RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 EIF4G2P78344 907 aaKnown RBP eCLIP24.22■■□□□ 1.47
CLDND1-221ENST00000510541 ABCA3Q99758 1704 aa24.21■■□□□ 1.47
CLDND1-221ENST00000510541 TTC21AQ8NDW8 1320 aa24.21■■□□□ 1.47
CLDND1-221ENST00000510541 MEX3CQ5U5Q3 659 aaKnown RBP24.21■■□□□ 1.47
CLDND1-221ENST00000510541 CD163L1Q9NR16 1453 aa24.2■■□□□ 1.47
CLDND1-221ENST00000510541 USP19O94966 1318 aa24.19■■□□□ 1.46
CLDND1-221ENST00000510541 NUTM2BA6NNL0 878 aaPredicted RBP24.19■■□□□ 1.46
CLDND1-221ENST00000510541 NUTM2EB1AL46 878 aaPredicted RBP24.19■■□□□ 1.46
CLDND1-221ENST00000510541 NUTM2AQ8IVF1 878 aaPredicted RBP24.19■■□□□ 1.46
CLDND1-221ENST00000510541 MON2Q7Z3U7 1717 aa24.18■■□□□ 1.46
CLDND1-221ENST00000510541 TERF2IPQ9NYB0 399 aa24.18■■□□□ 1.46
CLDND1-221ENST00000510541 NRKQ7Z2Y5 1582 aa24.17■■□□□ 1.46
CLDND1-221ENST00000510541 SLIT2O94813 1529 aa24.16■■□□□ 1.46
CLDND1-221ENST00000510541 NLRP13Q86W25 1043 aa24.16■■□□□ 1.46
CLDND1-221ENST00000510541 EDC4Q6P2E9 1401 aaKnown RBP24.15■■□□□ 1.46
CLDND1-221ENST00000510541 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.15■■□□□ 1.46
CLDND1-221ENST00000510541 USP54Q70EL1 1684 aa24.15■■□□□ 1.46
CLDND1-221ENST00000510541 AFF2P51816 1311 aa24.14■■□□□ 1.46
CLDND1-221ENST00000510541 PAK3O75914 559 aaPredicted RBP24.14■■□□□ 1.45
CLDND1-221ENST00000510541 HDGFL2Q7Z4V5 671 aaPredicted RBP24.14■■□□□ 1.45
CLDND1-221ENST00000510541 ABTB2Q8N961 1025 aa24.14■■□□□ 1.45
CLDND1-221ENST00000510541 KTN1Q86UP2 1357 aaKnown RBP24.14■■□□□ 1.45
CLDND1-221ENST00000510541 CDK12Q9NYV4 1490 aaPredicted RBP24.13■■□□□ 1.45
CLDND1-221ENST00000510541 TTC21BQ7Z4L5 1316 aa24.13■■□□□ 1.45
CLDND1-221ENST00000510541 NWD2Q9ULI1 1742 aa24.13■■□□□ 1.45
CLDND1-221ENST00000510541 NGLY1Q96IV0 654 aa24.13■■□□□ 1.45
CLDND1-221ENST00000510541 CPDO75976 1380 aa24.13■■□□□ 1.45
CLDND1-221ENST00000510541 USP31Q70CQ4 1352 aa24.13■■□□□ 1.45
CLDND1-221ENST00000510541 ANKRD36BQ8N2N9 1353 aa24.13■■□□□ 1.45
CLDND1-221ENST00000510541 C8orf37Q96NL8 207 aa24.12■■□□□ 1.45
CLDND1-221ENST00000510541 SLC12A5Q9H2X9 1139 aa24.12■■□□□ 1.45
CLDND1-221ENST00000510541 BCL9LQ86UU0 1499 aa24.12■■□□□ 1.45
CLDND1-221ENST00000510541 SLIT3O75094 1523 aa24.11■■□□□ 1.45
CLDND1-221ENST00000510541 PHRF1Q9P1Y6 1649 aaKnown RBP24.11■■□□□ 1.45
CLDND1-221ENST00000510541 ADAMTS2O95450 1211 aa24.11■■□□□ 1.45
CLDND1-221ENST00000510541 LMOD2Q6P5Q4 547 aa24.11■■□□□ 1.45
CLDND1-221ENST00000510541 POTEAQ6S8J7 498 aa24.11■■□□□ 1.45
CLDND1-221ENST00000510541 A0A1W2PP64 1363 aa24.1■■□□□ 1.45
CLDND1-221ENST00000510541 PIK3C2AO00443 1686 aa24.09■■□□□ 1.45
CLDND1-221ENST00000510541 HSPA5P11021 654 aaKnown RBP24.09■■□□□ 1.45
CLDND1-221ENST00000510541 COL14A1Q05707 1796 aaKnown RBP24.08■■□□□ 1.45
CLDND1-221ENST00000510541 CABLES1Q8TDN4 633 aa24.08■■□□□ 1.45
CLDND1-221ENST00000510541 ATRNO75882 1429 aa24.08■■□□□ 1.44
CLDND1-221ENST00000510541 HAP1P54257 671 aaPredicted RBP24.07■■□□□ 1.44
CLDND1-221ENST00000510541 TMC1Q8TDI8 760 aa24.07■■□□□ 1.44
CLDND1-221ENST00000510541 USP21Q9UK80 565 aa24.07■■□□□ 1.44
CLDND1-221ENST00000510541 TRPC5Q9UL62 973 aaPredicted RBP24.07■■□□□ 1.44
CLDND1-221ENST00000510541 ILDR2Q71H61 639 aa24.06■■□□□ 1.44
CLDND1-221ENST00000510541 UNC5CLQ8IV45 518 aa24.06■■□□□ 1.44
CLDND1-221ENST00000510541 GCP02774 474 aa24.05■■□□□ 1.44
CLDND1-221ENST00000510541 KCNH5Q8NCM2 988 aa24.05■■□□□ 1.44
CLDND1-221ENST00000510541 FAM83GA6ND36 823 aa24.04■■□□□ 1.44
CLDND1-221ENST00000510541 NLRP6P59044 892 aa24.04■■□□□ 1.44
CLDND1-221ENST00000510541 RBM6P78332 1123 aaKnown RBP24.04■■□□□ 1.44
CLDND1-221ENST00000510541 QTRT2Q9H974 415 aaKnown RBP24.04■■□□□ 1.44
CLDND1-221ENST00000510541 ABCC6O95255 1503 aa24.04■■□□□ 1.44
CLDND1-221ENST00000510541 MYOM1P52179 1685 aa24.02■■□□□ 1.44
CLDND1-221ENST00000510541 PLCH1Q4KWH8 1693 aa24.02■■□□□ 1.44
CLDND1-221ENST00000510541 RXRBP28702 533 aa24.01■■□□□ 1.43
CLDND1-221ENST00000510541 VPS72Q15906 364 aa24■■□□□ 1.43
CLDND1-221ENST00000510541 KIAA0232Q92628 1395 aa24■■□□□ 1.43
CLDND1-221ENST00000510541 PRDM11Q9NQV5 511 aa23.99■■□□□ 1.43
CLDND1-221ENST00000510541 AATKQ6ZMQ8 1374 aa23.99■■□□□ 1.43
CLDND1-221ENST00000510541 OVOS2A0A0J9YW53 1432 aa23.99■■□□□ 1.43
CLDND1-221ENST00000510541 OVOS2Q6IE36 1432 aa23.99■■□□□ 1.43
CLDND1-221ENST00000510541 LMO7Q8WWI1 1683 aa23.99■■□□□ 1.43
CLDND1-221ENST00000510541 NRAPQ86VF7 1730 aa23.98■■□□□ 1.43
CLDND1-221ENST00000510541 NFAT5O94916 1531 aa23.97■■□□□ 1.43
CLDND1-221ENST00000510541 ONECUT3O60422 494 aaPredicted RBP23.96■■□□□ 1.43
CLDND1-221ENST00000510541 GJD4Q96KN9 370 aaPredicted RBP23.96■■□□□ 1.43
CLDND1-221ENST00000510541 NUTM2GQ5VZR2 741 aa23.95■■□□□ 1.42
CLDND1-221ENST00000510541 ARHGEF25Q86VW2 580 aa23.95■■□□□ 1.42
CLDND1-221ENST00000510541 SOCS7O14512 581 aa23.93■■□□□ 1.42
CLDND1-221ENST00000510541 BTG4Q9NY30 223 aa23.93■■□□□ 1.42
CLDND1-221ENST00000510541 NME9Q86XW9 330 aa23.92■■□□□ 1.42
CLDND1-221ENST00000510541 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.92■■□□□ 1.42
CLDND1-221ENST00000510541 COL18A1P39060 1754 aa23.92■■□□□ 1.42
CLDND1-221ENST00000510541 FYB1O15117 783 aa23.91■■□□□ 1.42
CLDND1-221ENST00000510541 ZC3H6P61129 1189 aaKnown RBP23.91■■□□□ 1.42
CLDND1-221ENST00000510541 CAMTA1Q9Y6Y1 1673 aa23.9■■□□□ 1.42
CLDND1-221ENST00000510541 CARD14Q9BXL6 1004 aa23.9■■□□□ 1.42
CLDND1-221ENST00000510541 GLI3P10071 1580 aa23.9■■□□□ 1.42
CLDND1-221ENST00000510541 C11orf95C9JLR9 678 aaPredicted RBP23.88■■□□□ 1.41
CLDND1-221ENST00000510541 COG3Q96JB2 828 aa23.88■■□□□ 1.41
CLDND1-221ENST00000510541 SPATA31A5Q5VU36 1347 aa23.87■■□□□ 1.41
CLDND1-221ENST00000510541 SPATA31A7Q8IWB4 1347 aa23.87■■□□□ 1.41
CLDND1-221ENST00000510541 COL5A2P05997 1499 aaPredicted RBP23.87■■□□□ 1.41
CLDND1-221ENST00000510541 CGNL1Q0VF96 1302 aa23.86■■□□□ 1.41
CLDND1-221ENST00000510541 KIF7Q2M1P5 1343 aa23.86■■□□□ 1.41
CLDND1-221ENST00000510541 KIF24Q5T7B8 1368 aa23.86■■□□□ 1.41
CLDND1-221ENST00000510541 RGS12O14924 1447 aa23.85■■□□□ 1.41
CLDND1-221ENST00000510541 THRAP3Q9Y2W1 955 aaKnown RBP23.85■■□□□ 1.41
CLDND1-221ENST00000510541 NSD2O96028 1365 aa23.85■■□□□ 1.41
CLDND1-221ENST00000510541 NSD3Q9BZ95 1437 aa23.84■■□□□ 1.41
CLDND1-221ENST00000510541 ZEB1P37275 1124 aaPredicted RBP23.84■■□□□ 1.41
CLDND1-221ENST00000510541 CHRNA2Q15822 529 aa23.84■■□□□ 1.41
CLDND1-221ENST00000510541 KIF20BQ96Q89 1820 aa23.84■■□□□ 1.41
CLDND1-221ENST00000510541 SPATA31A1Q5TZJ5 1347 aa23.84■■□□□ 1.41
CLDND1-221ENST00000510541 BARGINQ6ZT62 677 aa23.83■■□□□ 1.41
CLDND1-221ENST00000510541 BLMP54132 1417 aaPredicted RBP23.83■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms