RNA–Protein interactions for RNA: ENST00000506089.1

SMARCAD1-205, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 4

Gene SMARCAD1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-205ENST00000506089 USP46P62068 366 aa8.14□□□□□ -1.11
SMARCAD1-205ENST00000506089 NUTM1Q86Y26 1132 aa8.14□□□□□ -1.11
SMARCAD1-205ENST00000506089 TMEM151AQ8N4L1 468 aa8.14□□□□□ -1.11
SMARCAD1-205ENST00000506089 PCDHGC3Q9UN70 934 aa8.14□□□□□ -1.11
SMARCAD1-205ENST00000506089 MOXD2PA6NHM9 499 aa8.13□□□□□ -1.11
SMARCAD1-205ENST00000506089 JUNDP17535 347 aa8.13□□□□□ -1.11
SMARCAD1-205ENST00000506089 MRPL14Q6P1L8 145 aaKnown RBP8.13□□□□□ -1.11
SMARCAD1-205ENST00000506089 SYMPKQ92797 1274 aaKnown RBP8.13□□□□□ -1.11
SMARCAD1-205ENST00000506089 PURBQ96QR8 312 aaKnown RBP8.13□□□□□ -1.11
SMARCAD1-205ENST00000506089 TLL2Q9Y6L7 1015 aa8.13□□□□□ -1.11
SMARCAD1-205ENST00000506089 GDF11O95390 407 aa8.12□□□□□ -1.11
SMARCAD1-205ENST00000506089 SH3BP2P78314 561 aa8.12□□□□□ -1.11
SMARCAD1-205ENST00000506089 RASSF7Q02833 373 aa8.12□□□□□ -1.11
SMARCAD1-205ENST00000506089 TBC1D2Q9BYX2 928 aa8.12□□□□□ -1.11
SMARCAD1-205ENST00000506089 NUDT12Q9BQG2 462 aa8.11□□□□□ -1.11
SMARCAD1-205ENST00000506089 FDX1P10109 184 aa8.1□□□□□ -1.11
SMARCAD1-205ENST00000506089 SCARF1Q14162 830 aa8.1□□□□□ -1.11
SMARCAD1-205ENST00000506089 KDM4CQ9H3R0 1056 aa8.1□□□□□ -1.11
SMARCAD1-205ENST00000506089 NNTQ13423 1086 aa8.09□□□□□ -1.11
SMARCAD1-205ENST00000506089 TIMP2P16035 220 aa8.08□□□□□ -1.12
SMARCAD1-205ENST00000506089 FAM117AQ9C073 453 aa8.08□□□□□ -1.12
SMARCAD1-205ENST00000506089 PCDHB15Q9Y5E8 787 aa8.08□□□□□ -1.12
SMARCAD1-205ENST00000506089 LINC01559Q495D7 138 aa8.07□□□□□ -1.12
SMARCAD1-205ENST00000506089 MYSM1Q5VVJ2 828 aa8.07□□□□□ -1.12
SMARCAD1-205ENST00000506089 RSBN1LQ6PCB5 846 aaPredicted RBP8.07□□□□□ -1.12
SMARCAD1-205ENST00000506089 WDR4P57081 412 aaKnown RBP8.06□□□□□ -1.12
SMARCAD1-205ENST00000506089 LIMD1Q9UGP4 676 aa8.06□□□□□ -1.12
SMARCAD1-205ENST00000506089 PLEKHG3A1L390 1219 aa8.05□□□□□ -1.12
SMARCAD1-205ENST00000506089 SPTLC1O15269 473 aa8.05□□□□□ -1.12
SMARCAD1-205ENST00000506089 MAN1A2O60476 641 aa8.05□□□□□ -1.12
SMARCAD1-205ENST00000506089 PPFIA3O75145 1194 aa8.05□□□□□ -1.12
SMARCAD1-205ENST00000506089 ADAMTS8Q9UP79 889 aa8.05□□□□□ -1.12
SMARCAD1-205ENST00000506089 ADH1CP00326 375 aa8.04□□□□□ -1.12
SMARCAD1-205ENST00000506089 BRPF1P55201 1214 aaPredicted RBP8.04□□□□□ -1.12
SMARCAD1-205ENST00000506089 KRT76Q01546 638 aa8.04□□□□□ -1.12
SMARCAD1-205ENST00000506089 RIC3Q7Z5B4 369 aa8.04□□□□□ -1.12
SMARCAD1-205ENST00000506089 C6orf229H3BNL8 230 aa8.03□□□□□ -1.12
SMARCAD1-205ENST00000506089 RETREG3Q86VR2 466 aa8.03□□□□□ -1.12
SMARCAD1-205ENST00000506089 CABLES1Q8TDN4 633 aa8.03□□□□□ -1.12
SMARCAD1-205ENST00000506089 KLF16Q9BXK1 252 aaPredicted RBP8.03□□□□□ -1.12
SMARCAD1-205ENST00000506089 RNF225M0QZC1 329 aaPredicted RBP8.02□□□□□ -1.13
SMARCAD1-205ENST00000506089 CCNYL3P0C7X3 344 aa8.02□□□□□ -1.13
SMARCAD1-205ENST00000506089 NEUROD2Q15784 382 aa8.02□□□□□ -1.13
SMARCAD1-205ENST00000506089 C6orf118Q5T5N4 469 aa8.02□□□□□ -1.13
SMARCAD1-205ENST00000506089 GPAT2Q6NUI2 795 aa8.02□□□□□ -1.13
SMARCAD1-205ENST00000506089 BAP1Q92560 729 aa8.02□□□□□ -1.13
SMARCAD1-205ENST00000506089 UNC93B1Q9H1C4 597 aa8.02□□□□□ -1.13
SMARCAD1-205ENST00000506089 GJA5P36382 358 aa8.01□□□□□ -1.13
SMARCAD1-205ENST00000506089 DIXDC1Q155Q3 683 aa8.01□□□□□ -1.13
SMARCAD1-205ENST00000506089 QPCTQ16769 361 aa8.01□□□□□ -1.13
SMARCAD1-205ENST00000506089 CSPP1Q1MSJ5 1256 aa8.01□□□□□ -1.13
SMARCAD1-205ENST00000506089 FBXO31Q5XUX0 539 aaPredicted RBP8.01□□□□□ -1.13
SMARCAD1-205ENST00000506089 POLR3EQ9NVU0 708 aa8.01□□□□□ -1.13
SMARCAD1-205ENST00000506089 HRCP23327 699 aa8□□□□□ -1.13
SMARCAD1-205ENST00000506089 MTMR2Q13614 643 aa8□□□□□ -1.13
SMARCAD1-205ENST00000506089 GPR161Q8N6U8 529 aaKnown RBP8□□□□□ -1.13
SMARCAD1-205ENST00000506089 CNTNAP3BQ96NU0 1288 aa8□□□□□ -1.13
SMARCAD1-205ENST00000506089 CNTNAP3Q9BZ76 1288 aa8□□□□□ -1.13
SMARCAD1-205ENST00000506089 ZFAND3Q9H8U3 227 aa8□□□□□ -1.13
SMARCAD1-205ENST00000506089 CFAP99D6REC4 459 aa7.99□□□□□ -1.13
SMARCAD1-205ENST00000506089 VARSP26640 1264 aaKnown RBP7.99□□□□□ -1.13
SMARCAD1-205ENST00000506089 CLK2P49760 499 aaKnown RBP7.99□□□□□ -1.13
SMARCAD1-205ENST00000506089 XP32Q5T750 250 aa7.99□□□□□ -1.13
SMARCAD1-205ENST00000506089 MPNDQ8N594 471 aa7.99□□□□□ -1.13
SMARCAD1-205ENST00000506089 ZNF511Q8NB15 262 aa7.99□□□□□ -1.13
SMARCAD1-205ENST00000506089 PRR7Q8TB68 274 aa7.99□□□□□ -1.13
SMARCAD1-205ENST00000506089 PROCA1Q8NCQ7 364 aaPredicted RBP7.98□□□□□ -1.13
SMARCAD1-205ENST00000506089 DDRGK1Q96HY6 314 aa7.98□□□□□ -1.13
SMARCAD1-205ENST00000506089 LILRB3O75022 631 aa7.97□□□□□ -1.13
SMARCAD1-205ENST00000506089 ZIC2O95409 532 aaPredicted RBP7.97□□□□□ -1.13
SMARCAD1-205ENST00000506089 TUSC1Q2TAM9 212 aa7.97□□□□□ -1.13
SMARCAD1-205ENST00000506089 SH3D19Q5HYK7 790 aa7.97□□□□□ -1.13
SMARCAD1-205ENST00000506089 RTL5Q5HYW3 569 aaPredicted RBP7.97□□□□□ -1.13
SMARCAD1-205ENST00000506089 ITPKCQ96DU7 683 aa7.97□□□□□ -1.13
SMARCAD1-205ENST00000506089 EVA1BQ9NVM1 165 aa7.97□□□□□ -1.13
SMARCAD1-205ENST00000506089 DNMT3AQ9Y6K1 912 aaPredicted RBP7.97□□□□□ -1.13
SMARCAD1-205ENST00000506089 IRS1P35568 1242 aa7.96□□□□□ -1.14
SMARCAD1-205ENST00000506089 PTPRNQ16849 979 aa7.96□□□□□ -1.14
SMARCAD1-205ENST00000506089 PRPF38BQ5VTL8 546 aaKnown RBP7.96□□□□□ -1.14
SMARCAD1-205ENST00000506089 RSPH6AQ9H0K4 717 aa7.96□□□□□ -1.14
SMARCAD1-205ENST00000506089 ZBTB3Q9H5J0 574 aa7.96□□□□□ -1.14
SMARCAD1-205ENST00000506089 KCNH2Q12809 1159 aa7.95□□□□□ -1.14
SMARCAD1-205ENST00000506089 SKIV2LQ15477 1246 aaKnown RBP7.95□□□□□ -1.14
SMARCAD1-205ENST00000506089 ZNF385CQ66K41 422 aaPredicted RBP7.95□□□□□ -1.14
SMARCAD1-205ENST00000506089 IL27Q8NEV9 243 aa7.95□□□□□ -1.14
SMARCAD1-205ENST00000506089 DNMT3LQ9UJW3 386 aa7.95□□□□□ -1.14
SMARCAD1-205ENST00000506089 SPDYE5A6NIY4 337 aa7.94□□□□□ -1.14
SMARCAD1-205ENST00000506089 NR3C2P08235 984 aa7.94□□□□□ -1.14
SMARCAD1-205ENST00000506089 BMP2P12643 396 aa7.94□□□□□ -1.14
SMARCAD1-205ENST00000506089 SVOPQ8N4V2 548 aa7.94□□□□□ -1.14
SMARCAD1-205ENST00000506089 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.94□□□□□ -1.14
SMARCAD1-205ENST00000506089 DESI1Q6ICB0 168 aa7.93□□□□□ -1.14
SMARCAD1-205ENST00000506089 LINC00528Q8N1L1 170 aa7.93□□□□□ -1.14
SMARCAD1-205ENST00000506089 COL25A1Q9BXS0 654 aaPredicted RBP7.93□□□□□ -1.14
SMARCAD1-205ENST00000506089 SOS2Q07890 1332 aaPredicted RBP7.93□□□□□ -1.14
SMARCAD1-205ENST00000506089 PER1O15534 1290 aaPredicted RBP7.92□□□□□ -1.14
SMARCAD1-205ENST00000506089 IGHA1P01876 353 aa7.92□□□□□ -1.14
SMARCAD1-205ENST00000506089 ARID5BQ14865 1188 aa7.92□□□□□ -1.14
SMARCAD1-205ENST00000506089 RNFT1Q5M7Z0 435 aa7.92□□□□□ -1.14
SMARCAD1-205ENST00000506089 FAM174AQ8TBP5 190 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms