RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 FAM193AP78312 1265 aa8.25□□□□□ -1.09
TRAPPC11-209ENST00000512476 TBC1D9Q6ZT07 1266 aa8.25□□□□□ -1.09
TRAPPC11-209ENST00000512476 FILIP1Q7Z7B0 1213 aa8.25□□□□□ -1.09
TRAPPC11-209ENST00000512476 CHMP4BQ9H444 224 aaKnown RBP8.25□□□□□ -1.09
TRAPPC11-209ENST00000512476 NEFMP07197 916 aa8.25□□□□□ -1.09
TRAPPC11-209ENST00000512476 OSBPP22059 807 aa8.25□□□□□ -1.09
TRAPPC11-209ENST00000512476 PRR7Q8TB68 274 aa8.25□□□□□ -1.09
TRAPPC11-209ENST00000512476 NRBP1Q9UHY1 535 aa8.25□□□□□ -1.09
TRAPPC11-209ENST00000512476 CECR2Q9BXF3 1484 aa8.25□□□□□ -1.09
TRAPPC11-209ENST00000512476 EPB41L2O43491 1005 aaKnown RBP8.24□□□□□ -1.09
TRAPPC11-209ENST00000512476 DNAJA1P31689 397 aaKnown RBP8.24□□□□□ -1.09
TRAPPC11-209ENST00000512476 CBLBQ13191 982 aa8.24□□□□□ -1.09
TRAPPC11-209ENST00000512476 PPP1R18Q6NYC8 613 aa8.24□□□□□ -1.09
TRAPPC11-209ENST00000512476 ACBD3Q9H3P7 528 aa8.24□□□□□ -1.09
TRAPPC11-209ENST00000512476 GPCPD1Q9NPB8 672 aa8.24□□□□□ -1.09
TRAPPC11-209ENST00000512476 ZNF500O60304 480 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC11-209ENST00000512476 IBSPP21815 317 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC11-209ENST00000512476 MAP9Q49MG5 647 aa8.24□□□□□ -1.09
TRAPPC11-209ENST00000512476 TMC2Q8TDI7 906 aa8.24□□□□□ -1.09
TRAPPC11-209ENST00000512476 MS4A4AQ96JQ5 239 aa8.24□□□□□ -1.09
TRAPPC11-209ENST00000512476 ALG2Q9H553 416 aa8.24□□□□□ -1.09
TRAPPC11-209ENST00000512476 RNF19AQ9NV58 838 aa8.24□□□□□ -1.09
TRAPPC11-209ENST00000512476 ATP2B1P20020 1258 aa8.23□□□□□ -1.09
TRAPPC11-209ENST00000512476 JDP2Q8WYK2 163 aa8.23□□□□□ -1.09
TRAPPC11-209ENST00000512476 GJD4Q96KN9 370 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC11-209ENST00000512476 RSF1Q96T23 1441 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC11-209ENST00000512476 QPCTQ16769 361 aa8.23□□□□□ -1.09
TRAPPC11-209ENST00000512476 SLFNL1Q499Z3 407 aa8.23□□□□□ -1.09
TRAPPC11-209ENST00000512476 TSR2Q969E8 191 aaKnown RBP8.23□□□□□ -1.09
TRAPPC11-209ENST00000512476 CAPN10Q9HC96 672 aa8.23□□□□□ -1.09
TRAPPC11-209ENST00000512476 DDX56Q9NY93 547 aaKnown RBP8.23□□□□□ -1.09
TRAPPC11-209ENST00000512476 MAP3K20Q9NYL2 800 aaKnown RBP8.23□□□□□ -1.09
TRAPPC11-209ENST00000512476 CCDC61Q9Y6R9 512 aa8.23□□□□□ -1.09
TRAPPC11-209ENST00000512476 FAM161AQ3B820 660 aa8.22□□□□□ -1.09
TRAPPC11-209ENST00000512476 ZNF746Q6NUN9 644 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC11-209ENST00000512476 MKRN1Q9UHC7 482 aaKnown RBP8.22□□□□□ -1.09
TRAPPC11-209ENST00000512476 DEKP35659 375 aaKnown RBP8.22□□□□□ -1.09
TRAPPC11-209ENST00000512476 MRPL58Q14197 206 aaKnown RBP8.22□□□□□ -1.09
TRAPPC11-209ENST00000512476 CSPP1Q1MSJ5 1256 aa8.22□□□□□ -1.09
TRAPPC11-209ENST00000512476 TMEM259Q4ZIN3 620 aa8.21□□□□□ -1.1
TRAPPC11-209ENST00000512476 ANO2Q9NQ90 1003 aa8.21□□□□□ -1.1
TRAPPC11-209ENST00000512476 TTF2Q9UNY4 1162 aaKnown RBP8.21□□□□□ -1.1
TRAPPC11-209ENST00000512476 ERBB3P21860 1342 aa8.21□□□□□ -1.1
TRAPPC11-209ENST00000512476 PPP1R15BQ5SWA1 713 aa8.21□□□□□ -1.1
TRAPPC11-209ENST00000512476 PPP2R2DQ66LE6 453 aa8.21□□□□□ -1.1
TRAPPC11-209ENST00000512476 IPO4Q8TEX9 1081 aaKnown RBP8.21□□□□□ -1.1
TRAPPC11-209ENST00000512476 CFAP69A5D8W1 941 aa8.2□□□□□ -1.1
TRAPPC11-209ENST00000512476 PPP1R3GB7ZBB8 358 aa8.2□□□□□ -1.1
TRAPPC11-209ENST00000512476 S100BP04271 92 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC11-209ENST00000512476 CLCN1P35523 988 aa8.2□□□□□ -1.1
TRAPPC11-209ENST00000512476 KANK4Q5T7N3 995 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC11-209ENST00000512476 HMX1Q9NP08 348 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC11-209ENST00000512476 KLF15Q9UIH9 416 aa8.2□□□□□ -1.1
TRAPPC11-209ENST00000512476 FBXO9Q9UK97 447 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC11-209ENST00000512476 THRAP3Q9Y2W1 955 aaKnown RBP8.2□□□□□ -1.1
TRAPPC11-209ENST00000512476 MROH2BQ7Z745 1585 aa8.2□□□□□ -1.1
TRAPPC11-209ENST00000512476 EXOC5O00471 708 aa8.2□□□□□ -1.1
TRAPPC11-209ENST00000512476 FCHSD2O94868 740 aa8.2□□□□□ -1.1
TRAPPC11-209ENST00000512476 CHST12Q9NRB3 414 aa8.2□□□□□ -1.1
TRAPPC11-209ENST00000512476 FAM217BQ9NTX9 383 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC11-209ENST00000512476 COMMD10Q9Y6G5 202 aa8.2□□□□□ -1.1
TRAPPC11-209ENST00000512476 BAZ1AQ9NRL2 1556 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC11-209ENST00000512476 SCAMP3O14828 347 aaKnown RBP8.19□□□□□ -1.1
TRAPPC11-209ENST00000512476 SOX12O15370 315 aa8.19□□□□□ -1.1
TRAPPC11-209ENST00000512476 AMPD3Q01432 767 aa8.19□□□□□ -1.1
TRAPPC11-209ENST00000512476 PTGDRQ13258 359 aa8.19□□□□□ -1.1
TRAPPC11-209ENST00000512476 IL17RAQ96F46 866 aa8.19□□□□□ -1.1
TRAPPC11-209ENST00000512476 WWC3Q9ULE0 1092 aa8.19□□□□□ -1.1
TRAPPC11-209ENST00000512476 AP1G2O75843 785 aa8.18□□□□□ -1.1
TRAPPC11-209ENST00000512476 GET4Q7L5D6 327 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC11-209ENST00000512476 SPC25Q9HBM1 224 aa8.18□□□□□ -1.1
TRAPPC11-209ENST00000512476 NLRP6P59044 892 aa8.18□□□□□ -1.1
TRAPPC11-209ENST00000512476 ENOX2Q16206 610 aaKnown RBP8.18□□□□□ -1.1
TRAPPC11-209ENST00000512476 AMOTL1Q8IY63 956 aa8.18□□□□□ -1.1
TRAPPC11-209ENST00000512476 ZNF512BQ96KM6 892 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC11-209ENST00000512476 NDUFV2P19404 249 aa8.17□□□□□ -1.1
TRAPPC11-209ENST00000512476 PSEN1P49768 467 aa8.17□□□□□ -1.1
TRAPPC11-209ENST00000512476 IER2Q9BTL4 223 aa8.17□□□□□ -1.1
TRAPPC11-209ENST00000512476 CABP2Q9NPB3 220 aa8.17□□□□□ -1.1
TRAPPC11-209ENST00000512476 FAM69CQ0P6D2 419 aa8.17□□□□□ -1.1
TRAPPC11-209ENST00000512476 ZNF211Q13398 564 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC11-209ENST00000512476 B4GALNT3Q6L9W6 998 aa8.17□□□□□ -1.1
TRAPPC11-209ENST00000512476 CREBRFQ8IUR6 639 aa8.17□□□□□ -1.1
TRAPPC11-209ENST00000512476 FTSJ3Q8IY81 847 aaKnown RBP8.17□□□□□ -1.1
TRAPPC11-209ENST00000512476 MPHOSPH6Q99547 160 aaKnown RBP8.17□□□□□ -1.1
TRAPPC11-209ENST00000512476 POLD1P28340 1107 aa8.16□□□□□ -1.1
TRAPPC11-209ENST00000512476 SDR16C5Q8N3Y7 309 aa8.16□□□□□ -1.1
TRAPPC11-209ENST00000512476 SMARCA4P51532 1647 aa8.16□□□□□ -1.1
TRAPPC11-209ENST00000512476 STK10O94804 968 aaKnown RBP8.15□□□□□ -1.1
TRAPPC11-209ENST00000512476 WDR78Q5VTH9 848 aa8.15□□□□□ -1.1
TRAPPC11-209ENST00000512476 SLC39A13Q96H72 371 aa8.15□□□□□ -1.1
TRAPPC11-209ENST00000512476 SFMBT1Q9UHJ3 866 aa8.15□□□□□ -1.1
TRAPPC11-209ENST00000512476 USP17L8P0C7I0 530 aa8.15□□□□□ -1.1
TRAPPC11-209ENST00000512476 USP5P45974 858 aa8.15□□□□□ -1.1
TRAPPC11-209ENST00000512476 TSC1Q92574 1164 aa8.15□□□□□ -1.1
TRAPPC11-209ENST00000512476 DDX12PQ92771 950 aa8.15□□□□□ -1.1
TRAPPC11-209ENST00000512476 NOVA2Q9UNW9 492 aaKnown RBP8.15□□□□□ -1.1
TRAPPC11-209ENST00000512476 RBL2Q08999 1139 aa8.14□□□□□ -1.11
TRAPPC11-209ENST00000512476 ARHGEF10LQ9HCE6 1279 aa8.14□□□□□ -1.11
TRAPPC11-209ENST00000512476 RNF187Q5TA31 235 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms