RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 GPRASP1Q5JY77 1395 aa23.48■■□□□ 1.35
LMNA-222ENST00000508500 HAP1P54257 671 aaPredicted RBP23.46■■□□□ 1.35
LMNA-222ENST00000508500 NGDNQ8NEJ9 315 aaKnown RBP23.46■■□□□ 1.35
LMNA-222ENST00000508500 FAM83GA6ND36 823 aa23.45■■□□□ 1.34
LMNA-222ENST00000508500 ONECUT3O60422 494 aaPredicted RBP23.44■■□□□ 1.34
LMNA-222ENST00000508500 COL14A1Q05707 1796 aaKnown RBP23.43■■□□□ 1.34
LMNA-222ENST00000508500 PHRF1Q9P1Y6 1649 aaKnown RBP23.43■■□□□ 1.34
LMNA-222ENST00000508500 NEUROD1Q13562 356 aa23.42■■□□□ 1.34
LMNA-222ENST00000508500 VPS72Q15906 364 aa23.42■■□□□ 1.34
LMNA-222ENST00000508500 BLMP54132 1417 aaPredicted RBP23.42■■□□□ 1.34
LMNA-222ENST00000508500 POLR3AO14802 1390 aaPredicted RBP23.41■■□□□ 1.34
LMNA-222ENST00000508500 CENPJQ9HC77 1338 aaPredicted RBP23.4■■□□□ 1.34
LMNA-222ENST00000508500 CCDC61Q9Y6R9 512 aa23.4■■□□□ 1.34
LMNA-222ENST00000508500 ACEP12821 1306 aa23.39■■□□□ 1.34
LMNA-222ENST00000508500 PLEKHG3A1L390 1219 aa23.39■■□□□ 1.33
LMNA-222ENST00000508500 PAK3O75914 559 aaPredicted RBP23.39■■□□□ 1.33
LMNA-222ENST00000508500 NBPF8Q3BBV2 869 aa23.38■■□□□ 1.33
LMNA-222ENST00000508500 SEPT12Q8IYM1 358 aa23.36■■□□□ 1.33
LMNA-222ENST00000508500 CABP2Q9NPB3 220 aa23.36■■□□□ 1.33
LMNA-222ENST00000508500 ZRANB1Q9UGI0 708 aa23.36■■□□□ 1.33
LMNA-222ENST00000508500 BTG4Q9NY30 223 aa23.35■■□□□ 1.33
LMNA-222ENST00000508500 PPIP5K1Q6PFW1 1433 aa23.33■■□□□ 1.33
LMNA-222ENST00000508500 THSD7AQ9UPZ6 1657 aa23.33■■□□□ 1.33
LMNA-222ENST00000508500 SRPK2P78362 688 aaKnown RBP23.33■■□□□ 1.33
LMNA-222ENST00000508500 NUTM2GQ5VZR2 741 aa23.33■■□□□ 1.33
LMNA-222ENST00000508500 NRKQ7Z2Y5 1582 aa23.31■■□□□ 1.32
LMNA-222ENST00000508500 CCDC9Q9Y3X0 531 aaKnown RBP23.3■■□□□ 1.32
LMNA-222ENST00000508500 ROCK2O75116 1388 aaKnown RBP23.29■■□□□ 1.32
LMNA-222ENST00000508500 KIAA0232Q92628 1395 aa23.29■■□□□ 1.32
LMNA-222ENST00000508500 DEFB132Q7Z7B7 95 aa23.28■■□□□ 1.32
LMNA-222ENST00000508500 LRP5O75197 1615 aa23.28■■□□□ 1.32
LMNA-222ENST00000508500 AKAP12Q02952 1782 aa23.27■■□□□ 1.32
LMNA-222ENST00000508500 KRT27Q7Z3Y8 459 aa23.27■■□□□ 1.32
LMNA-222ENST00000508500 PRDM11Q9NQV5 511 aa23.27■■□□□ 1.32
LMNA-222ENST00000508500 CABP1Q9NZU7 370 aa23.27■■□□□ 1.32
LMNA-222ENST00000508500 TNS1Q9HBL0 1735 aaKnown RBP23.26■■□□□ 1.31
LMNA-222ENST00000508500 CHRNA2Q15822 529 aa23.26■■□□□ 1.31
LMNA-222ENST00000508500 RGPD1P0DJD0 1748 aa23.25■■□□□ 1.31
LMNA-222ENST00000508500 ZC3H6P61129 1189 aaKnown RBP23.25■■□□□ 1.31
LMNA-222ENST00000508500 ABTB2Q8N961 1025 aa23.25■■□□□ 1.31
LMNA-222ENST00000508500 SPATA31A5Q5VU36 1347 aa23.25■■□□□ 1.31
LMNA-222ENST00000508500 SPATA31A7Q8IWB4 1347 aa23.25■■□□□ 1.31
LMNA-222ENST00000508500 LMO7Q8WWI1 1683 aa23.25■■□□□ 1.31
LMNA-222ENST00000508500 FAM98CQ17RN3 349 aaKnown RBP23.24■■□□□ 1.31
LMNA-222ENST00000508500 USP19O94966 1318 aa23.24■■□□□ 1.31
LMNA-222ENST00000508500 USP6P35125 1406 aa23.24■■□□□ 1.31
LMNA-222ENST00000508500 PIK3C2AO00443 1686 aa23.23■■□□□ 1.31
LMNA-222ENST00000508500 SSH2Q76I76 1423 aa23.23■■□□□ 1.31
LMNA-222ENST00000508500 CAMTA1Q9Y6Y1 1673 aa23.22■■□□□ 1.31
LMNA-222ENST00000508500 EVC2Q86UK5 1308 aa23.22■■□□□ 1.31
LMNA-222ENST00000508500 TRIM26Q12899 539 aaPredicted RBP23.2■■□□□ 1.3
LMNA-222ENST00000508500 BRD4O60885 1362 aaPredicted RBP23.19■■□□□ 1.3
LMNA-222ENST00000508500 CPDO75976 1380 aa23.19■■□□□ 1.3
LMNA-222ENST00000508500 DISP2A7MBM2 1401 aa23.18■■□□□ 1.3
LMNA-222ENST00000508500 SPATA31A1Q5TZJ5 1347 aa23.18■■□□□ 1.3
LMNA-222ENST00000508500 NLRP13Q86W25 1043 aa23.18■■□□□ 1.3
LMNA-222ENST00000508500 SLIT3O75094 1523 aa23.18■■□□□ 1.3
LMNA-222ENST00000508500 COL18A1P39060 1754 aa23.17■■□□□ 1.3
LMNA-222ENST00000508500 GCP02774 474 aa23.17■■□□□ 1.3
LMNA-222ENST00000508500 STRN4Q9NRL3 753 aa23.17■■□□□ 1.3
LMNA-222ENST00000508500 MON2Q7Z3U7 1717 aa23.16■■□□□ 1.3
LMNA-222ENST00000508500 RGPD5Q99666 1765 aa23.16■■□□□ 1.3
LMNA-222ENST00000508500 TONSLQ96HA7 1378 aa23.15■■□□□ 1.3
LMNA-222ENST00000508500 A0A0G2JS52 829 aa23.15■■□□□ 1.3
LMNA-222ENST00000508500 MYT1Q01538 1121 aa23.15■■□□□ 1.3
LMNA-222ENST00000508500 SF3B2Q13435 895 aaKnown RBP23.15■■□□□ 1.3
LMNA-222ENST00000508500 SBNO2Q9Y2G9 1366 aa23.14■■□□□ 1.3
LMNA-222ENST00000508500 FAM182BQ5T319 152 aa23.14■■□□□ 1.29
LMNA-222ENST00000508500 CARD11Q9BXL7 1154 aa23.14■■□□□ 1.29
LMNA-222ENST00000508500 CPSF1Q10570 1443 aaKnown RBP23.14■■□□□ 1.29
LMNA-222ENST00000508500 NLRP6P59044 892 aa23.12■■□□□ 1.29
LMNA-222ENST00000508500 LARP1Q6PKG0 1096 aaKnown RBP23.11■■□□□ 1.29
LMNA-222ENST00000508500 TTC21BQ7Z4L5 1316 aa23.1■■□□□ 1.29
LMNA-222ENST00000508500 BAG6P46379 1132 aa23.1■■□□□ 1.29
LMNA-222ENST00000508500 COL5A2P05997 1499 aaPredicted RBP23.1■■□□□ 1.29
LMNA-222ENST00000508500 CD163L1Q9NR16 1453 aa23.1■■□□□ 1.29
LMNA-222ENST00000508500 EVA1CP58658 441 aa23.09■■□□□ 1.29
LMNA-222ENST00000508500 ZNF692Q9BU19 519 aaPredicted RBP23.09■■□□□ 1.29
LMNA-222ENST00000508500 USP35Q9P2H5 1018 aa23.08■■□□□ 1.29
LMNA-222ENST00000508500 RREB1Q92766 1687 aa23.08■■□□□ 1.29
LMNA-222ENST00000508500 PARP4Q9UKK3 1724 aaKnown RBP23.07■■□□□ 1.28
LMNA-222ENST00000508500 USP54Q70EL1 1684 aa23.06■■□□□ 1.28
LMNA-222ENST00000508500 BARGINQ6ZT62 677 aa23.06■■□□□ 1.28
LMNA-222ENST00000508500 WNK3Q9BYP7 1800 aa23.05■■□□□ 1.28
LMNA-222ENST00000508500 AATKQ6ZMQ8 1374 aa23.05■■□□□ 1.28
LMNA-222ENST00000508500 KTN1Q86UP2 1357 aaKnown RBP23.05■■□□□ 1.28
LMNA-222ENST00000508500 EN1Q05925 392 aaPredicted RBP23.05■■□□□ 1.28
LMNA-222ENST00000508500 TTC21AQ8NDW8 1320 aa23.04■■□□□ 1.28
LMNA-222ENST00000508500 NFAT5O94916 1531 aa23.03■■□□□ 1.28
LMNA-222ENST00000508500 ZBTB7CA1YPR0 619 aa23.03■■□□□ 1.28
LMNA-222ENST00000508500 PSDA5PKW4 1024 aaPredicted RBP23.03■■□□□ 1.28
LMNA-222ENST00000508500 AXIN2Q9Y2T1 843 aa23.03■■□□□ 1.28
LMNA-222ENST00000508500 NUP188Q5SRE5 1749 aa23.02■■□□□ 1.28
LMNA-222ENST00000508500 TCP11L2Q8N4U5 519 aa23.02■■□□□ 1.28
LMNA-222ENST00000508500 ARHGEF25Q86VW2 580 aa23.01■■□□□ 1.27
LMNA-222ENST00000508500 CAMKK2Q96RR4 588 aa23.01■■□□□ 1.27
LMNA-222ENST00000508500 TESK2Q96S53 571 aa23.01■■□□□ 1.27
LMNA-222ENST00000508500 SLC12A5Q9H2X9 1139 aa23.01■■□□□ 1.27
LMNA-222ENST00000508500 PEAK1Q9H792 1746 aa23.01■■□□□ 1.27
LMNA-222ENST00000508500 CRB1P82279 1406 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms