RNA–Protein interactions for RNA: ENST00000509415.5

CALCOCO2-214, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-214ENST00000509415 PHRF1Q9P1Y6 1649 aaKnown RBP15.46■□□□□ 0.06
CALCOCO2-214ENST00000509415 ONECUT3O60422 494 aaPredicted RBP15.45■□□□□ 0.06
CALCOCO2-214ENST00000509415 SEPT12Q8IYM1 358 aa15.45■□□□□ 0.06
CALCOCO2-214ENST00000509415 CCDC9Q9Y3X0 531 aaKnown RBP15.45■□□□□ 0.06
CALCOCO2-214ENST00000509415 BLMP54132 1417 aaPredicted RBP15.44■□□□□ 0.06
CALCOCO2-214ENST00000509415 NUDT16Q96DE0 195 aaKnown RBP15.44■□□□□ 0.06
CALCOCO2-214ENST00000509415 ZRANB1Q9UGI0 708 aa15.43■□□□□ 0.06
CALCOCO2-214ENST00000509415 PAK3O75914 559 aaPredicted RBP15.42■□□□□ 0.06
CALCOCO2-214ENST00000509415 BTG4Q9NY30 223 aa15.42■□□□□ 0.06
CALCOCO2-214ENST00000509415 QRICH2Q9H0J4 1663 aa15.41■□□□□ 0.06
CALCOCO2-214ENST00000509415 CDK19Q9BWU1 502 aa15.41■□□□□ 0.06
CALCOCO2-214ENST00000509415 POLR3AO14802 1390 aaPredicted RBP15.4■□□□□ 0.06
CALCOCO2-214ENST00000509415 KRT27Q7Z3Y8 459 aa15.4■□□□□ 0.06
CALCOCO2-214ENST00000509415 THSD7AQ9UPZ6 1657 aa15.4■□□□□ 0.06
CALCOCO2-214ENST00000509415 RGPD1P0DJD0 1748 aa15.4■□□□□ 0.06
CALCOCO2-214ENST00000509415 SF3B2Q13435 895 aaKnown RBP15.38■□□□□ 0.05
CALCOCO2-214ENST00000509415 FAM98CQ17RN3 349 aaKnown RBP15.38■□□□□ 0.05
CALCOCO2-214ENST00000509415 NBPF1Q3BBV0 1214 aa15.38■□□□□ 0.05
CALCOCO2-214ENST00000509415 ACEP12821 1306 aa15.38■□□□□ 0.05
CALCOCO2-214ENST00000509415 A0A0G2JS52 829 aa15.37■□□□□ 0.05
CALCOCO2-214ENST00000509415 MYT1Q01538 1121 aa15.37■□□□□ 0.05
CALCOCO2-214ENST00000509415 PRDM11Q9NQV5 511 aa15.37■□□□□ 0.05
CALCOCO2-214ENST00000509415 CCDC61Q9Y6R9 512 aa15.37■□□□□ 0.05
CALCOCO2-214ENST00000509415 SPATA31A5Q5VU36 1347 aa15.37■□□□□ 0.05
CALCOCO2-214ENST00000509415 SPATA31A7Q8IWB4 1347 aa15.37■□□□□ 0.05
CALCOCO2-214ENST00000509415 TRPM1Q7Z4N2 1603 aa15.36■□□□□ 0.05
CALCOCO2-214ENST00000509415 PLEKHG3A1L390 1219 aa15.36■□□□□ 0.05
CALCOCO2-214ENST00000509415 DEFB132Q7Z7B7 95 aa15.36■□□□□ 0.05
CALCOCO2-214ENST00000509415 NRKQ7Z2Y5 1582 aa15.36■□□□□ 0.05
CALCOCO2-214ENST00000509415 KIAA0232Q92628 1395 aa15.36■□□□□ 0.05
CALCOCO2-214ENST00000509415 NBPF8Q3BBV2 869 aa15.35■□□□□ 0.05
CALCOCO2-214ENST00000509415 CENPJQ9HC77 1338 aaPredicted RBP15.35■□□□□ 0.05
CALCOCO2-214ENST00000509415 TNS1Q9HBL0 1735 aaKnown RBP15.34■□□□□ 0.05
CALCOCO2-214ENST00000509415 LMO7Q8WWI1 1683 aa15.33■□□□□ 0.04
CALCOCO2-214ENST00000509415 NUTM2GQ5VZR2 741 aa15.33■□□□□ 0.04
CALCOCO2-214ENST00000509415 PPIP5K1Q6PFW1 1433 aa15.33■□□□□ 0.04
CALCOCO2-214ENST00000509415 SRPK2P78362 688 aaKnown RBP15.32■□□□□ 0.04
CALCOCO2-214ENST00000509415 CHRNA2Q15822 529 aa15.32■□□□□ 0.04
CALCOCO2-214ENST00000509415 SPATA31A1Q5TZJ5 1347 aa15.32■□□□□ 0.04
CALCOCO2-214ENST00000509415 ZC3H6P61129 1189 aaKnown RBP15.31■□□□□ 0.04
CALCOCO2-214ENST00000509415 ABTB2Q8N961 1025 aa15.31■□□□□ 0.04
CALCOCO2-214ENST00000509415 AKAP12Q02952 1782 aa15.31■□□□□ 0.04
CALCOCO2-214ENST00000509415 USP19O94966 1318 aa15.3■□□□□ 0.04
CALCOCO2-214ENST00000509415 BAG6P46379 1132 aa15.3■□□□□ 0.04
CALCOCO2-214ENST00000509415 L3MBTL2Q969R5 705 aa15.3■□□□□ 0.04
CALCOCO2-214ENST00000509415 CAMTA1Q9Y6Y1 1673 aa15.29■□□□□ 0.04
CALCOCO2-214ENST00000509415 BRD4O60885 1362 aaPredicted RBP15.29■□□□□ 0.04
CALCOCO2-214ENST00000509415 CPDO75976 1380 aa15.29■□□□□ 0.04
CALCOCO2-214ENST00000509415 CABP2Q9NPB3 220 aa15.29■□□□□ 0.04
CALCOCO2-214ENST00000509415 STRN4Q9NRL3 753 aa15.29■□□□□ 0.04
CALCOCO2-214ENST00000509415 LRP5O75197 1615 aa15.28■□□□□ 0.04
CALCOCO2-214ENST00000509415 SSH2Q76I76 1423 aa15.28■□□□□ 0.04
CALCOCO2-214ENST00000509415 FAM182BQ5T319 152 aa15.28■□□□□ 0.04
CALCOCO2-214ENST00000509415 PIK3C2AO00443 1686 aa15.28■□□□□ 0.04
CALCOCO2-214ENST00000509415 PARP4Q9UKK3 1724 aaKnown RBP15.27■□□□□ 0.04
CALCOCO2-214ENST00000509415 NLRP13Q86W25 1043 aa15.27■□□□□ 0.04
CALCOCO2-214ENST00000509415 DISP2A7MBM2 1401 aa15.26■□□□□ 0.03
CALCOCO2-214ENST00000509415 ZEB1P37275 1124 aaPredicted RBP15.26■□□□□ 0.03
CALCOCO2-214ENST00000509415 EVA1CP58658 441 aa15.26■□□□□ 0.03
CALCOCO2-214ENST00000509415 RGPD5Q99666 1765 aa15.26■□□□□ 0.03
CALCOCO2-214ENST00000509415 USP6P35125 1406 aa15.26■□□□□ 0.03
CALCOCO2-214ENST00000509415 WNK3Q9BYP7 1800 aa15.25■□□□□ 0.03
CALCOCO2-214ENST00000509415 GCP02774 474 aa15.25■□□□□ 0.03
CALCOCO2-214ENST00000509415 SIN3AQ96ST3 1273 aa15.25■□□□□ 0.03
CALCOCO2-214ENST00000509415 PCGF6Q9BYE7 350 aa15.25■□□□□ 0.03
CALCOCO2-214ENST00000509415 CABP1Q9NZU7 370 aa15.25■□□□□ 0.03
CALCOCO2-214ENST00000509415 SLIT3O75094 1523 aa15.25■□□□□ 0.03
CALCOCO2-214ENST00000509415 COL18A1P39060 1754 aa15.25■□□□□ 0.03
CALCOCO2-214ENST00000509415 EVC2Q86UK5 1308 aa15.24■□□□□ 0.03
CALCOCO2-214ENST00000509415 BARGINQ6ZT62 677 aa15.24■□□□□ 0.03
CALCOCO2-214ENST00000509415 USP35Q9P2H5 1018 aa15.24■□□□□ 0.03
CALCOCO2-214ENST00000509415 ROCK2O75116 1388 aaKnown RBP15.24■□□□□ 0.03
CALCOCO2-214ENST00000509415 RREB1Q92766 1687 aa15.23■□□□□ 0.03
CALCOCO2-214ENST00000509415 COL5A2P05997 1499 aaPredicted RBP15.23■□□□□ 0.03
CALCOCO2-214ENST00000509415 SBF2Q86WG5 1849 aa15.23■□□□□ 0.03
CALCOCO2-214ENST00000509415 EN1Q05925 392 aaPredicted RBP15.23■□□□□ 0.03
CALCOCO2-214ENST00000509415 LARP1Q6PKG0 1096 aaKnown RBP15.23■□□□□ 0.03
CALCOCO2-214ENST00000509415 FAM196AQ6ZSG2 479 aa15.23■□□□□ 0.03
CALCOCO2-214ENST00000509415 NEUROD1Q13562 356 aa15.22■□□□□ 0.03
CALCOCO2-214ENST00000509415 TCP11L2Q8N4U5 519 aa15.22■□□□□ 0.03
CALCOCO2-214ENST00000509415 MON2Q7Z3U7 1717 aa15.22■□□□□ 0.03
CALCOCO2-214ENST00000509415 NLRP6P59044 892 aa15.21■□□□□ 0.03
CALCOCO2-214ENST00000509415 THRAP3Q9Y2W1 955 aaKnown RBP15.21■□□□□ 0.03
CALCOCO2-214ENST00000509415 NUP188Q5SRE5 1749 aa15.2■□□□□ 0.02
CALCOCO2-214ENST00000509415 PSDA5PKW4 1024 aaPredicted RBP15.2■□□□□ 0.02
CALCOCO2-214ENST00000509415 TRIM37O94972 964 aa15.2■□□□□ 0.02
CALCOCO2-214ENST00000509415 PDE3BQ13370 1112 aa15.2■□□□□ 0.02
CALCOCO2-214ENST00000509415 CRB1P82279 1406 aa15.19■□□□□ 0.02
CALCOCO2-214ENST00000509415 LRRC37A3O60309 1634 aa15.19■□□□□ 0.02
CALCOCO2-214ENST00000509415 AATKQ6ZMQ8 1374 aa15.19■□□□□ 0.02
CALCOCO2-214ENST00000509415 PEAK1Q9H792 1746 aa15.18■□□□□ 0.02
CALCOCO2-214ENST00000509415 EZH2Q15910 746 aaKnown RBP15.18■□□□□ 0.02
CALCOCO2-214ENST00000509415 ZNF692Q9BU19 519 aaPredicted RBP15.18■□□□□ 0.02
CALCOCO2-214ENST00000509415 PARD3Q8TEW0 1356 aa15.18■□□□□ 0.02
CALCOCO2-214ENST00000509415 RGPD3A6NKT7 1758 aaPredicted RBP15.17■□□□□ 0.02
CALCOCO2-214ENST00000509415 RGPD4Q7Z3J3 1758 aa15.17■□□□□ 0.02
CALCOCO2-214ENST00000509415 USP54Q70EL1 1684 aa15.17■□□□□ 0.02
CALCOCO2-214ENST00000509415 ZBTB7CA1YPR0 619 aa15.17■□□□□ 0.02
CALCOCO2-214ENST00000509415 CAMKK2Q96RR4 588 aa15.17■□□□□ 0.02
CALCOCO2-214ENST00000509415 TTC21BQ7Z4L5 1316 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms