RNA–Protein interactions for RNA: ENST00000514404.1

AC008560.1-202, humanhuman

APPRIS ALT2 TSL 4

Gene AC008560.1, Length 332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008560.1-202ENST00000514404 SNIP1Q8TAD8 396 aaKnown RBP4.43□□□□□ -1.7
AC008560.1-202ENST00000514404 KDM4CQ9H3R0 1056 aa4.43□□□□□ -1.7
AC008560.1-202ENST00000514404 F12P00748 615 aaPredicted RBP4.42□□□□□ -1.7
AC008560.1-202ENST00000514404 DESI1Q6ICB0 168 aa4.42□□□□□ -1.7
AC008560.1-202ENST00000514404 PROCA1Q8NCQ7 364 aaPredicted RBP4.42□□□□□ -1.7
AC008560.1-202ENST00000514404 ZBTB3Q9H5J0 574 aa4.42□□□□□ -1.7
AC008560.1-202ENST00000514404 SPDYE5A6NIY4 337 aa4.41□□□□□ -1.7
AC008560.1-202ENST00000514404 ALDH1A1P00352 501 aa4.41□□□□□ -1.7
AC008560.1-202ENST00000514404 CTHP32929 405 aa4.41□□□□□ -1.7
AC008560.1-202ENST00000514404 CLK2P49760 499 aaKnown RBP4.41□□□□□ -1.7
AC008560.1-202ENST00000514404 WNT7BP56706 349 aa4.41□□□□□ -1.7
AC008560.1-202ENST00000514404 C4orf48Q5BLP8 95 aa4.41□□□□□ -1.7
AC008560.1-202ENST00000514404 PRPF38BQ5VTL8 546 aaKnown RBP4.41□□□□□ -1.7
AC008560.1-202ENST00000514404 CRIPAKQ8N1N5 446 aa4.41□□□□□ -1.7
AC008560.1-202ENST00000514404 TSC1Q92574 1164 aa4.41□□□□□ -1.7
AC008560.1-202ENST00000514404 FOXJ1Q92949 421 aa4.41□□□□□ -1.7
AC008560.1-202ENST00000514404 TLL2Q9Y6L7 1015 aa4.41□□□□□ -1.7
AC008560.1-202ENST00000514404 NUTM2BA6NNL0 878 aaPredicted RBP4.4□□□□□ -1.71
AC008560.1-202ENST00000514404 NUTM2EB1AL46 878 aaPredicted RBP4.4□□□□□ -1.71
AC008560.1-202ENST00000514404 NFX1Q12986 1120 aaKnown RBP4.4□□□□□ -1.71
AC008560.1-202ENST00000514404 DIXDC1Q155Q3 683 aa4.4□□□□□ -1.71
AC008560.1-202ENST00000514404 CTC1Q2NKJ3 1217 aa4.4□□□□□ -1.71
AC008560.1-202ENST00000514404 NUTM2DQ5VT03 806 aaPredicted RBP4.4□□□□□ -1.71
AC008560.1-202ENST00000514404 NUTM2AQ8IVF1 878 aaPredicted RBP4.4□□□□□ -1.71
AC008560.1-202ENST00000514404 ZNF511Q8NB15 262 aa4.4□□□□□ -1.71
AC008560.1-202ENST00000514404 EHBP1Q8NDI1 1231 aa4.4□□□□□ -1.71
AC008560.1-202ENST00000514404 WIPF1O43516 503 aa4.39□□□□□ -1.71
AC008560.1-202ENST00000514404 SMCPP49901 116 aaPredicted RBP4.39□□□□□ -1.71
AC008560.1-202ENST00000514404 CTDSPL2Q05D32 466 aa4.39□□□□□ -1.71
AC008560.1-202ENST00000514404 SNRPBP14678 240 aaKnown RBP4.38□□□□□ -1.71
AC008560.1-202ENST00000514404 TUSC1Q2TAM9 212 aa4.38□□□□□ -1.71
AC008560.1-202ENST00000514404 LRRN4Q8WUT4 740 aa4.38□□□□□ -1.71
AC008560.1-202ENST00000514404 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.38□□□□□ -1.71
AC008560.1-202ENST00000514404 ATP13A2Q9NQ11 1180 aa4.38□□□□□ -1.71
AC008560.1-202ENST00000514404 FAM181BA6NEQ2 426 aa4.37□□□□□ -1.71
AC008560.1-202ENST00000514404 TERTO14746 1132 aaKnown RBP4.37□□□□□ -1.71
AC008560.1-202ENST00000514404 BMP1P13497 986 aa4.37□□□□□ -1.71
AC008560.1-202ENST00000514404 SKIV2LQ15477 1246 aaKnown RBP4.37□□□□□ -1.71
AC008560.1-202ENST00000514404 LCE2CQ5TA81 110 aa4.37□□□□□ -1.71
AC008560.1-202ENST00000514404 SH3D19Q5HYK7 790 aa4.36□□□□□ -1.71
AC008560.1-202ENST00000514404 TRIM46Q7Z4K8 759 aa4.36□□□□□ -1.71
AC008560.1-202ENST00000514404 EPS8L1Q8TE68 723 aa4.36□□□□□ -1.71
AC008560.1-202ENST00000514404 NR3C2P08235 984 aa4.35□□□□□ -1.71
AC008560.1-202ENST00000514404 GRM5P41594 1212 aa4.35□□□□□ -1.71
AC008560.1-202ENST00000514404 IL27Q8NEV9 243 aa4.35□□□□□ -1.71
AC008560.1-202ENST00000514404 KLF16Q9BXK1 252 aaPredicted RBP4.35□□□□□ -1.71
AC008560.1-202ENST00000514404 RSPH6AQ9H0K4 717 aa4.35□□□□□ -1.71
AC008560.1-202ENST00000514404 SENP2Q9HC62 589 aa4.35□□□□□ -1.71
AC008560.1-202ENST00000514404 HMX1Q9NP08 348 aaPredicted RBP4.35□□□□□ -1.71
AC008560.1-202ENST00000514404 VARSP26640 1264 aaKnown RBP4.34□□□□□ -1.71
AC008560.1-202ENST00000514404 NNTQ13423 1086 aa4.34□□□□□ -1.71
AC008560.1-202ENST00000514404 ARID5BQ14865 1188 aa4.34□□□□□ -1.71
AC008560.1-202ENST00000514404 NR6A1Q15406 480 aa4.34□□□□□ -1.71
AC008560.1-202ENST00000514404 SH3RF1Q7Z6J0 888 aa4.34□□□□□ -1.71
AC008560.1-202ENST00000514404 SLC16A10Q8TF71 515 aa4.34□□□□□ -1.71
AC008560.1-202ENST00000514404 OCSTAMPQ9BR26 566 aa4.34□□□□□ -1.71
AC008560.1-202ENST00000514404 WASF2Q9Y6W5 498 aa4.34□□□□□ -1.71
AC008560.1-202ENST00000514404 CAPN5O15484 640 aaPredicted RBP4.33□□□□□ -1.72
AC008560.1-202ENST00000514404 TIMP2P16035 220 aa4.33□□□□□ -1.72
AC008560.1-202ENST00000514404 BRPF1P55201 1214 aaPredicted RBP4.33□□□□□ -1.72
AC008560.1-202ENST00000514404 AGERQ15109 404 aa4.33□□□□□ -1.72
AC008560.1-202ENST00000514404 NEUROD2Q15784 382 aa4.33□□□□□ -1.72
AC008560.1-202ENST00000514404 TPRNQ4KMQ1 711 aa4.33□□□□□ -1.72
AC008560.1-202ENST00000514404 PPP2R2DQ66LE6 453 aa4.33□□□□□ -1.72
AC008560.1-202ENST00000514404 SH3BP5LQ7L8J4 393 aa4.33□□□□□ -1.72
AC008560.1-202ENST00000514404 HELBQ8NG08 1087 aaPredicted RBP4.33□□□□□ -1.72
AC008560.1-202ENST00000514404 DDRGK1Q96HY6 314 aa4.33□□□□□ -1.72
AC008560.1-202ENST00000514404 TRIM47Q96LD4 638 aa4.33□□□□□ -1.72
AC008560.1-202ENST00000514404 CDK15Q96Q40 435 aa4.33□□□□□ -1.72
AC008560.1-202ENST00000514404 ZFAND3Q9H8U3 227 aa4.33□□□□□ -1.72
AC008560.1-202ENST00000514404 MAGEB6P1A0A0J9YX57 407 aa4.32□□□□□ -1.72
AC008560.1-202ENST00000514404 AP1G2O75843 785 aa4.32□□□□□ -1.72
AC008560.1-202ENST00000514404 ADH1CP00326 375 aa4.32□□□□□ -1.72
AC008560.1-202ENST00000514404 MPNDQ8N594 471 aa4.32□□□□□ -1.72
AC008560.1-202ENST00000514404 KIFC2Q96AC6 838 aa4.32□□□□□ -1.72
AC008560.1-202ENST00000514404 ITPKCQ96DU7 683 aa4.32□□□□□ -1.72
AC008560.1-202ENST00000514404 C1QTNF2Q9BXJ5 285 aa4.32□□□□□ -1.72
AC008560.1-202ENST00000514404 ATP1B4Q9UN42 357 aaPredicted RBP4.32□□□□□ -1.72
AC008560.1-202ENST00000514404 SOBPA7XYQ1 873 aa4.31□□□□□ -1.72
AC008560.1-202ENST00000514404 RFC5P40937 340 aa4.31□□□□□ -1.72
AC008560.1-202ENST00000514404 WDR4P57081 412 aaKnown RBP4.31□□□□□ -1.72
AC008560.1-202ENST00000514404 ERFEQ4G0M1 354 aa4.31□□□□□ -1.72
AC008560.1-202ENST00000514404 BPHLQ86WA6 291 aaPredicted RBP4.31□□□□□ -1.72
AC008560.1-202ENST00000514404 ZSCAN1Q8NBB4 408 aa4.31□□□□□ -1.72
AC008560.1-202ENST00000514404 FAM174AQ8TBP5 190 aa4.31□□□□□ -1.72
AC008560.1-202ENST00000514404 ZFP42Q96MM3 310 aa4.31□□□□□ -1.72
AC008560.1-202ENST00000514404 CARD14Q9BXL6 1004 aa4.31□□□□□ -1.72
AC008560.1-202ENST00000514404 PRKCSHP14314 528 aaPredicted RBP4.3□□□□□ -1.72
AC008560.1-202ENST00000514404 VEGFBP49765 207 aa4.3□□□□□ -1.72
AC008560.1-202ENST00000514404 PURBQ96QR8 312 aaKnown RBP4.3□□□□□ -1.72
AC008560.1-202ENST00000514404 FKBPLQ9UIM3 349 aa4.3□□□□□ -1.72
AC008560.1-202ENST00000514404 ZIC2O95409 532 aaPredicted RBP4.29□□□□□ -1.72
AC008560.1-202ENST00000514404 USP17L8P0C7I0 530 aa4.29□□□□□ -1.72
AC008560.1-202ENST00000514404 FSHRP23945 695 aa4.29□□□□□ -1.72
AC008560.1-202ENST00000514404 GMPRP36959 345 aa4.29□□□□□ -1.72
AC008560.1-202ENST00000514404 TRIM34Q9BYJ4 488 aa4.29□□□□□ -1.72
AC008560.1-202ENST00000514404 LOC100996750A0A140TA64 210 aa4.28□□□□□ -1.72
AC008560.1-202ENST00000514404 NBPF14Q5TI25 921 aa4.28□□□□□ -1.72
AC008560.1-202ENST00000514404 MRPL14Q6P1L8 145 aaKnown RBP4.28□□□□□ -1.72
AC008560.1-202ENST00000514404 VASH1Q7L8A9 365 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms