RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 CCDC61Q9Y6R9 512 aa4.48□□□□□ -1.69
PVT1-202ENST00000512617 CREB3O43889 395 aa4.47□□□□□ -1.69
PVT1-202ENST00000512617 ATP2B4P23634 1241 aa4.47□□□□□ -1.69
PVT1-202ENST00000512617 GNL2Q13823 731 aaKnown RBP4.47□□□□□ -1.69
PVT1-202ENST00000512617 TCEAL1Q15170 157 aa4.47□□□□□ -1.69
PVT1-202ENST00000512617 RTL5Q5HYW3 569 aaPredicted RBP4.47□□□□□ -1.69
PVT1-202ENST00000512617 NT5DC4Q86YG4 428 aa4.47□□□□□ -1.69
PVT1-202ENST00000512617 CCAR1Q8IX12 1150 aaKnown RBP4.47□□□□□ -1.69
PVT1-202ENST00000512617 NLGN1Q8N2Q7 840 aa4.47□□□□□ -1.69
PVT1-202ENST00000512617 CLP1Q92989 425 aaKnown RBP4.47□□□□□ -1.69
PVT1-202ENST00000512617 ASB16Q96NS5 453 aa4.47□□□□□ -1.69
PVT1-202ENST00000512617 U2SURPO15042 1029 aaKnown RBP4.46□□□□□ -1.7
PVT1-202ENST00000512617 GPR37L1O60883 481 aa4.46□□□□□ -1.7
PVT1-202ENST00000512617 MRPL58Q14197 206 aaKnown RBP4.46□□□□□ -1.7
PVT1-202ENST00000512617 COL19A1Q14993 1142 aa4.46□□□□□ -1.7
PVT1-202ENST00000512617 FOXD4L6Q3SYB3 417 aaPredicted RBP4.46□□□□□ -1.7
PVT1-202ENST00000512617 FOXD4L3Q6VB84 417 aaPredicted RBP4.46□□□□□ -1.7
PVT1-202ENST00000512617 NUTM1Q86Y26 1132 aa4.46□□□□□ -1.7
PVT1-202ENST00000512617 TMTC2Q8N394 836 aa4.46□□□□□ -1.7
PVT1-202ENST00000512617 PMM1Q92871 262 aa4.46□□□□□ -1.7
PVT1-202ENST00000512617 UPF1Q92900 1129 aaKnown RBP eCLIP4.46□□□□□ -1.7
PVT1-202ENST00000512617 SGSM3Q96HU1 749 aa4.46□□□□□ -1.7
PVT1-202ENST00000512617 PKNOX2Q96KN3 472 aa4.46□□□□□ -1.7
PVT1-202ENST00000512617 SPOCK3Q9BQ16 436 aa4.46□□□□□ -1.7
PVT1-202ENST00000512617 HMX1Q9NP08 348 aaPredicted RBP4.46□□□□□ -1.7
PVT1-202ENST00000512617 NPDC1Q9NQX5 325 aaPredicted RBP4.46□□□□□ -1.7
PVT1-202ENST00000512617 SLAIN2Q9P270 581 aa4.46□□□□□ -1.7
PVT1-202ENST00000512617 COL4A3BPQ9Y5P4 624 aa4.46□□□□□ -1.7
PVT1-202ENST00000512617 USP17L15C9J2P7 530 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 USP17L10C9JJH3 530 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 USP17L13C9JLJ4 530 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 USP17L12C9JPN9 530 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 USP17L11C9JVI0 530 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 USP17L21D6R901 530 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 USP17L18D6R9N7 530 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 USP17L22D6RA61 530 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 USP17L17D6RBQ6 530 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 USP17L19D6RCP7 530 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 USP17L20D6RJB6 530 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 H3BRB1 525 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 SH3BP5O60239 455 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 ABL1P00519 1130 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 DNAJA1P31689 397 aaKnown RBP4.45□□□□□ -1.7
PVT1-202ENST00000512617 ZEB1P37275 1124 aaPredicted RBP4.45□□□□□ -1.7
PVT1-202ENST00000512617 USP17L24Q0WX57 530 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 FAM161AQ3B820 660 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 LONRF3Q496Y0 759 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 SOGA3Q5TF21 947 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 GLYCTKQ8IVS8 523 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 CCDC146Q8IYE0 955 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 TMEM87AQ8NBN3 555 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 FAM200AQ8TCP9 573 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 TRIM34Q9BYJ4 488 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 TGIF2Q9GZN2 237 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 TUT1Q9H6E5 874 aaKnown RBP4.45□□□□□ -1.7
PVT1-202ENST00000512617 GABBR1Q9UBS5 961 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 EGFL7Q9UHF1 273 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 DCTN4Q9UJW0 460 aa4.45□□□□□ -1.7
PVT1-202ENST00000512617 USP17L3A6NCW0 530 aa4.44□□□□□ -1.7
PVT1-202ENST00000512617 USP17L4A6NCW7 530 aa4.44□□□□□ -1.7
PVT1-202ENST00000512617 MOXD2PA6NHM9 499 aa4.44□□□□□ -1.7
PVT1-202ENST00000512617 FAM196BA6NMK8 535 aa4.44□□□□□ -1.7
PVT1-202ENST00000512617 MAP3K7O43318 606 aa4.44□□□□□ -1.7
PVT1-202ENST00000512617 PPFIA4O75335 1185 aa4.44□□□□□ -1.7
PVT1-202ENST00000512617 HSD3B2P26439 372 aa4.44□□□□□ -1.7
PVT1-202ENST00000512617 GJA5P36382 358 aa4.44□□□□□ -1.7
PVT1-202ENST00000512617 EIF4G2P78344 907 aaKnown RBP eCLIP4.44□□□□□ -1.72e-6■■■■□ 23.1
PVT1-202ENST00000512617 PLEKHG6Q3KR16 790 aa4.44□□□□□ -1.7
PVT1-202ENST00000512617 ZNF746Q6NUN9 644 aaPredicted RBP4.44□□□□□ -1.7
PVT1-202ENST00000512617 LARP1Q6PKG0 1096 aaKnown RBP4.44□□□□□ -1.7
PVT1-202ENST00000512617 USP17L2Q6R6M4 530 aa4.44□□□□□ -1.7
PVT1-202ENST00000512617 USP17L1Q7RTZ2 530 aa4.44□□□□□ -1.7
PVT1-202ENST00000512617 JAZF1Q86VZ6 243 aa4.44□□□□□ -1.7
PVT1-202ENST00000512617 PNMA1Q8ND90 353 aa4.44□□□□□ -1.7
PVT1-202ENST00000512617 CABLES1Q8TDN4 633 aa4.44□□□□□ -1.7
PVT1-202ENST00000512617 PXYLP1Q8TE99 480 aa4.44□□□□□ -1.7
PVT1-202ENST00000512617 OSBPL2Q9H1P3 480 aa4.44□□□□□ -1.7
PVT1-202ENST00000512617 DMGDHQ9UI17 866 aaKnown RBP4.44□□□□□ -1.7
PVT1-202ENST00000512617 PCDHB15Q9Y5E8 787 aa4.44□□□□□ -1.7
PVT1-202ENST00000512617 MAP3K13O43283 966 aa4.43□□□□□ -1.7
PVT1-202ENST00000512617 S100BP04271 92 aaPredicted RBP4.43□□□□□ -1.7
PVT1-202ENST00000512617 NDUFV2P19404 249 aa4.43□□□□□ -1.7
PVT1-202ENST00000512617 SCNN1AP37088 669 aa4.43□□□□□ -1.7
PVT1-202ENST00000512617 ZNF211Q13398 564 aaPredicted RBP4.43□□□□□ -1.7
PVT1-202ENST00000512617 ZFYVE27Q5T4F4 411 aa4.43□□□□□ -1.7
PVT1-202ENST00000512617 PRPF38BQ5VTL8 546 aaKnown RBP4.43□□□□□ -1.7
PVT1-202ENST00000512617 FILIP1Q7Z7B0 1213 aa4.43□□□□□ -1.7
PVT1-202ENST00000512617 METTL16Q86W50 562 aaKnown RBP4.43□□□□□ -1.7
PVT1-202ENST00000512617 REM2Q8IYK8 340 aaPredicted RBP4.43□□□□□ -1.7
PVT1-202ENST00000512617 NME8Q8N427 588 aa4.43□□□□□ -1.7
PVT1-202ENST00000512617 RNF34Q969K3 372 aa4.43□□□□□ -1.7
PVT1-202ENST00000512617 IRF2BPLQ9H1B7 796 aa4.43□□□□□ -1.7
PVT1-202ENST00000512617 MRS2Q9HD23 443 aa4.43□□□□□ -1.7
PVT1-202ENST00000512617 G3BP2Q9UN86 482 aaKnown RBP4.43□□□□□ -1.7
PVT1-202ENST00000512617 SCRIBQ14160 1630 aa4.43□□□□□ -1.7
PVT1-202ENST00000512617 HOXA2O43364 376 aa4.42□□□□□ -1.7
PVT1-202ENST00000512617 PAX3P23760 479 aa4.42□□□□□ -1.7
PVT1-202ENST00000512617 ITGAEP38570 1179 aa4.42□□□□□ -1.7
PVT1-202ENST00000512617 XPCQ01831 940 aaPredicted RBP4.42□□□□□ -1.7
PVT1-202ENST00000512617 EN1Q05925 392 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms