RNA–Protein interactions for RNA: ENST00000509535.5

RACK1-222, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-222	ENST00000509535	ABCC11	Q96J66	1382 aa		12.98	□□□□□ -0.33
RACK1-222	ENST00000509535	KCNQ2	O43526	872 aa		12.98	□□□□□ -0.33
RACK1-222	ENST00000509535	NBPF8	Q3BBV2	869 aa		12.98	□□□□□ -0.33
RACK1-222	ENST00000509535	NBPF14	Q5TI25	921 aa		12.98	□□□□□ -0.33
RACK1-222	ENST00000509535	RRBP1	Q9P2E9	1410 aa	Known RBP	12.97	□□□□□ -0.33
RACK1-222	ENST00000509535	CEP350	Q5VT06	3117 aa		12.97	□□□□□ -0.33
RACK1-222	ENST00000509535	CASZ1	Q86V15	1759 aa		12.97	□□□□□ -0.33
RACK1-222	ENST00000509535	ADGRF5	Q8IZF2	1346 aa		12.96	□□□□□ -0.33
RACK1-222	ENST00000509535	NRK	Q7Z2Y5	1582 aa		12.96	□□□□□ -0.33
RACK1-222	ENST00000509535	TMEM132E	Q6IEE7	984 aa		12.96	□□□□□ -0.33
RACK1-222	ENST00000509535	PPARGC1B	Q86YN6	1023 aa	Known RBP	12.96	□□□□□ -0.33
RACK1-222	ENST00000509535	SBF2	Q86WG5	1849 aa		12.95	□□□□□ -0.34
RACK1-222	ENST00000509535	MYOM1	P52179	1685 aa		12.95	□□□□□ -0.34
RACK1-222	ENST00000509535	YTHDC2	Q9H6S0	1430 aa	Known RBP	12.95	□□□□□ -0.34
RACK1-222	ENST00000509535	RGPD3	A6NKT7	1758 aa	Predicted RBP	12.94	□□□□□ -0.34
RACK1-222	ENST00000509535	RGPD4	Q7Z3J3	1758 aa		12.94	□□□□□ -0.34
RACK1-222	ENST00000509535	SPATA31A1	Q5TZJ5	1347 aa		12.93	□□□□□ -0.34
RACK1-222	ENST00000509535	C1QTNF8	P60827	252 aa		12.93	□□□□□ -0.34
RACK1-222	ENST00000509535	PMFBP1	Q8TBY8	1022 aa		12.93	□□□□□ -0.34
RACK1-222	ENST00000509535	PHRF1	Q9P1Y6	1649 aa	Known RBP	12.92	□□□□□ -0.34
RACK1-222	ENST00000509535	PRDM11	Q9NQV5	511 aa		12.92	□□□□□ -0.34
RACK1-222	ENST00000509535	PIK3C2G	O75747	1445 aa		12.9	□□□□□ -0.34
RACK1-222	ENST00000509535	ANKAR	Q7Z5J8	1434 aa		12.9	□□□□□ -0.34
RACK1-222	ENST00000509535	PDE3B	Q13370	1112 aa		12.9	□□□□□ -0.34
RACK1-222	ENST00000509535	PARP4	Q9UKK3	1724 aa	Known RBP	12.89	□□□□□ -0.35
RACK1-222	ENST00000509535	SIRT1	Q96EB6	747 aa		12.89	□□□□□ -0.35
RACK1-222	ENST00000509535	STRN4	Q9NRL3	753 aa		12.89	□□□□□ -0.35
RACK1-222	ENST00000509535	USP35	Q9P2H5	1018 aa		12.89	□□□□□ -0.35
RACK1-222	ENST00000509535	GPRASP1	Q5JY77	1395 aa		12.89	□□□□□ -0.35
RACK1-222	ENST00000509535	ANKRD30B	Q9BXX2	1392 aa		12.89	□□□□□ -0.35
RACK1-222	ENST00000509535	SAFB2	Q14151	953 aa	Known RBP eCLIP	12.88	□□□□□ -0.35
RACK1-222	ENST00000509535	RGL3	Q3MIN7	710 aa		12.88	□□□□□ -0.35
RACK1-222	ENST00000509535	KIAA0232	Q92628	1395 aa		12.87	□□□□□ -0.35
RACK1-222	ENST00000509535	CHRNA2	Q15822	529 aa		12.87	□□□□□ -0.35
RACK1-222	ENST00000509535	SPATA31E1	Q6ZUB1	1445 aa		12.87	□□□□□ -0.35
RACK1-222	ENST00000509535	ACIN1	Q9UKV3	1341 aa	Known RBP	12.87	□□□□□ -0.35
RACK1-222	ENST00000509535	ITSN1	Q15811	1721 aa		12.86	□□□□□ -0.35
RACK1-222	ENST00000509535	PEAK1	Q9H792	1746 aa		12.86	□□□□□ -0.35
RACK1-222	ENST00000509535	SLC4A1AP	Q9BWU0	796 aa	Known RBP	12.86	□□□□□ -0.35
RACK1-222	ENST00000509535	PAK3	O75914	559 aa	Predicted RBP	12.85	□□□□□ -0.35
RACK1-222	ENST00000509535	BARGIN	Q6ZT62	677 aa		12.85	□□□□□ -0.35
RACK1-222	ENST00000509535	PRAM1	Q96QH2	718 aa		12.85	□□□□□ -0.35
RACK1-222	ENST00000509535	PDGFD	Q9GZP0	370 aa	Predicted RBP	12.85	□□□□□ -0.35
RACK1-222	ENST00000509535	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.85	□□□□□ -0.35
RACK1-222	ENST00000509535	ZBTB7A	O95365	584 aa		12.84	□□□□□ -0.35
RACK1-222	ENST00000509535	SSH2	Q76I76	1423 aa		12.84	□□□□□ -0.35
RACK1-222	ENST00000509535	DHX57	Q6P158	1386 aa	Known RBP	12.83	□□□□□ -0.36
RACK1-222	ENST00000509535	PTGER2	P43116	358 aa		12.83	□□□□□ -0.36
RACK1-222	ENST00000509535	AKAP12	Q02952	1782 aa		12.83	□□□□□ -0.36
RACK1-222	ENST00000509535	LMO7	Q8WWI1	1683 aa		12.83	□□□□□ -0.36
RACK1-222	ENST00000509535	DLC1	Q96QB1	1528 aa		12.83	□□□□□ -0.36
RACK1-222	ENST00000509535	TULP4	Q9NRJ4	1543 aa		12.83	□□□□□ -0.36
RACK1-222	ENST00000509535	EVA1C	P58658	441 aa		12.82	□□□□□ -0.36
RACK1-222	ENST00000509535	ZC3H6	P61129	1189 aa	Known RBP	12.82	□□□□□ -0.36
RACK1-222	ENST00000509535	SYT17	Q9BSW7	474 aa		12.82	□□□□□ -0.36
RACK1-222	ENST00000509535	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.82	□□□□□ -0.36
RACK1-222	ENST00000509535	PRR36	Q9H6K5	1346 aa		12.82	□□□□□ -0.36
RACK1-222	ENST00000509535	GOLGB1	Q14789	3259 aa	Known RBP	12.81	□□□□□ -0.36
RACK1-222	ENST00000509535	LARP1	Q6PKG0	1096 aa	Known RBP	12.81	□□□□□ -0.36
RACK1-222	ENST00000509535	TCP11L2	Q8N4U5	519 aa		12.81	□□□□□ -0.36
RACK1-222	ENST00000509535	NGDN	Q8NEJ9	315 aa	Known RBP	12.81	□□□□□ -0.36
RACK1-222	ENST00000509535	HIRIP3	Q9BW71	556 aa	Predicted RBP	12.81	□□□□□ -0.36
RACK1-222	ENST00000509535	C14orf93	Q9H972	538 aa	Known RBP	12.81	□□□□□ -0.36
RACK1-222	ENST00000509535	POGK	Q9P215	609 aa		12.81	□□□□□ -0.36
RACK1-222	ENST00000509535	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.81	□□□□□ -0.36
RACK1-222	ENST00000509535	WNK3	Q9BYP7	1800 aa		12.81	□□□□□ -0.36
RACK1-222	ENST00000509535	LRRC37A3	O60309	1634 aa		12.8	□□□□□ -0.36
RACK1-222	ENST00000509535	OVOS2	A0A0G2JMS6	1433 aa		12.8	□□□□□ -0.36
RACK1-222	ENST00000509535	OVOS2	A0A0J9YW53	1432 aa		12.8	□□□□□ -0.36
RACK1-222	ENST00000509535	OVOS2	Q6IE36	1432 aa		12.8	□□□□□ -0.36
RACK1-222	ENST00000509535	PLSCR1	O15162	318 aa		12.8	□□□□□ -0.36
RACK1-222	ENST00000509535	GIGYF1	O75420	1035 aa	Predicted RBP	12.8	□□□□□ -0.36
RACK1-222	ENST00000509535	EIF3A	Q14152	1382 aa	Known RBP	12.8	□□□□□ -0.36
RACK1-222	ENST00000509535	C11orf95	C9JLR9	678 aa	Predicted RBP	12.79	□□□□□ -0.36
RACK1-222	ENST00000509535	CFAP70	Q5T0N1	1121 aa		12.79	□□□□□ -0.36
RACK1-222	ENST00000509535	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.79	□□□□□ -0.36
RACK1-222	ENST00000509535	ATP7B	P35670	1465 aa		12.78	□□□□□ -0.36
RACK1-222	ENST00000509535	NUTM2G	Q5VZR2	741 aa		12.77	□□□□□ -0.37
RACK1-222	ENST00000509535	THRAP3	Q9Y2W1	955 aa	Known RBP	12.77	□□□□□ -0.37
RACK1-222	ENST00000509535	MINK1	Q8N4C8	1332 aa	Predicted RBP	12.77	□□□□□ -0.37
RACK1-222	ENST00000509535	KAT6B	Q8WYB5	2073 aa		12.77	□□□□□ -0.37
RACK1-222	ENST00000509535	SHANK3	Q9BYB0	1731 aa		12.76	□□□□□ -0.37
RACK1-222	ENST00000509535	PTF1A	Q7RTS3	328 aa		12.76	□□□□□ -0.37
RACK1-222	ENST00000509535	PROM2	Q8N271	834 aa		12.75	□□□□□ -0.37
RACK1-222	ENST00000509535	ADGRB1	O14514	1584 aa		12.74	□□□□□ -0.37
RACK1-222	ENST00000509535	COL5A2	P05997	1499 aa	Predicted RBP	12.74	□□□□□ -0.37
RACK1-222	ENST00000509535	WASL	O00401	505 aa	Predicted RBP	12.74	□□□□□ -0.37
RACK1-222	ENST00000509535	SGIP1	Q9BQI5	828 aa		12.74	□□□□□ -0.37
RACK1-222	ENST00000509535	MTFR1L	Q9H019	292 aa		12.74	□□□□□ -0.37
RACK1-222	ENST00000509535	STK32B	Q9NY57	414 aa		12.74	□□□□□ -0.37
RACK1-222	ENST00000509535	TOPAZ1	Q8N9V7	1692 aa		12.73	□□□□□ -0.37
RACK1-222	ENST00000509535	CPD	O75976	1380 aa		12.73	□□□□□ -0.37
RACK1-222	ENST00000509535	TRAK1	Q9UPV9	953 aa		12.73	□□□□□ -0.37
RACK1-222	ENST00000509535	ARHGEF28	Q8N1W1	1705 aa	Known RBP	12.73	□□□□□ -0.37
RACK1-222	ENST00000509535	CRB1	P82279	1406 aa		12.72	□□□□□ -0.37
RACK1-222	ENST00000509535	MAP3K5	Q99683	1374 aa		12.72	□□□□□ -0.37
RACK1-222	ENST00000509535	RGPD5	Q99666	1765 aa		12.72	□□□□□ -0.37
RACK1-222	ENST00000509535	SLC15A2	Q16348	729 aa		12.72	□□□□□ -0.37
RACK1-222	ENST00000509535	GPR162	Q16538	588 aa		12.72	□□□□□ -0.37
RACK1-222	ENST00000509535	ARX	Q96QS3	562 aa		12.72	□□□□□ -0.37

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