RNA–Protein interactions for RNA: ENST00000504643.5

MATR3-210, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 2,560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-210ENST00000504643 RGPD8O14715 1765 aaPredicted RBP11.25□□□□□ -0.61
MATR3-210ENST00000504643 PLEKHG5O94827 1062 aa11.24□□□□□ -0.61
MATR3-210ENST00000504643 ATP7BP35670 1465 aa11.24□□□□□ -0.61
MATR3-210ENST00000504643 SPATA31A5Q5VU36 1347 aa11.24□□□□□ -0.61
MATR3-210ENST00000504643 SPATA31A7Q8IWB4 1347 aa11.24□□□□□ -0.61
MATR3-210ENST00000504643 COL14A1Q05707 1796 aaKnown RBP11.24□□□□□ -0.61
MATR3-210ENST00000504643 FAM98CQ17RN3 349 aaKnown RBP11.23□□□□□ -0.61
MATR3-210ENST00000504643 NBPF8Q3BBV2 869 aa11.23□□□□□ -0.61
MATR3-210ENST00000504643 POLR3AO14802 1390 aaPredicted RBP11.23□□□□□ -0.61
MATR3-210ENST00000504643 C11orf95C9JLR9 678 aaPredicted RBP11.23□□□□□ -0.61
MATR3-210ENST00000504643 TRPM3Q9HCF6 1732 aaPredicted RBP11.22□□□□□ -0.61
MATR3-210ENST00000504643 PLCH1Q4KWH8 1693 aa11.22□□□□□ -0.61
MATR3-210ENST00000504643 NLRP13Q86W25 1043 aa11.22□□□□□ -0.61
MATR3-210ENST00000504643 ACEP12821 1306 aa11.22□□□□□ -0.61
MATR3-210ENST00000504643 EVA1CP58658 441 aa11.22□□□□□ -0.61
MATR3-210ENST00000504643 ALS2Q96Q42 1657 aa11.21□□□□□ -0.61
MATR3-210ENST00000504643 ITSN1Q15811 1721 aa11.21□□□□□ -0.61
MATR3-210ENST00000504643 KIAA1210Q9ULL0 1709 aa11.21□□□□□ -0.61
MATR3-210ENST00000504643 FAM196AQ6ZSG2 479 aa11.21□□□□□ -0.62
MATR3-210ENST00000504643 ABTB2Q8N961 1025 aa11.21□□□□□ -0.62
MATR3-210ENST00000504643 CENPJQ9HC77 1338 aaPredicted RBP11.2□□□□□ -0.62
MATR3-210ENST00000504643 DEFB132Q7Z7B7 95 aa11.2□□□□□ -0.62
MATR3-210ENST00000504643 ABCA3Q99758 1704 aa11.2□□□□□ -0.62
MATR3-210ENST00000504643 SPATA31A1Q5TZJ5 1347 aa11.2□□□□□ -0.62
MATR3-210ENST00000504643 SRPK2P78362 688 aaKnown RBP11.2□□□□□ -0.62
MATR3-210ENST00000504643 BARGINQ6ZT62 677 aa11.2□□□□□ -0.62
MATR3-210ENST00000504643 THRAP3Q9Y2W1 955 aaKnown RBP11.2□□□□□ -0.62
MATR3-210ENST00000504643 KIAA0232Q92628 1395 aa11.19□□□□□ -0.62
MATR3-210ENST00000504643 ARHGEF28Q8N1W1 1705 aaKnown RBP11.18□□□□□ -0.62
MATR3-210ENST00000504643 CPDO75976 1380 aa11.18□□□□□ -0.62
MATR3-210ENST00000504643 ZC3H6P61129 1189 aaKnown RBP11.18□□□□□ -0.62
MATR3-210ENST00000504643 PDE3BQ13370 1112 aa11.18□□□□□ -0.62
MATR3-210ENST00000504643 ZNF692Q9BU19 519 aaPredicted RBP11.18□□□□□ -0.62
MATR3-210ENST00000504643 STRN4Q9NRL3 753 aa11.17□□□□□ -0.62
MATR3-210ENST00000504643 BRWD3Q6RI45 1802 aa11.17□□□□□ -0.62
MATR3-210ENST00000504643 NRAPQ86VF7 1730 aa11.17□□□□□ -0.62
MATR3-210ENST00000504643 PARD3Q8TEW0 1356 aa11.17□□□□□ -0.62
MATR3-210ENST00000504643 NBPF1Q3BBV0 1214 aa11.17□□□□□ -0.62
MATR3-210ENST00000504643 DISP2A7MBM2 1401 aa11.16□□□□□ -0.62
MATR3-210ENST00000504643 USP19O94966 1318 aa11.16□□□□□ -0.62
MATR3-210ENST00000504643 EVC2Q86UK5 1308 aa11.16□□□□□ -0.62
MATR3-210ENST00000504643 GCP02774 474 aa11.16□□□□□ -0.62
MATR3-210ENST00000504643 TCP11L2Q8N4U5 519 aa11.16□□□□□ -0.62
MATR3-210ENST00000504643 CHRNA2Q15822 529 aa11.16□□□□□ -0.62
MATR3-210ENST00000504643 PPIP5K1Q6PFW1 1433 aa11.15□□□□□ -0.63
MATR3-210ENST00000504643 NUTM2GQ5VZR2 741 aa11.15□□□□□ -0.63
MATR3-210ENST00000504643 EN1Q05925 392 aaPredicted RBP11.14□□□□□ -0.63
MATR3-210ENST00000504643 SSH2Q76I76 1423 aa11.14□□□□□ -0.63
MATR3-210ENST00000504643 CABP2Q9NPB3 220 aa11.14□□□□□ -0.63
MATR3-210ENST00000504643 KCNH5Q8NCM2 988 aa11.13□□□□□ -0.63
MATR3-210ENST00000504643 L3MBTL2Q969R5 705 aa11.13□□□□□ -0.63
MATR3-210ENST00000504643 CABP1Q9NZU7 370 aa11.13□□□□□ -0.63
MATR3-210ENST00000504643 CRYBG1Q9Y4K1 1723 aa11.13□□□□□ -0.63
MATR3-210ENST00000504643 THSD7AQ9UPZ6 1657 aa11.13□□□□□ -0.63
MATR3-210ENST00000504643 NLRP6P59044 892 aa11.13□□□□□ -0.63
MATR3-210ENST00000504643 NBPF14Q5TI25 921 aa11.13□□□□□ -0.63
MATR3-210ENST00000504643 CDCA7Q9BWT1 371 aaPredicted RBP11.13□□□□□ -0.63
MATR3-210ENST00000504643 RGPD1P0DJD0 1748 aa11.12□□□□□ -0.63
MATR3-210ENST00000504643 TOPAZ1Q8N9V7 1692 aa11.12□□□□□ -0.63
MATR3-210ENST00000504643 APBA3O96018 575 aa11.12□□□□□ -0.63
MATR3-210ENST00000504643 AATKQ6ZMQ8 1374 aa11.12□□□□□ -0.63
MATR3-210ENST00000504643 TRIM37O94972 964 aa11.11□□□□□ -0.63
MATR3-210ENST00000504643 LARP1Q6PKG0 1096 aaKnown RBP11.11□□□□□ -0.63
MATR3-210ENST00000504643 CAMKK2Q96RR4 588 aa11.11□□□□□ -0.63
MATR3-210ENST00000504643 USP35Q9P2H5 1018 aa11.11□□□□□ -0.63
MATR3-210ENST00000504643 PHRF1Q9P1Y6 1649 aaKnown RBP11.11□□□□□ -0.63
MATR3-210ENST00000504643 USP6P35125 1406 aa11.11□□□□□ -0.63
MATR3-210ENST00000504643 TTC21AQ8NDW8 1320 aa11.11□□□□□ -0.63
MATR3-210ENST00000504643 EP400Q96L91 3159 aa11.1□□□□□ -0.63
MATR3-210ENST00000504643 SLC24A1O60721 1099 aa11.1□□□□□ -0.63
MATR3-210ENST00000504643 LRP5O75197 1615 aa11.1□□□□□ -0.63
MATR3-210ENST00000504643 CRB1P82279 1406 aa11.09□□□□□ -0.63
MATR3-210ENST00000504643 ROCK2O75116 1388 aaKnown RBP11.09□□□□□ -0.63
MATR3-210ENST00000504643 EZH2Q15910 746 aaKnown RBP11.09□□□□□ -0.63
MATR3-210ENST00000504643 FAM182BQ5T319 152 aa11.09□□□□□ -0.63
MATR3-210ENST00000504643 CAMTA1Q9Y6Y1 1673 aa11.09□□□□□ -0.63
MATR3-210ENST00000504643 PSDA5PKW4 1024 aaPredicted RBP11.09□□□□□ -0.63
MATR3-210ENST00000504643 NRKQ7Z2Y5 1582 aa11.08□□□□□ -0.64
MATR3-210ENST00000504643 R3HDM1Q15032 1099 aaKnown RBP11.08□□□□□ -0.64
MATR3-210ENST00000504643 TOM1L2Q6ZVM7 507 aa11.08□□□□□ -0.64
MATR3-210ENST00000504643 DDB1Q16531 1140 aa11.07□□□□□ -0.64
MATR3-210ENST00000504643 COL5A2P05997 1499 aaPredicted RBP11.07□□□□□ -0.64
MATR3-210ENST00000504643 TTC21BQ7Z4L5 1316 aa11.07□□□□□ -0.64
MATR3-210ENST00000504643 NEUROD1Q13562 356 aa11.07□□□□□ -0.64
MATR3-210ENST00000504643 PUS7Q96PZ0 661 aaKnown RBP11.07□□□□□ -0.64
MATR3-210ENST00000504643 PLSCR1O15162 318 aa11.06□□□□□ -0.64
MATR3-210ENST00000504643 WDR17Q8IZU2 1322 aa11.06□□□□□ -0.64
MATR3-210ENST00000504643 LMO7Q8WWI1 1683 aa11.06□□□□□ -0.64
MATR3-210ENST00000504643 ARHGEF25Q86VW2 580 aa11.06□□□□□ -0.64
MATR3-210ENST00000504643 SBNO2Q9Y2G9 1366 aa11.06□□□□□ -0.64
MATR3-210ENST00000504643 SLIT3O75094 1523 aa11.05□□□□□ -0.64
MATR3-210ENST00000504643 ZBTB7CA1YPR0 619 aa11.05□□□□□ -0.64
MATR3-210ENST00000504643 SIN3AQ96ST3 1273 aa11.05□□□□□ -0.64
MATR3-210ENST00000504643 QRICH2Q9H0J4 1663 aa11.05□□□□□ -0.64
MATR3-210ENST00000504643 OVOS2A0A0G2JMS6 1433 aa11.05□□□□□ -0.64
MATR3-210ENST00000504643 OVOS2A0A0J9YW53 1432 aa11.05□□□□□ -0.64
MATR3-210ENST00000504643 OVOS2Q6IE36 1432 aa11.05□□□□□ -0.64
MATR3-210ENST00000504643 CARD10Q9BWT7 1032 aa11.05□□□□□ -0.64
MATR3-210ENST00000504643 BCL11BQ9C0K0 894 aaPredicted RBP11.04□□□□□ -0.64
MATR3-210ENST00000504643 TRPM1Q7Z4N2 1603 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms