RNA–Protein interactions for RNA: ENST00000506891.1

TTC39B-205, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-205ENST00000506891 POLR3AO14802 1390 aaPredicted RBP17.24■□□□□ 0.35
TTC39B-205ENST00000506891 ATP7BP35670 1465 aa17.24■□□□□ 0.35
TTC39B-205ENST00000506891 VPS72Q15906 364 aa17.22■□□□□ 0.35
TTC39B-205ENST00000506891 BRD4O60885 1362 aaPredicted RBP17.22■□□□□ 0.35
TTC39B-205ENST00000506891 SLIT2O94813 1529 aa17.21■□□□□ 0.35
TTC39B-205ENST00000506891 CARD11Q9BXL7 1154 aa17.21■□□□□ 0.35
TTC39B-205ENST00000506891 PCGF6Q9BYE7 350 aa17.21■□□□□ 0.35
TTC39B-205ENST00000506891 CABP1Q9NZU7 370 aa17.21■□□□□ 0.35
TTC39B-205ENST00000506891 QRICH2Q9H0J4 1663 aa17.2■□□□□ 0.34
TTC39B-205ENST00000506891 ONECUT3O60422 494 aaPredicted RBP17.2■□□□□ 0.34
TTC39B-205ENST00000506891 PLEKHG5O94827 1062 aa17.2■□□□□ 0.34
TTC39B-205ENST00000506891 ZNF692Q9BU19 519 aaPredicted RBP17.2■□□□□ 0.34
TTC39B-205ENST00000506891 ABTB2Q8N961 1025 aa17.19■□□□□ 0.34
TTC39B-205ENST00000506891 TOPAZ1Q8N9V7 1692 aa17.19■□□□□ 0.34
TTC39B-205ENST00000506891 NLRP13Q86W25 1043 aa17.18■□□□□ 0.34
TTC39B-205ENST00000506891 RGS12O14924 1447 aa17.18■□□□□ 0.34
TTC39B-205ENST00000506891 PUS7Q96PZ0 661 aaKnown RBP17.17■□□□□ 0.34
TTC39B-205ENST00000506891 BTG4Q9NY30 223 aa17.16■□□□□ 0.34
TTC39B-205ENST00000506891 TRPM3Q9HCF6 1732 aaPredicted RBP17.16■□□□□ 0.34
TTC39B-205ENST00000506891 PPIP5K1Q6PFW1 1433 aa17.15■□□□□ 0.34
TTC39B-205ENST00000506891 CCDC125Q86Z20 511 aa17.15■□□□□ 0.34
TTC39B-205ENST00000506891 PRDM11Q9NQV5 511 aa17.15■□□□□ 0.34
TTC39B-205ENST00000506891 ATAD2Q6PL18 1390 aa17.15■□□□□ 0.34
TTC39B-205ENST00000506891 CCDC9Q9Y3X0 531 aaKnown RBP17.14■□□□□ 0.33
TTC39B-205ENST00000506891 ALS2Q96Q42 1657 aa17.13■□□□□ 0.33
TTC39B-205ENST00000506891 MARF1Q9Y4F3 1742 aaKnown RBP17.13■□□□□ 0.33
TTC39B-205ENST00000506891 NUTM2GQ5VZR2 741 aa17.13■□□□□ 0.33
TTC39B-205ENST00000506891 GCP02774 474 aa17.12■□□□□ 0.33
TTC39B-205ENST00000506891 SEPT12Q8IYM1 358 aa17.12■□□□□ 0.33
TTC39B-205ENST00000506891 ZC3H6P61129 1189 aaKnown RBP17.11■□□□□ 0.33
TTC39B-205ENST00000506891 NLRP6P59044 892 aa17.1■□□□□ 0.33
TTC39B-205ENST00000506891 USP19O94966 1318 aa17.1■□□□□ 0.33
TTC39B-205ENST00000506891 KIAA0232Q92628 1395 aa17.09■□□□□ 0.33
TTC39B-205ENST00000506891 NINLQ9Y2I6 1382 aa17.08■□□□□ 0.32
TTC39B-205ENST00000506891 SPATA31A5Q5VU36 1347 aa17.08■□□□□ 0.32
TTC39B-205ENST00000506891 SPATA31A7Q8IWB4 1347 aa17.08■□□□□ 0.32
TTC39B-205ENST00000506891 EVA1CP58658 441 aa17.08■□□□□ 0.32
TTC39B-205ENST00000506891 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.07■□□□□ 0.32
TTC39B-205ENST00000506891 USP6P35125 1406 aa17.07■□□□□ 0.32
TTC39B-205ENST00000506891 CPDO75976 1380 aa17.07■□□□□ 0.32
TTC39B-205ENST00000506891 TTC21BQ7Z4L5 1316 aa17.07■□□□□ 0.32
TTC39B-205ENST00000506891 TTC21AQ8NDW8 1320 aa17.07■□□□□ 0.32
TTC39B-205ENST00000506891 CHRNA2Q15822 529 aa17.07■□□□□ 0.32
TTC39B-205ENST00000506891 CCER1Q8TC90 406 aaPredicted RBP17.07■□□□□ 0.32
TTC39B-205ENST00000506891 SSH2Q76I76 1423 aa17.06■□□□□ 0.32
TTC39B-205ENST00000506891 KRT27Q7Z3Y8 459 aa17.06■□□□□ 0.32
TTC39B-205ENST00000506891 ABCA3Q99758 1704 aa17.06■□□□□ 0.32
TTC39B-205ENST00000506891 NWD2Q9ULI1 1742 aa17.05■□□□□ 0.32
TTC39B-205ENST00000506891 ST20-MTHFSA0A0A6YYL1 179 aa17.05■□□□□ 0.32
TTC39B-205ENST00000506891 FAM98CQ17RN3 349 aaKnown RBP17.05■□□□□ 0.32
TTC39B-205ENST00000506891 KCNH5Q8NCM2 988 aa17.05■□□□□ 0.32
TTC39B-205ENST00000506891 TESK2Q96S53 571 aa17.04■□□□□ 0.32
TTC39B-205ENST00000506891 CPSF1Q10570 1443 aaKnown RBP17.04■□□□□ 0.32
TTC39B-205ENST00000506891 SPATA31A1Q5TZJ5 1347 aa17.03■□□□□ 0.32
TTC39B-205ENST00000506891 HDGFL2Q7Z4V5 671 aaPredicted RBP17.03■□□□□ 0.32
TTC39B-205ENST00000506891 TMC1Q8TDI8 760 aa17.03■□□□□ 0.32
TTC39B-205ENST00000506891 STRN4Q9NRL3 753 aa17.03■□□□□ 0.32
TTC39B-205ENST00000506891 TERF2IPQ9NYB0 399 aa17.03■□□□□ 0.32
TTC39B-205ENST00000506891 CRYBG1Q9Y4K1 1723 aa17.02■□□□□ 0.32
TTC39B-205ENST00000506891 CDCA8Q53HL2 280 aa17.02■□□□□ 0.32
TTC39B-205ENST00000506891 BARGINQ6ZT62 677 aa17.02■□□□□ 0.32
TTC39B-205ENST00000506891 SLC12A5Q9H2X9 1139 aa17.02■□□□□ 0.32
TTC39B-205ENST00000506891 THRAP3Q9Y2W1 955 aaKnown RBP17.02■□□□□ 0.32
TTC39B-205ENST00000506891 GLI3P10071 1580 aa17.02■□□□□ 0.31
TTC39B-205ENST00000506891 KTN1Q86UP2 1357 aaKnown RBP17.02■□□□□ 0.31
TTC39B-205ENST00000506891 USP47Q96K76 1375 aa17.02■□□□□ 0.31
TTC39B-205ENST00000506891 A0A0G2JS52 829 aa17.01■□□□□ 0.31
TTC39B-205ENST00000506891 MYT1Q01538 1121 aa17.01■□□□□ 0.31
TTC39B-205ENST00000506891 COL14A1Q05707 1796 aaKnown RBP17.01■□□□□ 0.31
TTC39B-205ENST00000506891 SF3B2Q13435 895 aaKnown RBP17■□□□□ 0.31
TTC39B-205ENST00000506891 AATKQ6ZMQ8 1374 aa17■□□□□ 0.31
TTC39B-205ENST00000506891 AKAP12Q02952 1782 aa17■□□□□ 0.31
TTC39B-205ENST00000506891 ARHGEF25Q86VW2 580 aa16.99■□□□□ 0.31
TTC39B-205ENST00000506891 TCP11L2Q8N4U5 519 aa16.99■□□□□ 0.31
TTC39B-205ENST00000506891 TMF1P82094 1093 aa16.98■□□□□ 0.31
TTC39B-205ENST00000506891 LARP1Q6PKG0 1096 aaKnown RBP16.98■□□□□ 0.31
TTC39B-205ENST00000506891 PHRF1Q9P1Y6 1649 aaKnown RBP16.97■□□□□ 0.31
TTC39B-205ENST00000506891 USP31Q70CQ4 1352 aa16.97■□□□□ 0.31
TTC39B-205ENST00000506891 PLCH1Q4KWH8 1693 aa16.97■□□□□ 0.31
TTC39B-205ENST00000506891 BLMP54132 1417 aaPredicted RBP16.96■□□□□ 0.31
TTC39B-205ENST00000506891 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.96■□□□□ 0.31
TTC39B-205ENST00000506891 MON2Q7Z3U7 1717 aa16.96■□□□□ 0.3
TTC39B-205ENST00000506891 USP35Q9P2H5 1018 aa16.95■□□□□ 0.3
TTC39B-205ENST00000506891 ZBTB7CA1YPR0 619 aa16.94■□□□□ 0.3
TTC39B-205ENST00000506891 C11orf95C9JLR9 678 aaPredicted RBP16.94■□□□□ 0.3
TTC39B-205ENST00000506891 PDE3BQ13370 1112 aa16.94■□□□□ 0.3
TTC39B-205ENST00000506891 FAM196AQ6ZSG2 479 aa16.94■□□□□ 0.3
TTC39B-205ENST00000506891 AXIN2Q9Y2T1 843 aa16.94■□□□□ 0.3
TTC39B-205ENST00000506891 SLIT3O75094 1523 aa16.94■□□□□ 0.3
TTC39B-205ENST00000506891 EDC4Q6P2E9 1401 aaKnown RBP16.94■□□□□ 0.3
TTC39B-205ENST00000506891 CAMTA1Q9Y6Y1 1673 aa16.94■□□□□ 0.3
TTC39B-205ENST00000506891 NRKQ7Z2Y5 1582 aa16.94■□□□□ 0.3
TTC39B-205ENST00000506891 ZRANB1Q9UGI0 708 aa16.93■□□□□ 0.3
TTC39B-205ENST00000506891 CD163L1Q9NR16 1453 aa16.93■□□□□ 0.3
TTC39B-205ENST00000506891 USP54Q70EL1 1684 aa16.92■□□□□ 0.3
TTC39B-205ENST00000506891 NME9Q86XW9 330 aa16.92■□□□□ 0.3
TTC39B-205ENST00000506891 NRAPQ86VF7 1730 aa16.92■□□□□ 0.3
TTC39B-205ENST00000506891 PIK3C2AO00443 1686 aa16.91■□□□□ 0.3
TTC39B-205ENST00000506891 TOM1L2Q6ZVM7 507 aa16.91■□□□□ 0.3
TTC39B-205ENST00000506891 CDCA7Q9BWT1 371 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms