RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 PDE3BQ13370 1112 aa13.67□□□□□ -0.22
SNF8-214ENST00000515174 POLR3AO14802 1390 aaPredicted RBP13.67□□□□□ -0.22
SNF8-214ENST00000515174 ANKRD26Q9UPS8 1709 aa13.67□□□□□ -0.22
SNF8-214ENST00000515174 CNGB1Q14028 1251 aaPredicted RBP13.66□□□□□ -0.22
SNF8-214ENST00000515174 SPATA31A6Q5VVP1 1343 aa13.65□□□□□ -0.22
SNF8-214ENST00000515174 BLMP54132 1417 aaPredicted RBP13.65□□□□□ -0.22
SNF8-214ENST00000515174 RXRBP28702 533 aa13.65□□□□□ -0.22
SNF8-214ENST00000515174 NGEFQ8N5V2 710 aa13.65□□□□□ -0.22
SNF8-214ENST00000515174 SMG6Q86US8 1419 aaKnown RBP13.64□□□□□ -0.23
SNF8-214ENST00000515174 CD163L1Q9NR16 1453 aa13.64□□□□□ -0.23
SNF8-214ENST00000515174 NUTM2BA6NNL0 878 aaPredicted RBP13.64□□□□□ -0.23
SNF8-214ENST00000515174 NUTM2EB1AL46 878 aaPredicted RBP13.64□□□□□ -0.23
SNF8-214ENST00000515174 ATF3P18847 181 aa13.64□□□□□ -0.23
SNF8-214ENST00000515174 HDGFL2Q7Z4V5 671 aaPredicted RBP13.64□□□□□ -0.23
SNF8-214ENST00000515174 MORC1Q86VD1 984 aa13.64□□□□□ -0.23
SNF8-214ENST00000515174 NUTM2AQ8IVF1 878 aaPredicted RBP13.64□□□□□ -0.23
SNF8-214ENST00000515174 A0A1W2PP64 1363 aa13.63□□□□□ -0.23
SNF8-214ENST00000515174 ERICH6BQ5W0A0 696 aa13.63□□□□□ -0.23
SNF8-214ENST00000515174 CCDC61Q9Y6R9 512 aa13.62□□□□□ -0.23
SNF8-214ENST00000515174 LRP6O75581 1613 aa13.61□□□□□ -0.23
SNF8-214ENST00000515174 KIF1AQ12756 1690 aa13.61□□□□□ -0.23
SNF8-214ENST00000515174 NCBP3Q53F19 620 aaKnown RBP13.61□□□□□ -0.23
SNF8-214ENST00000515174 CADPS2Q86UW7 1296 aa13.61□□□□□ -0.23
SNF8-214ENST00000515174 ZNF692Q9BU19 519 aaPredicted RBP13.61□□□□□ -0.23
SNF8-214ENST00000515174 CABP1Q9NZU7 370 aa13.61□□□□□ -0.23
SNF8-214ENST00000515174 ADAMTS8Q9UP79 889 aa13.61□□□□□ -0.23
SNF8-214ENST00000515174 NUDCQ9Y266 331 aa13.61□□□□□ -0.23
SNF8-214ENST00000515174 CPSF1Q10570 1443 aaKnown RBP13.61□□□□□ -0.23
SNF8-214ENST00000515174 WDR43Q15061 677 aaKnown RBP eCLIP13.6□□□□□ -0.23
SNF8-214ENST00000515174 COL16A1Q07092 1604 aaPredicted RBP13.6□□□□□ -0.23
SNF8-214ENST00000515174 FYB1O15117 783 aa13.59□□□□□ -0.23
SNF8-214ENST00000515174 NUDT16Q96DE0 195 aaKnown RBP13.59□□□□□ -0.23
SNF8-214ENST00000515174 C19orf44Q9H6X5 657 aa13.59□□□□□ -0.23
SNF8-214ENST00000515174 SUPT16HQ9Y5B9 1047 aaKnown RBP13.59□□□□□ -0.23
SNF8-214ENST00000515174 PPIP5K1Q6PFW1 1433 aa13.58□□□□□ -0.24
SNF8-214ENST00000515174 PLEKHG3A1L390 1219 aa13.58□□□□□ -0.24
SNF8-214ENST00000515174 NEFLP07196 543 aa13.58□□□□□ -0.24
SNF8-214ENST00000515174 PRR36Q9H6K5 1346 aa13.58□□□□□ -0.24
SNF8-214ENST00000515174 ANKARQ7Z5J8 1434 aa13.57□□□□□ -0.24
SNF8-214ENST00000515174 MARF1Q9Y4F3 1742 aaKnown RBP13.57□□□□□ -0.24
SNF8-214ENST00000515174 RNF123Q5XPI4 1314 aa13.57□□□□□ -0.24
SNF8-214ENST00000515174 EDC4Q6P2E9 1401 aaKnown RBP13.56□□□□□ -0.24
SNF8-214ENST00000515174 NCOA3Q9Y6Q9 1424 aa13.56□□□□□ -0.24
SNF8-214ENST00000515174 CFAP53Q96M91 514 aa13.56□□□□□ -0.24
SNF8-214ENST00000515174 AFF2P51816 1311 aa13.56□□□□□ -0.24
SNF8-214ENST00000515174 TRPM3Q9HCF6 1732 aaPredicted RBP13.56□□□□□ -0.24
SNF8-214ENST00000515174 DCCP43146 1447 aa13.56□□□□□ -0.24
SNF8-214ENST00000515174 MTHFSP49914 203 aa13.55□□□□□ -0.24
SNF8-214ENST00000515174 PIK3C2AO00443 1686 aa13.54□□□□□ -0.24
SNF8-214ENST00000515174 USP54Q70EL1 1684 aa13.54□□□□□ -0.24
SNF8-214ENST00000515174 BRINP3Q76B58 766 aa13.54□□□□□ -0.24
SNF8-214ENST00000515174 PNPLA6Q8IY17 1366 aa13.54□□□□□ -0.24
SNF8-214ENST00000515174 AHDC1Q5TGY3 1603 aaPredicted RBP13.53□□□□□ -0.24
SNF8-214ENST00000515174 C8orf37Q96NL8 207 aa13.53□□□□□ -0.24
SNF8-214ENST00000515174 ZNF521Q96K83 1311 aa13.53□□□□□ -0.24
SNF8-214ENST00000515174 MST1RQ04912 1400 aa13.53□□□□□ -0.24
SNF8-214ENST00000515174 SHPRHQ149N8 1683 aa13.53□□□□□ -0.24
SNF8-214ENST00000515174 NUTM2FA1L443 756 aa13.52□□□□□ -0.25
SNF8-214ENST00000515174 FKBP8Q14318 412 aa13.52□□□□□ -0.25
SNF8-214ENST00000515174 QTRT2Q9H974 415 aaKnown RBP13.52□□□□□ -0.25
SNF8-214ENST00000515174 AATKQ6ZMQ8 1374 aa13.52□□□□□ -0.25
SNF8-214ENST00000515174 CDK12Q9NYV4 1490 aaPredicted RBP13.52□□□□□ -0.25
SNF8-214ENST00000515174 NHSL1Q5SYE7 1610 aa13.52□□□□□ -0.25
SNF8-214ENST00000515174 RBM6P78332 1123 aaKnown RBP13.5□□□□□ -0.25
SNF8-214ENST00000515174 LRRC59Q96AG4 307 aaKnown RBP13.5□□□□□ -0.25
SNF8-214ENST00000515174 GGNBP2Q9H3C7 697 aa13.5□□□□□ -0.25
SNF8-214ENST00000515174 C1orf167Q5SNV9 1468 aa13.49□□□□□ -0.25
SNF8-214ENST00000515174 TRMT2AQ8IZ69 625 aaKnown RBP13.49□□□□□ -0.25
SNF8-214ENST00000515174 RUNDC1Q96C34 613 aa13.49□□□□□ -0.25
SNF8-214ENST00000515174 ALS2Q96Q42 1657 aa13.49□□□□□ -0.25
SNF8-214ENST00000515174 CRYBG1Q9Y4K1 1723 aa13.48□□□□□ -0.25
SNF8-214ENST00000515174 CCDC27Q2M243 656 aa13.48□□□□□ -0.25
SNF8-214ENST00000515174 NGLY1Q96IV0 654 aa13.48□□□□□ -0.25
SNF8-214ENST00000515174 USP6P35125 1406 aa13.47□□□□□ -0.25
SNF8-214ENST00000515174 SSH2Q76I76 1423 aa13.47□□□□□ -0.25
SNF8-214ENST00000515174 ABCA3Q99758 1704 aa13.47□□□□□ -0.25
SNF8-214ENST00000515174 ADAMTS2O95450 1211 aa13.47□□□□□ -0.25
SNF8-214ENST00000515174 PNNQ9H307 717 aaKnown RBP13.47□□□□□ -0.25
SNF8-214ENST00000515174 COL3A1P02461 1466 aaPredicted RBP13.47□□□□□ -0.25
SNF8-214ENST00000515174 RGS12O14924 1447 aa13.47□□□□□ -0.25
SNF8-214ENST00000515174 TTC21AQ8NDW8 1320 aa13.46□□□□□ -0.25
SNF8-214ENST00000515174 GOLGA2Q08379 1002 aa13.46□□□□□ -0.25
SNF8-214ENST00000515174 DDX17Q92841 729 aaKnown RBP13.46□□□□□ -0.25
SNF8-214ENST00000515174 PHRF1Q9P1Y6 1649 aaKnown RBP13.46□□□□□ -0.26
SNF8-214ENST00000515174 ACEP12821 1306 aa13.45□□□□□ -0.26
SNF8-214ENST00000515174 TTC21BQ7Z4L5 1316 aa13.45□□□□□ -0.26
SNF8-214ENST00000515174 APAF1O14727 1248 aa13.45□□□□□ -0.26
SNF8-214ENST00000515174 TNNT2P45379 298 aaPredicted RBP13.45□□□□□ -0.26
SNF8-214ENST00000515174 COG3Q96JB2 828 aa13.45□□□□□ -0.26
SNF8-214ENST00000515174 POLKQ9UBT6 870 aa13.45□□□□□ -0.26
SNF8-214ENST00000515174 LTN1O94822 1766 aa13.45□□□□□ -0.26
SNF8-214ENST00000515174 MAP2P11137 1827 aaKnown RBP13.44□□□□□ -0.26
SNF8-214ENST00000515174 SLFN5Q08AF3 891 aa13.44□□□□□ -0.26
SNF8-214ENST00000515174 ZRANB1Q9UGI0 708 aa13.44□□□□□ -0.26
SNF8-214ENST00000515174 USP31Q70CQ4 1352 aa13.44□□□□□ -0.26
SNF8-214ENST00000515174 DIAPH1O60610 1272 aaKnown RBP13.43□□□□□ -0.26
SNF8-214ENST00000515174 DUSP27Q5VZP5 1158 aa13.43□□□□□ -0.26
SNF8-214ENST00000515174 WDR63Q8IWG1 891 aa13.43□□□□□ -0.26
SNF8-214ENST00000515174 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.43□□□□□ -0.26
SNF8-214ENST00000515174 PMFBP1Q8TBY8 1022 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 218.6 ms