1.44
RNU6-397P-201ENST00000516226 CSPP1Q1MSJ5 1256 aa6.04□□□□□ -1.44
RNU6-397P-201ENST00000516226 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.04□□□□□ -1.44
RNU6-397P-201ENST00000516226 SOS2Q07890 1332 aaPredicted RBP6.03□□□□□ -1.44
RNU6-397P-201ENST00000516226 QPCTQ16769 361 aa6.03□□□□□ -1.44
RNU6-397P-201ENST00000516226 C6orf118Q5T5N4 469 aa6.03□□□□□ -1.44
RNU6-397P-201ENST00000516226 PDXDC2PQ6P474 469 aa6.03□□□□□ -1.44
RNU6-397P-201ENST00000516226 PNMA1Q8ND90 353 aa6.03□□□□□ -1.44
RNU6-397P-201ENST00000516226 PPFIA3O75145 1194 aa6.02□□□□□ -1.45
RNU6-397P-201ENST00000516226 GPSM3Q9Y4H4 160 aa6.02□□□□□ -1.45
RNU6-397P-201ENST00000516226 MAGEB6P1A0A0J9YX57 407 aa6.01□□□□□ -1.45
RNU6-397P-201ENST00000516226 ERFEQ4G0M1 354 aa6.01□□□□□ -1.45
RNU6-397P-201ENST00000516226 SLC10A4Q96EP9 437 aa6.01□□□□□ -1.45
RNU6-397P-201ENST00000516226 TTLL8A6PVC2 850 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms