RNA–Protein interactions for RNA: ENST00000504010.5

NR1I3-219, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-219ENST00000504010 UTRNP46939 3433 aa12.91□□□□□ -0.34
NR1I3-219ENST00000504010 ABCA3Q99758 1704 aa12.91□□□□□ -0.34
NR1I3-219ENST00000504010 TRAK1Q9UPV9 953 aa12.9□□□□□ -0.34
NR1I3-219ENST00000504010 NINLQ9Y2I6 1382 aa12.9□□□□□ -0.34
NR1I3-219ENST00000504010 NRAPQ86VF7 1730 aa12.9□□□□□ -0.34
NR1I3-219ENST00000504010 CEP350Q5VT06 3117 aa12.9□□□□□ -0.34
NR1I3-219ENST00000504010 FAM83GA6ND36 823 aa12.89□□□□□ -0.35
NR1I3-219ENST00000504010 SAFB2Q14151 953 aaKnown RBP eCLIP12.89□□□□□ -0.35
NR1I3-219ENST00000504010 CAMKK2Q96RR4 588 aa12.89□□□□□ -0.35
NR1I3-219ENST00000504010 KNDC1Q76NI1 1749 aa12.88□□□□□ -0.35
NR1I3-219ENST00000504010 NUTM2FA1L443 756 aa12.88□□□□□ -0.35
NR1I3-219ENST00000504010 EZH2Q15910 746 aaKnown RBP12.88□□□□□ -0.35
NR1I3-219ENST00000504010 WAPLQ7Z5K2 1190 aa12.88□□□□□ -0.35
NR1I3-219ENST00000504010 CABLES1Q8TDN4 633 aa12.88□□□□□ -0.35
NR1I3-219ENST00000504010 ABCC11Q96J66 1382 aa12.88□□□□□ -0.35
NR1I3-219ENST00000504010 COL14A1Q05707 1796 aaKnown RBP12.87□□□□□ -0.35
NR1I3-219ENST00000504010 THSD7AQ9UPZ6 1657 aa12.87□□□□□ -0.35
NR1I3-219ENST00000504010 NBPF14Q5TI25 921 aa12.87□□□□□ -0.35
NR1I3-219ENST00000504010 FAM196AQ6ZSG2 479 aa12.87□□□□□ -0.35
NR1I3-219ENST00000504010 BTG4Q9NY30 223 aa12.87□□□□□ -0.35
NR1I3-219ENST00000504010 PPP1R1BQ9UD71 204 aaPredicted RBP12.87□□□□□ -0.35
NR1I3-219ENST00000504010 PHF8Q9UPP1 1060 aa12.87□□□□□ -0.35
NR1I3-219ENST00000504010 TRPM1Q7Z4N2 1603 aa12.87□□□□□ -0.35
NR1I3-219ENST00000504010 SPATA31A5Q5VU36 1347 aa12.87□□□□□ -0.35
NR1I3-219ENST00000504010 SPATA31A7Q8IWB4 1347 aa12.87□□□□□ -0.35
NR1I3-219ENST00000504010 ROCK2O75116 1388 aaKnown RBP12.86□□□□□ -0.35
NR1I3-219ENST00000504010 PLEKHH1Q9ULM0 1364 aa12.86□□□□□ -0.35
NR1I3-219ENST00000504010 SPON1Q9HCB6 807 aa12.86□□□□□ -0.35
NR1I3-219ENST00000504010 YTHDC2Q9H6S0 1430 aaKnown RBP12.86□□□□□ -0.35
NR1I3-219ENST00000504010 ADGRB1O14514 1584 aa12.86□□□□□ -0.35
NR1I3-219ENST00000504010 IFFO2Q5TF58 517 aa12.85□□□□□ -0.35
NR1I3-219ENST00000504010 SIRT1Q96EB6 747 aa12.85□□□□□ -0.35
NR1I3-219ENST00000504010 STAC3Q96MF2 364 aa12.85□□□□□ -0.35
NR1I3-219ENST00000504010 RREB1Q92766 1687 aa12.85□□□□□ -0.35
NR1I3-219ENST00000504010 HOXD11P31277 338 aaPredicted RBP12.84□□□□□ -0.35
NR1I3-219ENST00000504010 LMOD2Q6P5Q4 547 aa12.84□□□□□ -0.35
NR1I3-219ENST00000504010 CARD11Q9BXL7 1154 aa12.84□□□□□ -0.35
NR1I3-219ENST00000504010 TIMELESSQ9UNS1 1208 aa12.84□□□□□ -0.35
NR1I3-219ENST00000504010 TRIM37O94972 964 aa12.83□□□□□ -0.36
NR1I3-219ENST00000504010 APBA3O96018 575 aa12.83□□□□□ -0.36
NR1I3-219ENST00000504010 FAM182BQ5T319 152 aa12.83□□□□□ -0.36
NR1I3-219ENST00000504010 PRAM1Q96QH2 718 aa12.83□□□□□ -0.36
NR1I3-219ENST00000504010 HIRIP3Q9BW71 556 aaPredicted RBP12.83□□□□□ -0.36
NR1I3-219ENST00000504010 RGPD8O14715 1765 aaPredicted RBP12.83□□□□□ -0.36
NR1I3-219ENST00000504010 NUP188Q5SRE5 1749 aa12.82□□□□□ -0.36
NR1I3-219ENST00000504010 KCNQ2O43526 872 aa12.82□□□□□ -0.36
NR1I3-219ENST00000504010 POGKQ9P215 609 aa12.81□□□□□ -0.36
NR1I3-219ENST00000504010 KIAA1210Q9ULL0 1709 aa12.81□□□□□ -0.36
NR1I3-219ENST00000504010 MINK1Q8N4C8 1332 aaPredicted RBP12.81□□□□□ -0.36
NR1I3-219ENST00000504010 ANKARQ7Z5J8 1434 aa12.79□□□□□ -0.36
NR1I3-219ENST00000504010 C11orf95C9JLR9 678 aaPredicted RBP12.79□□□□□ -0.36
NR1I3-219ENST00000504010 PLEKHG5O94827 1062 aa12.79□□□□□ -0.36
NR1I3-219ENST00000504010 ZNF784Q8NCA9 323 aaPredicted RBP12.79□□□□□ -0.36
NR1I3-219ENST00000504010 SPATA31A1Q5TZJ5 1347 aa12.79□□□□□ -0.36
NR1I3-219ENST00000504010 ALS2Q96Q42 1657 aa12.78□□□□□ -0.36
NR1I3-219ENST00000504010 SENP3-EIF4A1A0A087X0R7 540 aa12.78□□□□□ -0.36
NR1I3-219ENST00000504010 TRPM3Q9HCF6 1732 aaPredicted RBP12.78□□□□□ -0.36
NR1I3-219ENST00000504010 ARHGEF28Q8N1W1 1705 aaKnown RBP12.77□□□□□ -0.36
NR1I3-219ENST00000504010 GPRASP1Q5JY77 1395 aa12.77□□□□□ -0.37
NR1I3-219ENST00000504010 ZBTB22O15209 634 aa12.76□□□□□ -0.37
NR1I3-219ENST00000504010 C1QTNF8P60827 252 aa12.76□□□□□ -0.37
NR1I3-219ENST00000504010 PDE3BQ13370 1112 aa12.76□□□□□ -0.37
NR1I3-219ENST00000504010 PRDM11Q9NQV5 511 aa12.76□□□□□ -0.37
NR1I3-219ENST00000504010 CHD4Q14839 1912 aa12.76□□□□□ -0.37
NR1I3-219ENST00000504010 ST20-MTHFSA0A0A6YYL1 179 aa12.75□□□□□ -0.37
NR1I3-219ENST00000504010 HSPA5P11021 654 aaKnown RBP12.75□□□□□ -0.37
NR1I3-219ENST00000504010 EIF3AQ14152 1382 aaKnown RBP12.75□□□□□ -0.37
NR1I3-219ENST00000504010 BARGINQ6ZT62 677 aa12.75□□□□□ -0.37
NR1I3-219ENST00000504010 CENPJQ9HC77 1338 aaPredicted RBP12.75□□□□□ -0.37
NR1I3-219ENST00000504010 RGPD3A6NKT7 1758 aaPredicted RBP12.74□□□□□ -0.37
NR1I3-219ENST00000504010 RGPD4Q7Z3J3 1758 aa12.74□□□□□ -0.37
NR1I3-219ENST00000504010 CRYBG1Q9Y4K1 1723 aa12.74□□□□□ -0.37
NR1I3-219ENST00000504010 CAMTA1Q9Y6Y1 1673 aa12.74□□□□□ -0.37
NR1I3-219ENST00000504010 USP47Q96K76 1375 aa12.74□□□□□ -0.37
NR1I3-219ENST00000504010 DLC1Q96QB1 1528 aa12.73□□□□□ -0.37
NR1I3-219ENST00000504010 GOLGB1Q14789 3259 aaKnown RBP12.73□□□□□ -0.37
NR1I3-219ENST00000504010 PMFBP1Q8TBY8 1022 aa12.73□□□□□ -0.37
NR1I3-219ENST00000504010 QRICH2Q9H0J4 1663 aa12.72□□□□□ -0.37
NR1I3-219ENST00000504010 KIAA0232Q92628 1395 aa12.7□□□□□ -0.38
NR1I3-219ENST00000504010 PLSCR1O15162 318 aa12.7□□□□□ -0.38
NR1I3-219ENST00000504010 ZEB1P37275 1124 aaPredicted RBP12.7□□□□□ -0.38
NR1I3-219ENST00000504010 POLR3GLQ9BT43 218 aa12.7□□□□□ -0.38
NR1I3-219ENST00000504010 CDK19Q9BWU1 502 aa12.7□□□□□ -0.38
NR1I3-219ENST00000504010 CABP2Q9NPB3 220 aa12.7□□□□□ -0.38
NR1I3-219ENST00000504010 THRAP3Q9Y2W1 955 aaKnown RBP12.7□□□□□ -0.38
NR1I3-219ENST00000504010 CASZ1Q86V15 1759 aa12.7□□□□□ -0.38
NR1I3-219ENST00000504010 NRKQ7Z2Y5 1582 aa12.69□□□□□ -0.38
NR1I3-219ENST00000504010 EIF4G2P78344 907 aaKnown RBP eCLIP12.69□□□□□ -0.38
NR1I3-219ENST00000504010 STRN4Q9NRL3 753 aa12.69□□□□□ -0.38
NR1I3-219ENST00000504010 WASLO00401 505 aaPredicted RBP12.68□□□□□ -0.38
NR1I3-219ENST00000504010 EVA1CP58658 441 aa12.68□□□□□ -0.38
NR1I3-219ENST00000504010 SRPK2P78362 688 aaKnown RBP12.68□□□□□ -0.38
NR1I3-219ENST00000504010 TCP11L2Q8N4U5 519 aa12.68□□□□□ -0.38
NR1I3-219ENST00000504010 TESK2Q96S53 571 aa12.68□□□□□ -0.38
NR1I3-219ENST00000504010 SSH2Q76I76 1423 aa12.68□□□□□ -0.38
NR1I3-219ENST00000504010 PRR36Q9H6K5 1346 aa12.67□□□□□ -0.38
NR1I3-219ENST00000504010 PAK3O75914 559 aaPredicted RBP12.67□□□□□ -0.38
NR1I3-219ENST00000504010 PARP4Q9UKK3 1724 aaKnown RBP12.67□□□□□ -0.38
NR1I3-219ENST00000504010 TULP4Q9NRJ4 1543 aa12.67□□□□□ -0.38
NR1I3-219ENST00000504010 PHRF1Q9P1Y6 1649 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms