RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 ADGRB1O14514 1584 aa15.25■□□□□ 0.03
DDX41-211ENST00000510171 NUDT16Q96DE0 195 aaKnown RBP15.25■□□□□ 0.03
DDX41-211ENST00000510171 NWD2Q9ULI1 1742 aa15.24■□□□□ 0.03
DDX41-211ENST00000510171 HRCP23327 699 aa15.24■□□□□ 0.03
DDX41-211ENST00000510171 RGPD8O14715 1765 aaPredicted RBP15.23■□□□□ 0.03
DDX41-211ENST00000510171 ADGRB2O60241 1585 aa15.23■□□□□ 0.03
DDX41-211ENST00000510171 TULP4Q9NRJ4 1543 aa15.22■□□□□ 0.03
DDX41-211ENST00000510171 CHRNA2Q15822 529 aa15.22■□□□□ 0.03
DDX41-211ENST00000510171 STRN4Q9NRL3 753 aa15.22■□□□□ 0.03
DDX41-211ENST00000510171 PLCH1Q4KWH8 1693 aa15.22■□□□□ 0.03
DDX41-211ENST00000510171 BRWD3Q6RI45 1802 aa15.22■□□□□ 0.03
DDX41-211ENST00000510171 SPATA31A1Q5TZJ5 1347 aa15.21■□□□□ 0.03
DDX41-211ENST00000510171 EVA1CP58658 441 aa15.21■□□□□ 0.03
DDX41-211ENST00000510171 ZC3H6P61129 1189 aaKnown RBP15.21■□□□□ 0.03
DDX41-211ENST00000510171 CDK19Q9BWU1 502 aa15.21■□□□□ 0.03
DDX41-211ENST00000510171 KIAA0232Q92628 1395 aa15.21■□□□□ 0.02
DDX41-211ENST00000510171 R3HDM1Q15032 1099 aaKnown RBP15.2■□□□□ 0.02
DDX41-211ENST00000510171 NUTM2GQ5VZR2 741 aa15.2■□□□□ 0.02
DDX41-211ENST00000510171 FAM196AQ6ZSG2 479 aa15.2■□□□□ 0.02
DDX41-211ENST00000510171 EZH2Q15910 746 aaKnown RBP15.19■□□□□ 0.02
DDX41-211ENST00000510171 NBPF8Q3BBV2 869 aa15.19■□□□□ 0.02
DDX41-211ENST00000510171 CCDC61Q9Y6R9 512 aa15.19■□□□□ 0.02
DDX41-211ENST00000510171 TRIM37O94972 964 aa15.18■□□□□ 0.02
DDX41-211ENST00000510171 USP35Q9P2H5 1018 aa15.18■□□□□ 0.02
DDX41-211ENST00000510171 COL14A1Q05707 1796 aaKnown RBP15.18■□□□□ 0.02
DDX41-211ENST00000510171 ACEP12821 1306 aa15.17■□□□□ 0.02
DDX41-211ENST00000510171 ABCA3Q99758 1704 aa15.17■□□□□ 0.02
DDX41-211ENST00000510171 TRPM3Q9HCF6 1732 aaPredicted RBP15.17■□□□□ 0.02
DDX41-211ENST00000510171 PLEKHG3A1L390 1219 aa15.17■□□□□ 0.02
DDX41-211ENST00000510171 APBA3O96018 575 aa15.17■□□□□ 0.02
DDX41-211ENST00000510171 PDE3BQ13370 1112 aa15.17■□□□□ 0.02
DDX41-211ENST00000510171 CAMKK2Q96RR4 588 aa15.17■□□□□ 0.02
DDX41-211ENST00000510171 BARGINQ6ZT62 677 aa15.16■□□□□ 0.02
DDX41-211ENST00000510171 ABTB2Q8N961 1025 aa15.16■□□□□ 0.02
DDX41-211ENST00000510171 DISP2A7MBM2 1401 aa15.16■□□□□ 0.02
DDX41-211ENST00000510171 ALS2Q96Q42 1657 aa15.16■□□□□ 0.02
DDX41-211ENST00000510171 NRAPQ86VF7 1730 aa15.15■□□□□ 0.02
DDX41-211ENST00000510171 ATP7BP35670 1465 aa15.14■□□□□ 0.01
DDX41-211ENST00000510171 POLR3AO14802 1390 aaPredicted RBP15.14■□□□□ 0.01
DDX41-211ENST00000510171 LARP1Q6PKG0 1096 aaKnown RBP15.14■□□□□ 0.01
DDX41-211ENST00000510171 TCP11L2Q8N4U5 519 aa15.13■□□□□ 0.01
DDX41-211ENST00000510171 LRP5O75197 1615 aa15.13■□□□□ 0.01
DDX41-211ENST00000510171 GCP02774 474 aa15.12■□□□□ 0.01
DDX41-211ENST00000510171 NLRP13Q86W25 1043 aa15.12■□□□□ 0.01
DDX41-211ENST00000510171 PARD3Q8TEW0 1356 aa15.11■□□□□ 0.01
DDX41-211ENST00000510171 SSH2Q76I76 1423 aa15.11■□□□□ 0.01
DDX41-211ENST00000510171 SRPK2P78362 688 aaKnown RBP15.11■□□□□ 0.01
DDX41-211ENST00000510171 NBPF1Q3BBV0 1214 aa15.11■□□□□ 0.01
DDX41-211ENST00000510171 THRAP3Q9Y2W1 955 aaKnown RBP15.11■□□□□ 0.01
DDX41-211ENST00000510171 THSD7AQ9UPZ6 1657 aa15.1■□□□□ 0.01
DDX41-211ENST00000510171 NBPF14Q5TI25 921 aa15.1■□□□□ 0.01
DDX41-211ENST00000510171 CPDO75976 1380 aa15.1■□□□□ 0.01
DDX41-211ENST00000510171 USP19O94966 1318 aa15.09■□□□□ 0.01
DDX41-211ENST00000510171 CABP2Q9NPB3 220 aa15.08■□□□□ 0
DDX41-211ENST00000510171 RGPD1P0DJD0 1748 aa15.07■□□□□ 0
DDX41-211ENST00000510171 C11orf95C9JLR9 678 aaPredicted RBP15.07■□□□□ 0
DDX41-211ENST00000510171 CAMTA1Q9Y6Y1 1673 aa15.06■□□□□ 0
DDX41-211ENST00000510171 CABP1Q9NZU7 370 aa15.06■□□□□ 0
DDX41-211ENST00000510171 CENPJQ9HC77 1338 aaPredicted RBP15.06■□□□□ 0
DDX41-211ENST00000510171 ZBTB7CA1YPR0 619 aa15.05■□□□□ -0
DDX41-211ENST00000510171 NLRP6P59044 892 aa15.05■□□□□ -0
DDX41-211ENST00000510171 BRD4O60885 1362 aaPredicted RBP15.05■□□□□ -0
DDX41-211ENST00000510171 PPIP5K1Q6PFW1 1433 aa15.05■□□□□ -0
DDX41-211ENST00000510171 CRYBG1Q9Y4K1 1723 aa15.05■□□□□ -0
DDX41-211ENST00000510171 ARHGEF28Q8N1W1 1705 aaKnown RBP15.03■□□□□ -0
DDX41-211ENST00000510171 TOM1L2Q6ZVM7 507 aa15.02■□□□□ -0
DDX41-211ENST00000510171 SPON1Q9HCB6 807 aa15.02■□□□□ -0
DDX41-211ENST00000510171 ITSN1Q15811 1721 aa15.02□□□□□ -0.01
DDX41-211ENST00000510171 AATKQ6ZMQ8 1374 aa15.01□□□□□ -0.01
DDX41-211ENST00000510171 DDB1Q16531 1140 aa15.01□□□□□ -0.01
DDX41-211ENST00000510171 PPP1R1BQ9UD71 204 aaPredicted RBP15.01□□□□□ -0.01
DDX41-211ENST00000510171 PHRF1Q9P1Y6 1649 aaKnown RBP15.01□□□□□ -0.01
DDX41-211ENST00000510171 COL5A2P05997 1499 aaPredicted RBP15.01□□□□□ -0.01
DDX41-211ENST00000510171 CRB1P82279 1406 aa15□□□□□ -0.01
DDX41-211ENST00000510171 TNS1Q9HBL0 1735 aaKnown RBP15□□□□□ -0.01
DDX41-211ENST00000510171 NRKQ7Z2Y5 1582 aa15□□□□□ -0.01
DDX41-211ENST00000510171 PLSCR1O15162 318 aa15□□□□□ -0.01
DDX41-211ENST00000510171 KCNQ2O43526 872 aa15□□□□□ -0.01
DDX41-211ENST00000510171 ZNF692Q9BU19 519 aaPredicted RBP14.99□□□□□ -0.01
DDX41-211ENST00000510171 USP6P35125 1406 aa14.99□□□□□ -0.01
DDX41-211ENST00000510171 EVC2Q86UK5 1308 aa14.98□□□□□ -0.01
DDX41-211ENST00000510171 DCAF8L1A6NGE4 600 aa14.98□□□□□ -0.01
DDX41-211ENST00000510171 BCL11BQ9C0K0 894 aaPredicted RBP14.98□□□□□ -0.01
DDX41-211ENST00000510171 AXIN2Q9Y2T1 843 aa14.98□□□□□ -0.01
DDX41-211ENST00000510171 OVOS2A0A0G2JMS6 1433 aa14.98□□□□□ -0.01
DDX41-211ENST00000510171 OVOS2A0A0J9YW53 1432 aa14.98□□□□□ -0.01
DDX41-211ENST00000510171 OVOS2Q6IE36 1432 aa14.98□□□□□ -0.01
DDX41-211ENST00000510171 TOPAZ1Q8N9V7 1692 aa14.97□□□□□ -0.01
DDX41-211ENST00000510171 YY1P25490 414 aa14.97□□□□□ -0.01
DDX41-211ENST00000510171 KCNH5Q8NCM2 988 aa14.97□□□□□ -0.01
DDX41-211ENST00000510171 L3MBTL2Q969R5 705 aa14.97□□□□□ -0.01
DDX41-211ENST00000510171 CDCA7Q9BWT1 371 aaPredicted RBP14.97□□□□□ -0.01
DDX41-211ENST00000510171 LMO7Q8WWI1 1683 aa14.97□□□□□ -0.01
DDX41-211ENST00000510171 WDR17Q8IZU2 1322 aa14.96□□□□□ -0.01
DDX41-211ENST00000510171 CSB-PGBD3P0DP91 1061 aa14.96□□□□□ -0.01
DDX41-211ENST00000510171 ARHGEF25Q86VW2 580 aa14.96□□□□□ -0.01
DDX41-211ENST00000510171 KIAA1210Q9ULL0 1709 aa14.95□□□□□ -0.02
DDX41-211ENST00000510171 PTF1AQ7RTS3 328 aa14.95□□□□□ -0.02
DDX41-211ENST00000510171 MARCH10Q8NA82 808 aaPredicted RBP14.95□□□□□ -0.02
DDX41-211ENST00000510171 TTC21BQ7Z4L5 1316 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms