RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 PPFIA3O75145 1194 aa7.41□□□□□ -1.22
TRAPPC13-208ENST00000505553 PTCRAQ6ISU1 281 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC13-208ENST00000505553 MPNDQ8N594 471 aa7.41□□□□□ -1.22
TRAPPC13-208ENST00000505553 PHOX2BQ99453 314 aa7.41□□□□□ -1.22
TRAPPC13-208ENST00000505553 WDR4P57081 412 aaKnown RBP7.4□□□□□ -1.22
TRAPPC13-208ENST00000505553 TIMP2P16035 220 aa7.39□□□□□ -1.23
TRAPPC13-208ENST00000505553 VARSP26640 1264 aaKnown RBP7.39□□□□□ -1.23
TRAPPC13-208ENST00000505553 TLL2Q9Y6L7 1015 aa7.39□□□□□ -1.23
TRAPPC13-208ENST00000505553 ZMYND10O75800 440 aa7.38□□□□□ -1.23
TRAPPC13-208ENST00000505553 HOXA2O43364 376 aa7.37□□□□□ -1.23
TRAPPC13-208ENST00000505553 XP32Q5T750 250 aa7.37□□□□□ -1.23
TRAPPC13-208ENST00000505553 KANK3Q6NY19 840 aa7.37□□□□□ -1.23
TRAPPC13-208ENST00000505553 RETREG3Q86VR2 466 aa7.37□□□□□ -1.23
TRAPPC13-208ENST00000505553 CCNYL3P0C7X3 344 aa7.36□□□□□ -1.23
TRAPPC13-208ENST00000505553 UPP2O95045 317 aa7.35□□□□□ -1.23
TRAPPC13-208ENST00000505553 SVOPQ8N4V2 548 aa7.35□□□□□ -1.23
TRAPPC13-208ENST00000505553 HLA-CQ95604 372 aa7.35□□□□□ -1.23
TRAPPC13-208ENST00000505553 CNTNAP3BQ96NU0 1288 aa7.35□□□□□ -1.23
TRAPPC13-208ENST00000505553 CNTNAP3Q9BZ76 1288 aa7.35□□□□□ -1.23
TRAPPC13-208ENST00000505553 MS4A1P11836 297 aa7.35□□□□□ -1.23
TRAPPC13-208ENST00000505553 IRS1P35568 1242 aa7.35□□□□□ -1.23
TRAPPC13-208ENST00000505553 UNC93B1Q9H1C4 597 aa7.35□□□□□ -1.23
TRAPPC13-208ENST00000505553 LINC01559Q495D7 138 aa7.34□□□□□ -1.23
TRAPPC13-208ENST00000505553 C6orf118Q5T5N4 469 aa7.34□□□□□ -1.23
TRAPPC13-208ENST00000505553 BARGINQ6ZT62 677 aa7.34□□□□□ -1.23
TRAPPC13-208ENST00000505553 MARSP56192 900 aaKnown RBP7.33□□□□□ -1.24
TRAPPC13-208ENST00000505553 MAP2K5Q13163 448 aa7.33□□□□□ -1.24
TRAPPC13-208ENST00000505553 ZNF511Q8NB15 262 aa7.33□□□□□ -1.24
TRAPPC13-208ENST00000505553 BAP1Q92560 729 aa7.33□□□□□ -1.24
TRAPPC13-208ENST00000505553 SYMPKQ92797 1274 aaKnown RBP7.33□□□□□ -1.24
TRAPPC13-208ENST00000505553 KLF16Q9BXK1 252 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC13-208ENST00000505553 IRF6O14896 467 aa7.32□□□□□ -1.24
TRAPPC13-208ENST00000505553 BMP2P12643 396 aa7.32□□□□□ -1.24
TRAPPC13-208ENST00000505553 KRT76Q01546 638 aa7.32□□□□□ -1.24
TRAPPC13-208ENST00000505553 PTPRNQ16849 979 aa7.32□□□□□ -1.24
TRAPPC13-208ENST00000505553 FAM174AQ8TBP5 190 aa7.32□□□□□ -1.24
TRAPPC13-208ENST00000505553 SCARF2Q96GP6 870 aaPredicted RBP7.32□□□□□ -1.24
TRAPPC13-208ENST00000505553 AK7Q96M32 723 aa7.32□□□□□ -1.24
TRAPPC13-208ENST00000505553 ZIC2O95409 532 aaPredicted RBP7.31□□□□□ -1.24
TRAPPC13-208ENST00000505553 GUCA2AQ02747 115 aa7.31□□□□□ -1.24
TRAPPC13-208ENST00000505553 ZNF385CQ66K41 422 aaPredicted RBP7.31□□□□□ -1.24
TRAPPC13-208ENST00000505553 EVA1BQ9NVM1 165 aa7.31□□□□□ -1.24
TRAPPC13-208ENST00000505553 MINK1Q8N4C8 1332 aaPredicted RBP7.31□□□□□ -1.24
TRAPPC13-208ENST00000505553 COL25A1Q9BXS0 654 aaPredicted RBP7.3□□□□□ -1.24
TRAPPC13-208ENST00000505553 SUPT5HO00267 1087 aaKnown RBP7.29□□□□□ -1.24
TRAPPC13-208ENST00000505553 KCNH2Q12809 1159 aa7.29□□□□□ -1.24
TRAPPC13-208ENST00000505553 GPR161Q8N6U8 529 aaKnown RBP7.29□□□□□ -1.24
TRAPPC13-208ENST00000505553 C6orf229H3BNL8 230 aa7.28□□□□□ -1.24
TRAPPC13-208ENST00000505553 NR5A1Q13285 461 aa7.28□□□□□ -1.24
TRAPPC13-208ENST00000505553 NUTM1Q86Y26 1132 aa7.28□□□□□ -1.24
TRAPPC13-208ENST00000505553 LINC00528Q8N1L1 170 aa7.28□□□□□ -1.24
TRAPPC13-208ENST00000505553 KRI1Q8N9T8 703 aaKnown RBP7.28□□□□□ -1.24
TRAPPC13-208ENST00000505553 SOS2Q07890 1332 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC13-208ENST00000505553 SPTLC1O15269 473 aa7.27□□□□□ -1.24
TRAPPC13-208ENST00000505553 MDM2Q00987 491 aaPredicted RBP7.27□□□□□ -1.24
TRAPPC13-208ENST00000505553 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.27□□□□□ -1.24
TRAPPC13-208ENST00000505553 NANOS1Q8WY41 292 aaKnown RBP7.27□□□□□ -1.24
TRAPPC13-208ENST00000505553 ITPKCQ96DU7 683 aa7.27□□□□□ -1.24
TRAPPC13-208ENST00000505553 CDK15Q96Q40 435 aa7.27□□□□□ -1.24
TRAPPC13-208ENST00000505553 ZFAND3Q9H8U3 227 aa7.27□□□□□ -1.24
TRAPPC13-208ENST00000505553 ADAM23O75077 832 aa7.27□□□□□ -1.25
TRAPPC13-208ENST00000505553 ARHGEF15O94989 841 aa7.27□□□□□ -1.25
TRAPPC13-208ENST00000505553 ARID5BQ14865 1188 aa7.27□□□□□ -1.25
TRAPPC13-208ENST00000505553 DNMT3LQ9UJW3 386 aa7.27□□□□□ -1.25
TRAPPC13-208ENST00000505553 MSTNO14793 375 aa7.26□□□□□ -1.25
TRAPPC13-208ENST00000505553 SLURP2P0DP57 97 aa7.26□□□□□ -1.25
TRAPPC13-208ENST00000505553 FDX1P10109 184 aa7.26□□□□□ -1.25
TRAPPC13-208ENST00000505553 MEIOBQ8N635 442 aa7.25□□□□□ -1.25
TRAPPC13-208ENST00000505553 CCDC102AQ96A19 550 aa7.25□□□□□ -1.25
TRAPPC13-208ENST00000505553 CLCN1P35523 988 aa7.24□□□□□ -1.25
TRAPPC13-208ENST00000505553 TSEN34Q9BSV6 310 aaKnown RBP7.24□□□□□ -1.25
TRAPPC13-208ENST00000505553 KRTAP4-8Q9BYQ9 185 aa7.24□□□□□ -1.25
TRAPPC13-208ENST00000505553 PTSQ03393 145 aa7.23□□□□□ -1.25
TRAPPC13-208ENST00000505553 GPCPD1Q9NPB8 672 aa7.23□□□□□ -1.25
TRAPPC13-208ENST00000505553 RNFT1Q5M7Z0 435 aa7.22□□□□□ -1.25
TRAPPC13-208ENST00000505553 WHAMMQ8TF30 809 aa7.22□□□□□ -1.25
TRAPPC13-208ENST00000505553 GPBP1L1Q9HC44 474 aaPredicted RBP7.22□□□□□ -1.25
TRAPPC13-208ENST00000505553 TTLL8A6PVC2 850 aa7.21□□□□□ -1.25
TRAPPC13-208ENST00000505553 MAP3K10Q02779 954 aa7.21□□□□□ -1.25
TRAPPC13-208ENST00000505553 DESI1Q6ICB0 168 aa7.21□□□□□ -1.25
TRAPPC13-208ENST00000505553 IL27Q8NEV9 243 aa7.21□□□□□ -1.25
TRAPPC13-208ENST00000505553 ZMYND15Q9H091 742 aa7.21□□□□□ -1.25
TRAPPC13-208ENST00000505553 KDM4CQ9H3R0 1056 aa7.21□□□□□ -1.25
TRAPPC13-208ENST00000505553 NR3C2P08235 984 aa7.2□□□□□ -1.26
TRAPPC13-208ENST00000505553 CTHP32929 405 aa7.2□□□□□ -1.26
TRAPPC13-208ENST00000505553 PCDHGC3Q9UN70 934 aa7.2□□□□□ -1.26
TRAPPC13-208ENST00000505553 SPDYE5A6NIY4 337 aa7.19□□□□□ -1.26
TRAPPC13-208ENST00000505553 PHF20L1A8MW92 1017 aa7.19□□□□□ -1.26
TRAPPC13-208ENST00000505553 TRIM66O15016 1216 aa7.19□□□□□ -1.26
TRAPPC13-208ENST00000505553 PDE4DQ08499 809 aa7.19□□□□□ -1.26
TRAPPC13-208ENST00000505553 SV2AQ7L0J3 742 aa7.19□□□□□ -1.26
TRAPPC13-208ENST00000505553 CCDC155Q8N6L0 562 aa7.19□□□□□ -1.26
TRAPPC13-208ENST00000505553 PRR7Q8TB68 274 aa7.19□□□□□ -1.26
TRAPPC13-208ENST00000505553 ENAMQ9NRM1 1142 aa7.19□□□□□ -1.26
TRAPPC13-208ENST00000505553 FAM217BQ9NTX9 383 aaPredicted RBP7.19□□□□□ -1.26
TRAPPC13-208ENST00000505553 AGERQ15109 404 aa7.18□□□□□ -1.26
TRAPPC13-208ENST00000505553 PLA2G4EQ3MJ16 856 aa7.18□□□□□ -1.26
TRAPPC13-208ENST00000505553 GALNT6Q8NCL4 622 aa7.18□□□□□ -1.26
TRAPPC13-208ENST00000505553 SPOCK3Q9BQ16 436 aa7.18□□□□□ -1.26
TRAPPC13-208ENST00000505553 RSPH6AQ9H0K4 717 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms