RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 TOPAZ1Q8N9V7 1692 aa21.31■■□□□ 1
CCHCR1-229ENST00000512418 SEPT12Q8IYM1 358 aa21.3■■□□□ 1
CCHCR1-229ENST00000512418 CDK19Q9BWU1 502 aa21.3■■□□□ 1
CCHCR1-229ENST00000512418 ONECUT3O60422 494 aaPredicted RBP21.29■■□□□ 1
CCHCR1-229ENST00000512418 NBPF1Q3BBV0 1214 aa21.29■■□□□ 1
CCHCR1-229ENST00000512418 BTG4Q9NY30 223 aa21.28■■□□□ 1
CCHCR1-229ENST00000512418 BLMP54132 1417 aaPredicted RBP21.28■■□□□ 1
CCHCR1-229ENST00000512418 POLR3AO14802 1390 aaPredicted RBP21.27■■□□□ 1
CCHCR1-229ENST00000512418 CCDC61Q9Y6R9 512 aa21.27■■□□□ 1
CCHCR1-229ENST00000512418 KRT27Q7Z3Y8 459 aa21.24■□□□□ 0.99
CCHCR1-229ENST00000512418 PRDM11Q9NQV5 511 aa21.24■□□□□ 0.99
CCHCR1-229ENST00000512418 PHRF1Q9P1Y6 1649 aaKnown RBP21.24■□□□□ 0.99
CCHCR1-229ENST00000512418 ACEP12821 1306 aa21.24■□□□□ 0.99
CCHCR1-229ENST00000512418 CENPJQ9HC77 1338 aaPredicted RBP21.24■□□□□ 0.99
CCHCR1-229ENST00000512418 PLEKHG3A1L390 1219 aa21.23■□□□□ 0.99
CCHCR1-229ENST00000512418 SRCAPQ6ZRS2 3230 aa21.22■□□□□ 0.99
CCHCR1-229ENST00000512418 A0A0G2JS52 829 aa21.22■□□□□ 0.99
CCHCR1-229ENST00000512418 MYT1Q01538 1121 aa21.22■□□□□ 0.99
CCHCR1-229ENST00000512418 NBPF8Q3BBV2 869 aa21.22■□□□□ 0.99
CCHCR1-229ENST00000512418 ZRANB1Q9UGI0 708 aa21.22■□□□□ 0.99
CCHCR1-229ENST00000512418 FAM98CQ17RN3 349 aaKnown RBP21.21■□□□□ 0.99
CCHCR1-229ENST00000512418 QRICH2Q9H0J4 1663 aa21.21■□□□□ 0.99
CCHCR1-229ENST00000512418 KIAA0232Q92628 1395 aa21.21■□□□□ 0.99
CCHCR1-229ENST00000512418 SRPK2P78362 688 aaKnown RBP21.2■□□□□ 0.98
CCHCR1-229ENST00000512418 L3MBTL2Q969R5 705 aa21.2■□□□□ 0.98
CCHCR1-229ENST00000512418 SF3B2Q13435 895 aaKnown RBP21.19■□□□□ 0.98
CCHCR1-229ENST00000512418 SPATA31A5Q5VU36 1347 aa21.19■□□□□ 0.98
CCHCR1-229ENST00000512418 SPATA31A7Q8IWB4 1347 aa21.19■□□□□ 0.98
CCHCR1-229ENST00000512418 PPIP5K1Q6PFW1 1433 aa21.19■□□□□ 0.98
CCHCR1-229ENST00000512418 NUTM2GQ5VZR2 741 aa21.17■□□□□ 0.98
CCHCR1-229ENST00000512418 TRPM1Q7Z4N2 1603 aa21.17■□□□□ 0.98
CCHCR1-229ENST00000512418 NRKQ7Z2Y5 1582 aa21.16■□□□□ 0.98
CCHCR1-229ENST00000512418 THSD7AQ9UPZ6 1657 aa21.15■□□□□ 0.98
CCHCR1-229ENST00000512418 ZC3H6P61129 1189 aaKnown RBP21.15■□□□□ 0.98
CCHCR1-229ENST00000512418 CHRNA2Q15822 529 aa21.15■□□□□ 0.98
CCHCR1-229ENST00000512418 DEFB132Q7Z7B7 95 aa21.15■□□□□ 0.98
CCHCR1-229ENST00000512418 ABTB2Q8N961 1025 aa21.15■□□□□ 0.98
CCHCR1-229ENST00000512418 SIN3AQ96ST3 1273 aa21.15■□□□□ 0.98
CCHCR1-229ENST00000512418 CABP2Q9NPB3 220 aa21.15■□□□□ 0.98
CCHCR1-229ENST00000512418 BRD4O60885 1362 aaPredicted RBP21.13■□□□□ 0.97
CCHCR1-229ENST00000512418 USP19O94966 1318 aa21.13■□□□□ 0.97
CCHCR1-229ENST00000512418 CPDO75976 1380 aa21.12■□□□□ 0.97
CCHCR1-229ENST00000512418 SPATA31A1Q5TZJ5 1347 aa21.12■□□□□ 0.97
CCHCR1-229ENST00000512418 STRN4Q9NRL3 753 aa21.12■□□□□ 0.97
CCHCR1-229ENST00000512418 ROCK2O75116 1388 aaKnown RBP21.1■□□□□ 0.97
CCHCR1-229ENST00000512418 NEUROD1Q13562 356 aa21.1■□□□□ 0.97
CCHCR1-229ENST00000512418 NLRP13Q86W25 1043 aa21.1■□□□□ 0.97
CCHCR1-229ENST00000512418 USP6P35125 1406 aa21.1■□□□□ 0.97
CCHCR1-229ENST00000512418 SSH2Q76I76 1423 aa21.1■□□□□ 0.97
CCHCR1-229ENST00000512418 EVC2Q86UK5 1308 aa21.09■□□□□ 0.97
CCHCR1-229ENST00000512418 LMO7Q8WWI1 1683 aa21.09■□□□□ 0.97
CCHCR1-229ENST00000512418 BAG6P46379 1132 aa21.09■□□□□ 0.97
CCHCR1-229ENST00000512418 CABP1Q9NZU7 370 aa21.09■□□□□ 0.97
CCHCR1-229ENST00000512418 RGPD1P0DJD0 1748 aa21.09■□□□□ 0.97
CCHCR1-229ENST00000512418 CAMTA1Q9Y6Y1 1673 aa21.08■□□□□ 0.96
CCHCR1-229ENST00000512418 GCP02774 474 aa21.07■□□□□ 0.96
CCHCR1-229ENST00000512418 EVA1CP58658 441 aa21.07■□□□□ 0.96
CCHCR1-229ENST00000512418 FAM182BQ5T319 152 aa21.05■□□□□ 0.96
CCHCR1-229ENST00000512418 BARGINQ6ZT62 677 aa21.04■□□□□ 0.96
CCHCR1-229ENST00000512418 USP35Q9P2H5 1018 aa21.04■□□□□ 0.96
CCHCR1-229ENST00000512418 SLIT3O75094 1523 aa21.04■□□□□ 0.96
CCHCR1-229ENST00000512418 LARP1Q6PKG0 1096 aaKnown RBP21.03■□□□□ 0.96
CCHCR1-229ENST00000512418 TNS1Q9HBL0 1735 aaKnown RBP21.03■□□□□ 0.96
CCHCR1-229ENST00000512418 DISP2A7MBM2 1401 aa21.03■□□□□ 0.96
CCHCR1-229ENST00000512418 PIK3C2AO00443 1686 aa21.02■□□□□ 0.96
CCHCR1-229ENST00000512418 COL5A2P05997 1499 aaPredicted RBP21.02■□□□□ 0.96
CCHCR1-229ENST00000512418 NLRP6P59044 892 aa21.02■□□□□ 0.96
CCHCR1-229ENST00000512418 FAM196AQ6ZSG2 479 aa21.01■□□□□ 0.95
CCHCR1-229ENST00000512418 TCP11L2Q8N4U5 519 aa21■□□□□ 0.95
CCHCR1-229ENST00000512418 THRAP3Q9Y2W1 955 aaKnown RBP21■□□□□ 0.95
CCHCR1-229ENST00000512418 AKAP12Q02952 1782 aa21■□□□□ 0.95
CCHCR1-229ENST00000512418 SBNO2Q9Y2G9 1366 aa20.99■□□□□ 0.95
CCHCR1-229ENST00000512418 EN1Q05925 392 aaPredicted RBP20.99■□□□□ 0.95
CCHCR1-229ENST00000512418 ZNF692Q9BU19 519 aaPredicted RBP20.99■□□□□ 0.95
CCHCR1-229ENST00000512418 AATKQ6ZMQ8 1374 aa20.98■□□□□ 0.95
CCHCR1-229ENST00000512418 PDE3BQ13370 1112 aa20.97■□□□□ 0.95
CCHCR1-229ENST00000512418 CRB1P82279 1406 aa20.96■□□□□ 0.95
CCHCR1-229ENST00000512418 TTC21BQ7Z4L5 1316 aa20.96■□□□□ 0.95
CCHCR1-229ENST00000512418 TTC21AQ8NDW8 1320 aa20.96■□□□□ 0.95
CCHCR1-229ENST00000512418 CPSF1Q10570 1443 aaKnown RBP20.95■□□□□ 0.95
CCHCR1-229ENST00000512418 PARP4Q9UKK3 1724 aaKnown RBP20.95■□□□□ 0.94
CCHCR1-229ENST00000512418 ZBTB7CA1YPR0 619 aa20.95■□□□□ 0.94
CCHCR1-229ENST00000512418 TRIM37O94972 964 aa20.95■□□□□ 0.94
CCHCR1-229ENST00000512418 LRP5O75197 1615 aa20.95■□□□□ 0.94
CCHCR1-229ENST00000512418 TONSLQ96HA7 1378 aa20.95■□□□□ 0.94
CCHCR1-229ENST00000512418 CARD11Q9BXL7 1154 aa20.94■□□□□ 0.94
CCHCR1-229ENST00000512418 COL18A1P39060 1754 aa20.94■□□□□ 0.94
CCHCR1-229ENST00000512418 KCNH5Q8NCM2 988 aa20.93■□□□□ 0.94
CCHCR1-229ENST00000512418 KTN1Q86UP2 1357 aaKnown RBP20.93■□□□□ 0.94
CCHCR1-229ENST00000512418 PARD3Q8TEW0 1356 aa20.93■□□□□ 0.94
CCHCR1-229ENST00000512418 PSDA5PKW4 1024 aaPredicted RBP20.92■□□□□ 0.94
CCHCR1-229ENST00000512418 MON2Q7Z3U7 1717 aa20.92■□□□□ 0.94
CCHCR1-229ENST00000512418 EZH2Q15910 746 aaKnown RBP20.91■□□□□ 0.94
CCHCR1-229ENST00000512418 APBA3O96018 575 aa20.9■□□□□ 0.94
CCHCR1-229ENST00000512418 ARHGEF25Q86VW2 580 aa20.9■□□□□ 0.94
CCHCR1-229ENST00000512418 CAMKK2Q96RR4 588 aa20.9■□□□□ 0.94
CCHCR1-229ENST00000512418 WDR17Q8IZU2 1322 aa20.89■□□□□ 0.93
CCHCR1-229ENST00000512418 TOM1L2Q6ZVM7 507 aa20.89■□□□□ 0.93
CCHCR1-229ENST00000512418 LRRC37A3O60309 1634 aa20.89■□□□□ 0.93
CCHCR1-229ENST00000512418 NFAT5O94916 1531 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms